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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/transdecoder">Debian Med / transdecoder</a>
</h3>
<h4>
Commits:
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<li>
<strong><a href="https://salsa.debian.org/med-team/transdecoder/commit/1cc2e64b47f087c83bfc4f84cf2705b5894021da">1cc2e64b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-02-19T11:49:37+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.0.1</pre>
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<h4>30 changed files:</h4>
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.gitmodules
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<a href="#36238d5fa26683466193f61b8d724919bec12681">
Changelog.txt
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<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
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PerlLib/DelimParser.pm
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PerlLib/PWM.pm
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PerlLib/Pipeliner.pm
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PerlLib/Process_cmd.pm
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PerlLib/overlapping_nucs.ph
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README
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<a href="#47c4aea6d1b5c84a5c6394791a819e67ed5d55f0">
TransDecoder.LongOrfs
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TransDecoder.Predict
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sample_data/Makefile
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sample_data/cufflinks_example/cleanme.pl
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sample_data/cufflinks_example/runMe.sh
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sample_data/pasa_example/cleanme.pl
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sample_data/simple_transcriptome_target/Makefile
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sample_data/simple_transcriptome_target/cleanme.pl
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sample_data/simple_transcriptome_target/genome_alignments.gmap.gff3.gz
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sample_data/simple_transcriptome_target/runMe.sh
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sample_data/stringtie_example/Makefile
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sample_data/stringtie_example/cleanme.pl
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sample_data/stringtie_example/stringtie_merged.gtf
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sample_data/stringtie_example/stringtie_merged.transcripts.fasta
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util/PWM/README.md
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util/PWM/__deprecated/build_atgPWM.pl
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util/PWM/__deprecated/build_pwm.pl
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util/PWM/__deprecated/optimize_atgPWM.pl
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util/PWM/__deprecated/optimize_atgPWM_+-.pl
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util/PWM/__deprecated/optimize_atgPWM_+-.predict.pl
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<h5>The diff was not included because it is too large.</h5>

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