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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/jellyfish">Debian Med / jellyfish</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/jellyfish/commit/d2ced9a4ebd39a9a21073b29a2642a6b3d1d1d9f">d2ced9a4</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2018-02-11T04:40:47-08:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.2.8</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/jellyfish/commit/bd0b9735222d109b459c994709e9534cd5525927">bd0b9735</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2018-02-11T04:40:49-08:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.2.8'
Update to upstream version '2.2.8'
with Debian dir 7394e13779989895c917beecd9eaf77da6e91226</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/jellyfish/commit/c2cdb414c927d03d225db69bacd80490554c75fb">c2cdb414</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2018-02-11T09:22:01-08:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">2.2.8
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#d5b4de16d947214ec306bd57bed1bd23a939b5f9">
Makefile.am
</a>
</li>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#76ce9724ed97a005df2dfe559d65dc1c62f53c3f">
debian/patches/drop-rpath
</a>
</li>
<li class="file-stats">
<a href="#5212ceeafac888ac00e8c86301c60d08d543e807">
debian/patches/portability.patch
</a>
</li>
<li class="file-stats">
<a href="#1a21a87540686d1e720eceb04a1871a45a21a9d8">
<span class="deleted-file">
−
debian/patches/rename-python-module-to-dna_jellyfish.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#6b978c8ad7242d2a071fec666526fb8b68a0aab1">
<span class="new-file">
+
debian/patches/skip_small_mers.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#c47cb55a486390c92107f7c3d887c77f89a1a2d1">
include/jellyfish/file_header.hpp
</a>
</li>
<li class="file-stats">
<a href="#4fa648804944846092ebcf00c8d6c3c42fc7646b">
include/jellyfish/hash_counter.hpp
</a>
</li>
<li class="file-stats">
<a href="#aac90e83acd88c2af62dcbb1335c0bf27cc49e84">
include/jellyfish/large_hash_array.hpp
</a>
</li>
<li class="file-stats">
<a href="#135d1e90aaf79bb659e3379d433377cf84c16ebc">
include/jellyfish/mer_overlap_sequence_parser.hpp
</a>
</li>
<li class="file-stats">
<a href="#b25757f1a3c22d0ef5fa71e4e023bad9faf862a8">
include/jellyfish/rectangular_binary_matrix.hpp
</a>
</li>
<li class="file-stats">
<a href="#795c965c56fb99b15f10b51c23f0d449b4be4e62">
include/jellyfish/whole_sequence_parser.hpp
</a>
</li>
<li class="file-stats">
<a href="#e1cca8eff1a522cb9ebd4ed0b0fa4daf34c37b96">
jellyfish/dbg.cc
</a>
</li>
<li class="file-stats">
<a href="#d32b2de82156a66c6e9f380ec0200b0495c542cc">
lib/rectangular_binary_matrix.cc
</a>
</li>
<li class="file-stats">
<a href="#fee8f992b0843543fca08e6e2b5b800b8c73587c">
swig/Makefile.am
</a>
</li>
<li class="file-stats">
<a href="#bdd2f5f6628731ebb98dadc58db5e097628a1a9a">
swig/jellyfish.i
</a>
</li>
<li class="file-stats">
<a href="#174994591b090339851ef194eff319ac4a3b130c">
swig/python/setup.py
</a>
</li>
<li class="file-stats">
<a href="#b1ad24d585c62660bbbbe9323de3b50822d7794c">
swig/python/test_hash_counter.py
</a>
</li>
<li class="file-stats">
<a href="#cdb525ffd515630eb74f7c0408f6b814cba7770c">
swig/python/test_mer_file.py
</a>
</li>
<li class="file-stats">
<a href="#c4e43ffaee7a6374873dd091bbb7b3b1de510bfa">
swig/python/test_string_mers.py
</a>
</li>
<li class="file-stats">
<a href="#8fe204e4479e4aa782166154be41fd8d110596d0">
swig/ruby/test_hash_counter.rb
</a>
</li>
<li class="file-stats">
<a href="#f3143fdae2070c38a4a0b1e9b2cf62818aec81a6">
swig/ruby/test_mer_file.rb
</a>
</li>
<li class="file-stats">
<a href="#410c2e04f0f6b8991737fe0aebe0387785c4915b">
swig/ruby/test_string_mers.rb
</a>
</li>
<li class="file-stats">
<a href="#dbc44b7e55a2935c1034285f3416f66d15dad625">
swig/string_mers.i
</a>
</li>
<li class="file-stats">
<a href="#c878463f754b5abc179799edd2d6905ef2457378">
tests/compat.sh.in
</a>
</li>
<li class="file-stats">
<a href="#0de1c629a45e15e8fc1bb2546cf1c343dd03ade3">
unit_tests/test_file_header.cc
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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