[med-svn] [r-bioc-go.db] 01/08: Inject packaging for last database needed to test annotationdbi

Andreas Tille tille at debian.org
Mon Oct 2 12:14:54 UTC 2017


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository r-bioc-go.db.

commit 8a77d0661589d179bf24fd48322dffa4e5f12533
Author: Andreas Tille <tille at debian.org>
Date:   Sun Jan 19 13:49:19 2014 +0000

    Inject packaging for last database needed to test annotationdbi
---
 debian/README.test   |   5 ++
 debian/changelog     |   5 ++
 debian/compat        |   1 +
 debian/control       |  22 +++++++++
 debian/copyright     | 134 +++++++++++++++++++++++++++++++++++++++++++++++++++
 debian/rules         |   4 ++
 debian/source/format |   1 +
 debian/watch         |   3 ++
 8 files changed, 175 insertions(+)

diff --git a/debian/README.test b/debian/README.test
new file mode 100644
index 0000000..149dd05
--- /dev/null
+++ b/debian/README.test
@@ -0,0 +1,5 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+This package can be tested by loading it into R with the command
+‘library(GO.db)’ in order to confirm its integrity.
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..0f1b7d9
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+r-bioc-go.db (2.10.1-1) UNRELEASED; urgency=low
+
+  * Initial release (closes: #???)
+
+ -- Andreas Tille <tille at debian.org>  Thu, 16 Jan 2014 14:13:14 +0100
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..ec63514
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+9
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..ecfa25f
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,22 @@
+Source: r-bioc-go.db
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: gnu-r
+Priority: optional
+Build-Depends: debhelper (>= 9),
+               cdbs,
+               r-base-dev,
+               r-bioc-annotationdbi
+Standards-Version: 3.9.5
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-go.db/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-go.db/trunk/
+Homepage: http://bioconductor.org/packages/release/data/annotation/html/GO.db.html
+
+Package: r-bioc-go.db
+Architecture: all
+Depends: ${R:Depends},
+         ${misc:Depends},
+         r-bioc-annotationdbi
+Description: annotation maps describing the entire Gene Ontology
+ This package is part of BioConductor and provides a set of annotation
+ maps describing the entire Gene Ontology assembled using data from GO.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..3c5783f
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,134 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: GO.db
+Upstream-Contact: Bioconductor Package Maintainer <maintainer at bioconductor.org> 
+Source: http://bioconductor.org/packages/release/data/annotation/html/GO.db.html
+
+Files: *
+Copyright: © 2006-2013 Marc Carlson 
+License: Artistic-2.0
+
+Files: debian/*
+Copyright: 2014 Andreas Tille <tille at debian.org>
+License: Artistic-2.0
+
+License: Artistic-2.0
+ Permission for Use and Modification Without Distribution
+ .
+ (1) You are permitted to use the Standard Version and create and use
+     Modified Versions for any purpose without restriction, provided that you
+     do not Distribute the Modified Version.  Permissions for Redistribution
+     of the Standard Version
+ .
+ (2) You may Distribute verbatim copies of the Source form of the
+     Standard Version of this Package in any medium without restriction,
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+     of the original copyright notices and associated disclaimers. At your
+     discretion, such verbatim copies may or may not include a Compiled form
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+ (3) You may apply any bug fixes, portability changes, and other
+     modifications made available from the Copyright Holder. The resulting
+     Package will still be considered the Standard Version, and as such will
+     be subject to the Original License.  Distribution of Modified Versions
+     of the Package as Source
+ .
+ (4) You may Distribute your Modified Version as Source (either gratis
+     or for a Distributor Fee, and with or without a Compiled form of the
+     Modified Version) provided that you clearly document how it differs from
+     the Standard Version, including, but not limited to, documenting any
+     non-standard features, executables, or modules, and provided that you do
+     at least ONE of the following:
+ .
+     (a) make the Modified Version available to the Copyright Holder of
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+     (b) ensure that installation of your Modified Version does not
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+     Modified Version) with other packages and Distribute the resulting
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+ .
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+     merely extend or make use of the Package, do not, by themselves, cause
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+ .
+ (10) Any use, modification, and distribution of the Standard or
+      Modified Versions is governed by this Artistic License. By using,
+      modifying or distributing the Package, you accept this license. Do not
+      use, modify, or distribute the Package, if you do not accept this
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+ (11) If your Modified Version has been derived from a Modified Version
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diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..aeb12b3
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,4 @@
+#!/usr/bin/make -f
+
+debRreposname=bioc
+include /usr/share/R/debian/r-cran.mk
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..67f0daa
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,3 @@
+version=3
+opts=downloadurlmangle=s/\.\./packages\/release\/data\/annotation/ \
+ http://www.bioconductor.org/packages/release/data/annotation/html/GO.db.html .*/GO\.db_([\d\.]+)\.tar\.gz

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