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<h3>
Michael R. Crusoe pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/trinityrnaseq">Debian Med / trinityrnaseq</a>
</h3>
<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/trinityrnaseq/commit/20fbb21125d693fcf75d0f123f4375d7bc2a8559">20fbb211</a></strong>
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<span>by Michael R. Crusoe</span>
<i>at 2018-02-11T04:55:06-08:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.5.1+dfsg</pre>
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<h4>21 changed files:</h4>
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.gitmodules
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Analysis/DifferentialExpression/DTE_to_DTU.pl
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Analysis/DifferentialExpression/GOplot.Rscript
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Analysis/DifferentialExpression/Glimma.Trinity.Rscript
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Analysis/DifferentialExpression/PtR
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<a href="#7f1ef9534bdb85023179cd39cfd1a26daa95e4f2">
Analysis/DifferentialExpression/R/misc_rnaseq_funcs.R
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Analysis/DifferentialExpression/R/rnaseq_plot_funcs.R
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Analysis/DifferentialExpression/R/vioplot2.R
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Analysis/DifferentialExpression/analyze_diff_expr.pl
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Analysis/DifferentialExpression/plot_all_DE_MAplots.Rscript
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Analysis/DifferentialExpression/plot_all_DE_volcanos.Rscript
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Analysis/DifferentialExpression/prep_n_run_GOplot.pl
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Analysis/DifferentialExpression/prune_isoforms_fasta.pl
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Analysis/DifferentialExpression/prune_isoforms_gtf.pl
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Analysis/DifferentialExpression/run_DE_analysis.pl
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Analysis/DifferentialExpression/run_GOseq.pl
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Analysis/DifferentialExpression/validate_UP_subset.Rscript
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Analysis/FL_reconstruction_analysis/FL_trans_analysis_pipeline.pl
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Analysis/FL_reconstruction_analysis/util/blat_full_length_mappings.pl
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Analysis/FL_reconstruction_analysis/util/blat_psl_to_align_summary_stats.pl
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Analysis/FL_reconstruction_analysis/util/blat_query_top_hit_extractor.pl
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