[med-svn] [qiime] 10/12: Start fixing dependency relations to work on #820308

Andreas Tille tille at debian.org
Fri Nov 17 12:40:44 UTC 2017


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tille pushed a commit to branch master
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commit 2cf1a82e651eabbe9616a5d609f2dffa0220963f
Author: Andreas Tille <tille at debian.org>
Date:   Fri Nov 17 13:29:24 2017 +0100

    Start fixing dependency relations to work on #820308
---
 debian/changelog |  4 ++++
 debian/control   | 11 ++++++++---
 2 files changed, 12 insertions(+), 3 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 1a4bab9..c5ad181 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -18,6 +18,10 @@ qiime (1.9.1+dfsg-2) UNRELEASED; urgency=medium
   * Fix lintian-override about false positives
   * d/rules: do not parse d/changelog
   * hardening=+all
+  * Fixing dependency relations (related to #820308):
+     - qiime-default-reference: Depends -> Suggests
+     - Build-Depends: bwa, infernal, raxml, sortmerna, swarm
+     - TODO: python-burrito-fillings, emperor
 
  -- Steffen Moeller <moeller at debian.org>  Fri, 05 Feb 2016 22:56:51 +0100
 
diff --git a/debian/control b/debian/control
index f407398..ef6588d 100644
--- a/debian/control
+++ b/debian/control
@@ -16,7 +16,12 @@ Build-Depends: debhelper (>= 10),
                python-setuptools,
                ghc,
                python-sphinx,
-               ruby-ronn
+               ruby-ronn,
+               bwa,
+               infernal,
+               raxml,
+               sortmerna,
+               swarm
 Standards-Version: 4.1.1
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/qiime.git
 Vcs-Git: https://anonscm.debian.org/git/debian-med/qiime.git
@@ -39,7 +44,6 @@ Depends: ${shlibs:Depends},
          python-pandas (>= 0.13.1),
          python-qcli,
          qiime-data,
-         qiime-default-reference,
          ampliconnoise,
          blast2 | blast+-legacy,
          bwa,
@@ -67,7 +71,8 @@ Recommends: mothur,
             rtax
 Suggests: t-coffee,
           cytoscape,
-          torque-client
+          torque-client,
+          qiime-default-reference
 Description: Quantitative Insights Into Microbial Ecology
  QIIME (canonically pronounced ‘Chime’) is a pipeline for performing
  microbial community analysis that integrates many third party tools which

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