<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Alexandre Mestiashvili pushed to branch master
at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/9c61fb6168c04216f754fd453d744e26bc1e4aac">9c61fb61</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-04-04T16:50:35+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.1+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/6cf49bb56d3085886230214cc2e818067823009d">6cf49bb5</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-04-04T16:51:19+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.6.1+dfsg'
Update to upstream version '1.6.1+dfsg'
with Debian dir 354b3a71da1fc74764ff9f1c4305fe55cfae8140</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/9916f97e6a02ea3e7c3b8741198cd25a2ce700da">9916f97e</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-04-04T16:54:39+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update d/control, bump Policy to 4.1.3, fix Vcs-* fields to point to salsa
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/829e5a04178e73f65d470f84ac04fb8471f2af0d">829e5a04</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-04-04T17:01:17+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/f42e19345ace2ab9486adc73dcb7d0dd285729e4">f42e1934</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-04-04T17:04:51+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update copyright years
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/6cc3e31d4d989c659630cce5f634b36779251bce">6cc3e31d</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-04-04T19:15:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update changelog, prepare for release
Gbp-Dch: Ignore
</pre>
</li>
</ul>
<h4>24 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#e5dd98c113be2752e1d0ece7dd39cb253d83216c">
debian/patches/arch_specific_flags.patch
</a>
</li>
<li class="file-stats">
<a href="#fb9e8d937d72f3a26397728040ed9ba05f3aea89">
debian/patches/fix_ftbfs_kfreebsd.patch
</a>
</li>
<li class="file-stats">
<a href="#738bfe9eb140bee362e519ae990e19d7391f9b5f">
debian/patches/typo.patch
</a>
</li>
<li class="file-stats">
<a href="#9b9715372d0cd39d21711a077b6f2ae42fb45135">
doc/SubreadUsersGuide.tex
</a>
</li>
<li class="file-stats">
<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
</a>
</li>
<li class="file-stats">
<a href="#c5bb90e41c35273ab5b21defedfdb01254fbc8f6">
src/Makefile.FreeBSD
</a>
</li>
<li class="file-stats">
<a href="#c1b8d333291fcba8482e6874c5a8cf61b565242c">
src/Makefile.Linux
</a>
</li>
<li class="file-stats">
<a href="#0f0909639769aa3e7d493b832c416371ba8f6089">
src/Makefile.MacOS
</a>
</li>
<li class="file-stats">
<a href="#03b53aa7b28dab0125f2bb23f06f341cab6c608d">
src/SNPCalling.c
</a>
</li>
<li class="file-stats">
<a href="#a966c1ca8483a9cb0ae68bb1172555b63158c468">
src/SUBindel.c
</a>
</li>
<li class="file-stats">
<a href="#ade674f549387241fd4f0491301f7758451ef484">
src/build-sam-index.c
</a>
</li>
<li class="file-stats">
<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
</a>
</li>
<li class="file-stats">
<a href="#ecc92c74c51f8b1692fd1bd13b9657e456522c0a">
src/core-interface-aligner.c
</a>
</li>
<li class="file-stats">
<a href="#431a9a7f741eae0019b2785bf4ae504ca6fe0271">
src/core-interface-subjunc.c
</a>
</li>
<li class="file-stats">
<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
</a>
</li>
<li class="file-stats">
<a href="#4db02b816f2ce650b526f0903f40471e89ca152a">
src/core-junction.h
</a>
</li>
<li class="file-stats">
<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
</a>
</li>
<li class="file-stats">
<a href="#3ff152fe6bda3f5dfee9715abff394de66921551">
src/core.h
</a>
</li>
<li class="file-stats">
<a href="#cb694fb45e0f09c24c9a2441c1640b76efdf7b88">
src/coverage_calc.c
</a>
</li>
<li class="file-stats">
<a href="#08ec1eca3761439e06c59fe3179a2eb515dfacb1">
<span class="new-file">
+
src/detection-calls.c
</span>
</a>
</li>
<li class="file-stats">
<a href="#18d5c843fdde01c811087dacdcf7dbe1f38af4d3">
src/gene-algorithms.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">
—
<br>
<a href="https://salsa.debian.org/med-team/subread/compare/27f92f1a09fc1f774ba60579de3224bb881b231b...6cc3e31d4d989c659630cce5f634b36779251bce">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>