[med-svn] [bedtools] 05/05: Remove patch which now rather leads to failure of test

Andreas Tille tille at debian.org
Sat Feb 10 08:58:03 UTC 2018


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tille pushed a commit to branch master
in repository bedtools.

commit cbb3284d672b4adf177621195dec7681e4c5a792
Author: Andreas Tille <tille at debian.org>
Date:   Sat Feb 10 09:57:25 2018 +0100

    Remove patch which now rather leads to failure of test
---
 debian/patches/v2.26.0-19-g6bf23c4.patch | 11 -----------
 1 file changed, 11 deletions(-)

diff --git a/debian/patches/v2.26.0-19-g6bf23c4.patch b/debian/patches/v2.26.0-19-g6bf23c4.patch
index e24c108..661dc4f 100644
--- a/debian/patches/v2.26.0-19-g6bf23c4.patch
+++ b/debian/patches/v2.26.0-19-g6bf23c4.patch
@@ -15,17 +15,6 @@ Description: Sync with upstream repo at commit 6bf23c
    _allFilesOpened(false),
    _genomeFile(NULL),
    _outputFileType(FileRecordTypeChecker::UNKNOWN_FILE_TYPE),
---- a/test/coverage/test-coverage.sh
-+++ b/test/coverage/test-coverage.sh
-@@ -508,7 +508,7 @@ rm exp obs
- ##################################################################
- echo -e "    coverage.t10...\c"
- echo \
--"chr1	0	50	3	30	50	0.6000000
-+"chr1	0	50	1	30	50	0.6000000
- chr1	12	20	0	0	8	0.0000000" > exp
- $BT coverage -a c.bed -b three_blocks_match.bam -split > obs
- check exp obs
 --- a/test/general/test-general.sh
 +++ b/test/general/test-general.sh
 @@ -333,6 +333,17 @@ $BT intersect -a a.trackheader.bed -b a.

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