[med-svn] [gmap] branch master updated (97539d2 -> 8d13438)

[Alex Mestiashvili]

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malex-guest pushed a change to branch master
in repository gmap.

      from  97539d2   Update changelog, upload to unstable
       new  b588a61   New upstream version 2017-09-30
       new  409aace   Updated version 2017-09-30 from 'upstream/2017-09-30'
       new  32228d2   Update d/libgmap1.symbols
       new  29605fe   Bump Standards-Version to 4.1.1
       new  8d13438   Update chnagelog, upload to unstable

The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 ChangeLog                            |   32 +
 VERSION                              |    2 +-
 configure                            |   24 +-
 debian/changelog                     |    8 +
 debian/control                       |    2 +-
 debian/libgmap1.symbols              | 1202 +++++++++++++++++-----------------
 src/Makefile.am                      |    4 +-
 src/Makefile.in                      |   30 +-
 src/chimera.c                        |    4 +-
 src/gmap.c                           |   41 +-
 src/gsnap.c                          |    4 +-
 src/pair.c                           |  150 ++++-
 src/pair.h                           |    7 +-
 src/stage3.c                         |   44 +-
 src/translation.c                    |   54 +-
 src/{uinttable.c => uinttableuint.c} |   75 +--
 src/uinttableuint.h                  |   33 +
 src/uniqscan.c                       |    4 +-
 18 files changed, 988 insertions(+), 732 deletions(-)
 copy src/{uinttable.c => uinttableuint.c} (77%)
 create mode 100644 src/uinttableuint.h

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