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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/htslib">Debian Med / htslib</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/htslib/commit/ede72ab70551f396c3ae143be79d83a652ed7e17">ede72ab7</a></strong>
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<span>by Andreas Tille</span>
<i>at 2018-02-14T09:48:49+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Document how to test the package
</pre>
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<h4>4 changed files:</h4>
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<a href="#f6a99a1e522a0f5ca122fd9818a9d8536ea59942">
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+
debian/README.test
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debian/changelog
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debian/htslib-test.install
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debian/libhts-dev.docs
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<h4>Changes:</h4>
<li id="f6a99a1e522a0f5ca122fd9818a9d8536ea59942">
<a href="https://salsa.debian.org/med-team/htslib/commit/ede72ab70551f396c3ae143be79d83a652ed7e17#f6a99a1e522a0f5ca122fd9818a9d8536ea59942"><strong>debian/README.test</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="php"><span class="nx">Notes</span> <span class="nx">on</span> <span class="nx">how</span> <span class="k" style="font-weight: 600;">this</span> <span class="nx">package</span> <span class="nx">can</span> <span class="nx">be</span> <span class="nx">tested</span><span class="o" style="font-weight: 600;">.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="php"><span class="err" style="color: #a61717; background-color: #e3d2d2;">────────────────────────────────────────</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="php"></span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="php"><span class="nx">To</span> <span class="nx">run</span> <span class="nx">the</span> <span class="nx">unit</span> <span class="nx">tests</span> <span class="nx">provided</span> <span class="nx">by</span> <span class="nx">the</span> <span class="nx">upstream</span> <span class="nx">authors</span> <span class="nx">of</span> <span class="k" style="font-weight: 600;">this</span> <span class="nx">package</span></span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="php"><span class="nx">you</span> <span class="nx">can</span> <span class="nx">install</span> <span class="nx">the</span> <span class="nx">package</span> <span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span> <span class="k" style="font-weight: 600;">and</span> <span class="nx">run</span></span>
</pre>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="php"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="php"> <span class="nx">sh</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">doc</span><span class="o" style="font-weight: 600;">/</span><span class="nx">libhts</span><span class="o" style="font-weight: 600;">-</span><span class="nx">dev</span><span class="o" style="font-weight: 600;">/</span><span class="nx">run</span><span class="o" style="font-weight: 600;">-</span><span class="nx">unit</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="php"> <span class="o" style="font-weight: 600;">--</span> <span class="nx">Andreas</span> <span class="nx">Tille</span> <span class="o" style="font-weight: 600;"><</span><span class="nx">tille</span><span class="o" style="font-weight: 600;">@</span><span class="nx">debian</span><span class="o" style="font-weight: 600;">.</span><span class="nx">org</span><span class="o" style="font-weight: 600;">></span> <span class="nx">Wed</span><span class="p">,</span> <span class="mi" style="color: #099;">14</span> <span class="nx">Feb</span> <span class="mi" style="color: #099;">2018</span> <span class="mi" style="color: #099;">09</span><span class="o" style="font-weight: 600;">:</span><span class="mi" style="color: #099;">43</span><span class="o" style="font-weight: 600;">:</span><span class="mi" style="color: #099;">36</span> <span class="o" style="font-weight: 600;">+</span><span class="mo" style="color: #099;">0100</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="php"></span></pre>
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<a href="https://salsa.debian.org/med-team/htslib/commit/ede72ab70551f396c3ae143be79d83a652ed7e17#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">htslib</span> <span class="p">(</span><span class="m" style="color: #099;">1.7</span><span class="p">-</span><span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="n" style="color: #333;">UNRELEASED</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="mosel"></span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Move</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">needed</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">into</span> <span class="n" style="color: #333;">htslib</span><span class="p">-</span><span class="n" style="color: #333;">test</span> <span class="k" style="font-weight: 600;">package</span></span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="mosel"> <span class="n" style="color: #333;">Closes</span><span class="p">:</span> <span class="p">#</span><span class="m" style="color: #099;">890303</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Document</span> <span class="n" style="color: #333;">how</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">test</span> <span class="n" style="color: #333;">the</span> <span class="k" style="font-weight: 600;">package</span></span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="mosel"> <span class="p">--</span> <span class="n" style="color: #333;">Andreas</span> <span class="n" style="color: #333;">Tille</span> <span class="p"><</span><span class="n" style="color: #333;">tille</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span> <span class="n" style="color: #333;">Wed</span><span class="p">,</span> <span class="m" style="color: #099;">14</span> <span class="n" style="color: #333;">Feb</span> <span class="m" style="color: #099;">2018</span> <span class="m" style="color: #099;">09</span><span class="p">:</span><span class="m" style="color: #099;">43</span><span class="p">:</span><span class="m" style="color: #099;">36</span> <span class="p">+</span><span class="m" style="color: #099;">0100</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"><span class="n" style="color: #333;">htslib</span> <span class="p">(</span><span class="m" style="color: #099;">1.7</span><span class="p">-</span><span class="m" style="color: #099;">1</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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2
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Team</span> <span class="n" style="color: #333;">upload</span><span class="p">.</span></span>
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<a href="https://salsa.debian.org/med-team/htslib/commit/ede72ab70551f396c3ae143be79d83a652ed7e17#e72ba9a3ec84f8e3c02f0f183c13ec9b8a72c25c"><strong>debian/htslib-test.install</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="php"><span class="o" style="font-weight: 600;">*.</span><span class="nx">c</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="php"><span class="o" style="font-weight: 600;">*.</span><span class="nx">h</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="php"><span class="o" style="font-weight: 600;">*.</span><span class="nx">mk</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="php"><span class="nx">Makefile</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="php"><span class="nx">cram</span><span class="o" style="font-weight: 600;">/*.</span><span class="nx">c</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span><span class="o" style="font-weight: 600;">/</span><span class="nx">cram</span></span>
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6
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="php"><span class="nx">cram</span><span class="o" style="font-weight: 600;">/*.</span><span class="nx">h</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span><span class="o" style="font-weight: 600;">/</span><span class="nx">cram</span></span>
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7
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="php"><span class="nx">test</span><span class="o" style="font-weight: 600;">/*</span> <span class="o" style="font-weight: 600;">/</span><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span><span class="o" style="font-weight: 600;">/</span><span class="nx">test</span></span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="php"><span class="o" style="font-weight: 600;">*.</span><span class="nx">c</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="php"><span class="o" style="font-weight: 600;">*.</span><span class="nx">h</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="php"><span class="o" style="font-weight: 600;">*.</span><span class="nx">mk</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="php"><span class="nx">Makefile</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="php"><span class="nx">cram</span><span class="o" style="font-weight: 600;">/*.</span><span class="nx">c</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span><span class="o" style="font-weight: 600;">/</span><span class="nx">cram</span></span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="php"><span class="nx">cram</span><span class="o" style="font-weight: 600;">/*.</span><span class="nx">h</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span><span class="o" style="font-weight: 600;">/</span><span class="nx">cram</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="php"><span class="nx">test</span><span class="o" style="font-weight: 600;">/*</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span><span class="o" style="font-weight: 600;">/</span><span class="nx">test</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="php"><span class="nx">os</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="php"><span class="nx">version</span><span class="o" style="font-weight: 600;">.</span><span class="nx">sh</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">htslib</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="php"><span class="nx">debian</span><span class="o" style="font-weight: 600;">/</span><span class="nx">tests</span><span class="o" style="font-weight: 600;">/</span><span class="nx">run</span><span class="o" style="font-weight: 600;">-</span><span class="nx">unit</span><span class="o" style="font-weight: 600;">-</span><span class="nx">test</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">doc</span><span class="o" style="font-weight: 600;">/</span><span class="nx">libhts</span><span class="o" style="font-weight: 600;">-</span><span class="nx">dev</span></span></pre>
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<a href="https://salsa.debian.org/med-team/htslib/commit/ede72ab70551f396c3ae143be79d83a652ed7e17#aced1773aa22d260aa9f9f8694ed1e2157d36720"><strong>debian/libhts-dev.docs</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">debian/README.test</span></pre>
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