[med-svn] [nanopolish] 07/09: Drop useless patch

Afif Elghraoui afif at moszumanska.debian.org
Sun Feb 4 21:19:30 UTC 2018


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afif pushed a commit to branch master
in repository nanopolish.

commit 14d3d4882de82b558ceb4044ab417d9f1aed0d19
Author: Afif Elghraoui <afif at debian.org>
Date:   Sun Feb 4 16:11:04 2018 -0500

    Drop useless patch
---
 debian/patches/series                            |  1 -
 debian/patches/write_return_values_ignored.patch | 24 ------------------------
 2 files changed, 25 deletions(-)

diff --git a/debian/patches/series b/debian/patches/series
index d2144c0..bfc5783 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1,3 +1,2 @@
 add-shebang-to-script.patch
 reproducible.patch
-write_return_values_ignored.patch
diff --git a/debian/patches/write_return_values_ignored.patch b/debian/patches/write_return_values_ignored.patch
deleted file mode 100644
index c933766..0000000
--- a/debian/patches/write_return_values_ignored.patch
+++ /dev/null
@@ -1,24 +0,0 @@
-Author: Steffen Moeller
-Last-Updated: 2017-09-16 02:14:07 +0200
-Description: Do not ignore return values of samtool functions
-
---- nanopolish.orig/src/alignment/nanopolish_eventalign.cpp
-+++ nanopolish/src/alignment/nanopolish_eventalign.cpp
-@@ -229,7 +229,7 @@
- 
- void emit_sam_header(samFile* fp, const bam_hdr_t* hdr)
- {
--    sam_hdr_write(fp, hdr);
-+    int r = sam_hdr_write(fp, hdr);
- }
- 
- std::string cigar_ops_to_string(const std::vector<uint32_t>& ops)
-@@ -368,7 +368,7 @@
-     int stride = alignments.front().event_idx < alignments.back().event_idx ? 1 : -1;
-     bam_aux_append(event_record, "ES", 'i', 4, reinterpret_cast<uint8_t*>(&stride));
- 
--    sam_write1(fp, base_hdr, event_record);
-+    int r = sam_write1(fp, base_hdr, event_record);
-     bam_destroy1(event_record); // automatically frees malloc'd segment
- }
- 

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