[med-svn] [seqan2] branch upstream updated (b70ac79 -> 5f34962)

Michael Crusoe misterc-guest at moszumanska.debian.org
Fri Oct 13 12:05:23 UTC 2017


This is an automated email from the git hooks/post-receive script.

misterc-guest pushed a change to branch upstream
in repository seqan2.

      from  b70ac79   New upstream version 2.3.2+dfsg
      adds  5f34962   New upstream version 2.3.2+dfsg2

No new revisions were added by this update.

Summary of changes:
 util/py_lib/CMakeLists.txt                         |  34 ++
 {demos => util/py_lib/seqan}/LICENSE               |   0
 .../ngs_roi => util/py_lib/seqan}/__init__.py      |   0
 util/py_lib/seqan/app_tests.py                     | 458 ++++++++++++++++++
 util/py_lib/seqan/auto_build.py                    | 532 +++++++++++++++++++++
 util/py_lib/seqan/fixgcov/README                   |  22 +
 util/py_lib/seqan/fixgcov/__init__.py              |  10 +
 util/py_lib/seqan/fixgcov/app.py                   | 291 +++++++++++
 util/py_lib/seqan/paths.py                         |  65 +++
 util/py_lib/seqan/pyclangcheck/__init__.py         |  10 +
 util/py_lib/seqan/pyclangcheck/app.py              | 322 +++++++++++++
 util/py_lib/seqan/pyclangcheck/rules.py            | 201 ++++++++
 util/py_lib/seqan/pyclangcheck/simple_checks.py    | 117 +++++
 util/py_lib/seqan/pyclangcheck/suppressions.py     |   1 +
 util/py_lib/seqan/pyclangcheck/violations.py       |  91 ++++
 util/py_lib/seqan/seqan.css                        |   7 +
 util/py_lib/seqan/seqan.html                       | 148 ++++++
 util/py_lib/seqan/skel.py                          | 467 ++++++++++++++++++
 18 files changed, 2776 insertions(+)
 create mode 100644 util/py_lib/CMakeLists.txt
 copy {demos => util/py_lib/seqan}/LICENSE (100%)
 copy {apps/ngs_roi/tool_shed/ngs_roi => util/py_lib/seqan}/__init__.py (100%)
 create mode 100644 util/py_lib/seqan/app_tests.py
 create mode 100755 util/py_lib/seqan/auto_build.py
 create mode 100644 util/py_lib/seqan/fixgcov/README
 create mode 100755 util/py_lib/seqan/fixgcov/__init__.py
 create mode 100755 util/py_lib/seqan/fixgcov/app.py
 create mode 100755 util/py_lib/seqan/paths.py
 create mode 100755 util/py_lib/seqan/pyclangcheck/__init__.py
 create mode 100755 util/py_lib/seqan/pyclangcheck/app.py
 create mode 100755 util/py_lib/seqan/pyclangcheck/rules.py
 create mode 100755 util/py_lib/seqan/pyclangcheck/simple_checks.py
 create mode 100755 util/py_lib/seqan/pyclangcheck/suppressions.py
 create mode 100755 util/py_lib/seqan/pyclangcheck/violations.py
 create mode 100644 util/py_lib/seqan/seqan.css
 create mode 100644 util/py_lib/seqan/seqan.html
 create mode 100755 util/py_lib/seqan/skel.py

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