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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/hmmer">Debian Med / hmmer</a>
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<h4>
Commits:
</h4>
<ul>
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<strong><a href="https://salsa.debian.org/med-team/hmmer/commit/19e9aa4d89e285014ff5a55b8715ad4b39985163">19e9aa4d</a></strong>
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<span>by Andreas Tille</span>
<i>at 2018-03-16T23:29:01+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Mass commit changes for 3.1b2+dfsg-5 (single commits are somehow lost, also the Debian revision bump from -3 to -5 is a failure but has just happened that way)
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<h4>5 changed files:</h4>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
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<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/hmmer/commit/19e9aa4d89e285014ff5a55b8715ad4b39985163#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">hmmer (3.1b2+dfsg-<span class="idiff left right">4) UNREELASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">hmmer (3.1b2+dfsg-<span class="idiff left right">5) unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> * debian/upstream/metadata: Added references to </span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> bio.tools, OMICtools, RRID</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * New homepage</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Fix watch file</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * debhelper 10</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> -- <span class="idiff left right">Steffen Moeller <moeller@debian.org> Fri, 21 Jul 2017 19:29:02 +02</span>00</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> -- <span class="idiff left right">Andreas Tille <tille@debian.org> Fri, 20 Jan 2017 15:35:12 +01</span>00</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">hmmer (3.1b2+dfsg-3) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"></span>
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<li id="78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<a href="https://salsa.debian.org/med-team/hmmer/commit/19e9aa4d89e285014ff5a55b8715ad4b39985163#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"><span class="idiff left right">9</span></span></pre>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext"><span class="idiff left right">10</span></span></pre>
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<a href="https://salsa.debian.org/med-team/hmmer/commit/19e9aa4d89e285014ff5a55b8715ad4b39985163#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,13 +3,13 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.</td>
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="mosel"><span class="n" style="color: #333;">Uploaders</span><span class="p">:</span> <span class="n" style="color: #333;">Andreas</span> <span class="n" style="color: #333;">Tille</span> <span class="p"><</span><span class="n" style="color: #333;">tille</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>,</span></span>
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4
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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="mosel"><span class="n" style="color: #333;">Section</span><span class="p">:</span> <span class="n" style="color: #333;">science</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="mosel"><span class="n" style="color: #333;">Priority</span><span class="p">:</span> <span class="n" style="color: #333;">optional</span></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="mosel"><span class="n" style="color: #333;">Build</span><span class="p">-</span><span class="n" style="color: #333;">Depends</span><span class="p">:</span> <span class="n" style="color: #333;">debhelper</span> <span class="p">(>=</span> <span class="m" style="color: #099;"><span class="idiff left right">9</span></span><span class="p">),</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="mosel"><span class="n" style="color: #333;">Build</span><span class="p">-</span><span class="n" style="color: #333;">Depends</span><span class="p">:</span> <span class="n" style="color: #333;">debhelper</span> <span class="p">(>=</span> <span class="m" style="color: #099;"><span class="idiff left right">10</span></span><span class="p">),</span></span>
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="mosel"> <span class="n" style="color: #333;">dh</span><span class="p">-</span><span class="n" style="color: #333;">autoreconf</span><span class="p">,</span></span>
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8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="mosel"> <span class="n" style="color: #333;">libdivsufsort</span><span class="p">-</span><span class="n" style="color: #333;">dev</span></span>
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9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"><span class="n" style="color: #333;">Standards</span><span class="p">-</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">3.9.8</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"><span class="n" style="color: #333;">Vcs</span><span class="p">-</span><span class="n" style="color: #333;">Browser</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">anonscm</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">git</span><span class="p">/</span><span class="n" style="color: #333;">debian</span><span class="p">-</span><span class="n" style="color: #333;">med</span><span class="p">/</span><span class="n" style="color: #333;">hmmer</span><span class="p">.</span><span class="n" style="color: #333;">git</span></span>
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="mosel"><span class="n" style="color: #333;">Vcs</span><span class="p">-</span><span class="n" style="color: #333;">Git</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">anonscm</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">git</span><span class="p">/</span><span class="n" style="color: #333;">debian</span><span class="p">-</span><span class="n" style="color: #333;">med</span><span class="p">/</span><span class="n" style="color: #333;">hmmer</span><span class="p">.</span><span class="n" style="color: #333;">git</span></span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">hmmer</span><span class="p">.</span><span class="n" style="color: #333;"><span class="idiff left">janelia</span></span><span class="p"><span class="idiff right">.</span></span><span class="n" style="color: #333;">org</span><span class="p">/</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">hmmer</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span></span>
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13
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="mosel"></span>
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14
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="mosel"><span class="k" style="font-weight: 600;">Package</span><span class="p">:</span> <span class="n" style="color: #333;">hmmer</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="mosel"><span class="n" style="color: #333;">Architecture</span><span class="p">:</span> <span class="n" style="color: #333;">any</span><span class="p">-</span><span class="n" style="color: #333;">amd64</span> <span class="n" style="color: #333;">any</span><span class="p">-</span><span class="n" style="color: #333;">i386</span></span>
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<li id="adb7f75f79e3bb85eb62912a2904c5d24af878fb">
<a href="https://salsa.debian.org/med-team/hmmer/commit/19e9aa4d89e285014ff5a55b8715ad4b39985163#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Format: http<span class="idiff left right">s</span>://www.debian.org/doc/packaging-manuals/copyright-format/1.0/</span>
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Upstream-Name: HMMER</span>
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Upstream-Contact: Sean R. Eddy <eddys@janelia.hhmi.org></span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">Source: <span class="idiff left right">ftp://selab.janelia.org/pub/software/hmmer3/3.0/</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">Source: <span class="idiff left right">http://hmmer.org/download.html</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Files-Excluded: */libdivsufsort</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Files: *</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -53,7 +53,8 @@ Copyright: 1998 John Lapeyre <lapeyre@physics.arizona.edu></td>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> 2008-2012 Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> Charles Plessy <plessy@debian.org></span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> 2010 Eric Talevich <etal@uga.edu>,</span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="plaintext"> Steffen Möller <moeller@debian.org></span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> 2010 Steffen Möller <moeller@debian.org></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> 2012-2017 Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext">License: GPL-3</span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext">License: GPL-3</span>
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<a href="https://salsa.debian.org/med-team/hmmer/commit/19e9aa4d89e285014ff5a55b8715ad4b39985163#68ef9f98c01c7eecd4c605cc26048a06f3304b79"><strong>debian/watch</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">version=<span class="idiff left right">3</span></span>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">version=<span class="idiff left right">4</span></span>
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \</span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> <span class="idiff left right">ftp://selab.janelia.org/pub/software/hmmer3/CURRENT/hmmer-([0-9\.abc]*</span>)\.tar\.gz</span></pre>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> <span class="idiff left right">http://hmmer.org/download.html .*/hmmer.*/.*/hmmer-(\d[^-]+</span>)\.tar\.gz</span></pre>
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