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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/libbio-mage-utils-perl">Debian Med / libbio-mage-utils-perl</a>
</h3>
<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/libbio-mage-utils-perl/commit/eda24d2ffe40b0c0bb4f2f7cc3f3742369fccda1">eda24d2f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-03-16T21:25:51+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Commit missing file
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<h4>1 changed file:</h4>
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<a href="#45ae034d1d71b2d961abb7c91cf3d2f1a02a59c6">
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+
debian/patches/spelling.patch
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<h4>Changes:</h4>
<li id="45ae034d1d71b2d961abb7c91cf3d2f1a02a59c6">
<a href="https://salsa.debian.org/med-team/libbio-mage-utils-perl/commit/eda24d2ffe40b0c0bb4f2f7cc3f3742369fccda1#45ae034d1d71b2d961abb7c91cf3d2f1a02a59c6"><strong>debian/patches/spelling.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff">Author: Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff">Last-Update: Tue, 21 Nov 2017 15:29:17 +0100</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff">Desription: Fix spelling</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/MAGE/XML/Handler.pm b/MAGE/XML/Handler.pm</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="gh" style="color: #999;">index 97b2c6c..e5cfcfe 100644</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/MAGE/XML/Handler.pm</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/MAGE/XML/Handler.pm</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -82,7 +82,7 @@ sub unhandled {</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> ###############################################################################</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-# count: setter/getter for the scalar to track counting ouput</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# count: setter/getter for the scalar to track counting output</span></span>
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> ###############################################################################</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> sub count {</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> my $self = shift;</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/MAGE/XML/Reader.pm b/MAGE/XML/Reader.pm</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gh" style="color: #999;">index 8e075fd..15986ec 100644</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/MAGE/XML/Reader.pm</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/MAGE/XML/Reader.pm</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -124,7 +124,7 @@ sub sax1 {</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"> ###############################################################################</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-# count: setter/getter for the scalar to track counting ouput</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# count: setter/getter for the scalar to track counting output</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> ###############################################################################</span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"> sub count {</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> my $self = shift;</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -151,7 +151,7 @@ output</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"> =item * log_file</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-called with the file handle to which ouput should be sent</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+called with the file handle to which output should be sent</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"> =item * init</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/MAGE/XML/Writer.pm b/MAGE/XML/Writer.pm</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="gh" style="color: #999;">index e643bfd..ae31722 100644</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/MAGE/XML/Writer.pm</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/MAGE/XML/Writer.pm</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -920,7 +920,7 @@ sub data_format {</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"> The C<fh> attribute only controls where the main MAGE-ML document is</span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"> written. If the C<external_data> attribute is set, the writer will</span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-also create a seperate external data file for each data cube.</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+also create a separate external data file for each data cube.</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"> The C<external_data_dir> controls what director those files are</span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"> written to.</span></pre>
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