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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/transdecoder">Debian Med / transdecoder</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/cdfe4fb07d16d46bc32d2a493372e9d118b695ee">cdfe4fb0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T11:48:57+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version (no need to repackage since binary files are now removed upstream)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/1cc2e64b47f087c83bfc4f84cf2705b5894021da">1cc2e64b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T11:49:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.0.1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/f1997c25d8c78b187f03b909532a3def5f0314df">f1997c25</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T11:50:04+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/5.0.1'
Update to upstream version '5.0.1'
with Debian dir d18ad1539cced7cbbda07eda2fff4f316639dc8c</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/857f9342d30ff3820af8c7c05de9aa2564c0cbd0">857f9342</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T14:20:58+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upstream changelog: cdhit has been removed and replaced by our own fast method for removing redundancies
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/27d6ed9bab6d84e0e1de03a792a2f40a9808c165">27d6ed9b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T14:21:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.1.3
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/f73d1659a70a03224dd1fbd67a6ffc939d41ecc2">f73d1659</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T14:22:02+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/b8e0b970a7c5f5bbfb489c0ec82b5fd83f6bbf44">b8e0b970</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T15:07:04+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add missing Depends: r-base-core, python
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/ef34025cd93b6cd9efb5ceb0769f69c402e05e7b">ef34025c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T15:08:48+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">do not parse d/changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/02c03e8d9bc715a0fd0cf7022595f1dee45f4ea2">02c03e8d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T15:10:34+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix permissions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/694c2d8f556deebf340f179cc9179b757572be24">694c2d8f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T15:10:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">parallel is now default
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/ff74284551165471bfa6c0fa8b1b979d5131302c">ff742845</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-03-16T17:50:30+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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.gitmodules
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<a href="#36238d5fa26683466193f61b8d724919bec12681">
Changelog.txt
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<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
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PerlLib/DelimParser.pm
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PerlLib/PWM.pm
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PerlLib/overlapping_nucs.ph
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<a href="#69e27356ef629022720d868ab0c0e3394775b6c1">
README
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<a href="#47c4aea6d1b5c84a5c6394791a819e67ed5d55f0">
TransDecoder.LongOrfs
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<a href="#150dac2893fb8d3bf9adf13719f9e45d226cdd4d">
TransDecoder.Predict
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debian/changelog
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debian/compat
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debian/patches/fix-whatis
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debian/patches/series
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debian/rules
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debian/watch
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sample_data/Makefile
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sample_data/cufflinks_example/cleanme.pl
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sample_data/cufflinks_example/runMe.sh
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sample_data/pasa_example/cleanme.pl
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sample_data/simple_transcriptome_target/runMe.sh
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<h5>The diff was not included because it is too large.</h5>
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