[med-svn] [examl] 01/02: Add parse-examl manpage

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository examl.

commit 45248af532e8c8a7966ba27bac22f15373076576
Author: Andreas Tille <tille at debian.org>
Date:   Fri Feb 17 14:13:01 2017 +0100

    Add parse-examl manpage
---
 debian/parse-examl.1 | 32 ++++++++++++++++++++++++++++++++
 1 file changed, 32 insertions(+)

diff --git a/debian/parse-examl.1 b/debian/parse-examl.1
new file mode 100644
index 0000000..e359d4d
--- /dev/null
+++ b/debian/parse-examl.1
@@ -0,0 +1,32 @@
+.TH PARSE-EXAML "1" "February 2017" "parse-examl 3.0.18" "User Commands"
+.SH NAME
+parse-examl \- transform an alignment file in relaxed phylip format into a binary file format that can be read by ExaML
+.SH SYNOPSIS
+.B parse\-examl
+\fB\-s\fR sequenceFileName
+\fB\-n\fR outputFileName
+\fB\-m\fR substitutionModel
+[\-c]
+[\-q]
+[\-h]
+.SH OPTIONS
+.TP
+\fB\-m\fR Model of
+Nucleotide or Amino Acid Substitution:
+.IP
+For Binary data use: BIN
+For DNA data use:    DNA
+For AA data use:     PROT
+.TP
+\fB\-c\fR
+disable site pattern compression
+.TP
+\fB\-q\fR
+Specify the file name which contains the assignment of models to alignment
+partitions for multiple models of substitution. For the syntax of this file
+please consult the manual.
+.TP
+\fB\-h\fR
+Display this help message.
+.SH AUTHOR
+This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/examl.git