[med-svn] [r-bioc-summarizedexperiment] 06/12: New upstream version

Andreas Tille tille at debian.org
Mon Oct 2 09:54:52 UTC 2017


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tille pushed a commit to branch master
in repository r-bioc-summarizedexperiment.

commit d918eccbb3e488c4f6b58b3b1e6c5469d65a7b59
Author: Andreas Tille <tille at debian.org>
Date:   Sun May 8 19:12:27 2016 +0000

    New upstream version
---
 debian/changelog                                             | 7 +++++++
 debian/control                                               | 4 ++--
 debian/patches/skip_test_needing_not_packaged_database.patch | 2 +-
 3 files changed, 10 insertions(+), 3 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 3f0ed12..c6fc763 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+r-bioc-summarizedexperiment (1.2.0-1) unstable; urgency=medium
+
+  * New upstream version
+  * Fix versioned Depends
+
+ -- Andreas Tille <tille at debian.org>  Sun, 08 May 2016 19:12:19 +0200
+
 r-bioc-summarizedexperiment (1.0.2-3) unstable; urgency=medium
 
   * Skip test needing unpackaged database (thanks to Gordon Ball
diff --git a/debian/control b/debian/control
index 24da87e..dada44e 100644
--- a/debian/control
+++ b/debian/control
@@ -7,7 +7,7 @@ Build-Depends: debhelper (>= 9),
                cdbs,
                r-base-dev,
                r-bioc-biobase (>= 2.26.0),
-               r-bioc-genomicranges (>= 1.22.1)
+               r-bioc-genomicranges (>= 1.24.0)
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-summarizedexperiment/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-summarizedexperiment/trunk/
@@ -18,7 +18,7 @@ Architecture: all
 Depends: ${R:Depends},
          ${misc:Depends},
          r-bioc-biobase (>= 2.26.0),
-         r-bioc-genomicranges (>= 1.22.1)
+         r-bioc-genomicranges (>= 1.24.0)
 Recommends: r-bioc-annotate
 Description: BioConductor assay container
  The SummarizedExperiment container contains one or more assays, each
diff --git a/debian/patches/skip_test_needing_not_packaged_database.patch b/debian/patches/skip_test_needing_not_packaged_database.patch
index 9e0660c..74c4014 100644
--- a/debian/patches/skip_test_needing_not_packaged_database.patch
+++ b/debian/patches/skip_test_needing_not_packaged_database.patch
@@ -4,7 +4,7 @@ Last-Update: Tue, 03 May 2016 20:27:21 +0200
 
 --- a/inst/unitTests/test_makeSummarizedExperimentFromExpressionSet.R
 +++ b/inst/unitTests/test_makeSummarizedExperimentFromExpressionSet.R
-@@ -172,12 +172,5 @@ test_GenomicRanges_SummarizedExperiment_
+@@ -176,12 +176,5 @@ test_GenomicRanges_SummarizedExperiment_
              makeSummarizedExperimentFromExpressionSet(ExpressionSet(),
                  geneRangeMapper(NULL))))
  

-- 
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