[med-svn] [Git][med-team/macs][master] Rather use unchanged (==gzipped) example data and precisely describe how these were obtained

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / macs


Commits:
770bb8d5 by Andreas Tille at 2018-02-19T09:46:35+01:00
Rather use unchanged (==gzipped) example data and precisely describe how these were obtained

- - - - -


6 changed files:

- debian/README.test
- − debian/examples/aluY.chr1.bed
- + debian/examples/aluY.chr1.bed.gz
- − debian/examples/gerp.chr1.bed
- + debian/examples/gerp.chr1.bed.gz
- + debian/source/include-binaries


Changes:

=====================================
debian/README.test
=====================================
--- a/debian/README.test
+++ b/debian/README.test
@@ -7,6 +7,12 @@ This package can be tested by executing
 
 in order to confirm its integrity.
 
-Note: The sample data are recovered from https://github.com/arq5x/  They are both ‘.BED’ 
-file extensions. However the macs package install instructions is
-using the ‘BAM’ extension format. If anyone has any recommendation on where to find sample data in this format it will be much appreciated :)
+Note: The sample data are obtained via
+
+    wget -q https://github.com/arq5x/bedtools2/blob/master/data/aluY.chr1.bed.gz?raw=true -O debian/examples/aluY.chr1.bed.gz
+    wget -q https://github.com/arq5x/bedtools2/blob/master/data/gerp.chr1.bed.gz?raw=true -O debian/examples/gerp.chr1.bed.gz
+
+They are both ‘.BED’ file extensions. However the macs package install
+instructions is using the ‘BAM’ extension format. If anyone has any
+recommendation on where to find sample data in this format it will be
+much appreciated :)


=====================================
debian/examples/aluY.chr1.bed deleted
=====================================
The diff for this file was not included because it is too large.

=====================================
debian/examples/aluY.chr1.bed.gz
=====================================
Binary files /dev/null and b/debian/examples/aluY.chr1.bed.gz differ


=====================================
debian/examples/gerp.chr1.bed deleted
=====================================
The diff for this file was not included because it is too large.

=====================================
debian/examples/gerp.chr1.bed.gz
=====================================
Binary files /dev/null and b/debian/examples/gerp.chr1.bed.gz differ


=====================================
debian/source/include-binaries
=====================================
--- /dev/null
+++ b/debian/source/include-binaries
@@ -0,0 +1,2 @@
+debian/examples/aluY.chr1.bed.gz
+debian/examples/gerp.chr1.bed.gz



View it on GitLab: https://salsa.debian.org/med-team/macs/commit/770bb8d52b583cf8e85ad0b37c853624d5a3dbc9

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View it on GitLab: https://salsa.debian.org/med-team/macs/commit/770bb8d52b583cf8e85ad0b37c853624d5a3dbc9
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