[Debian-med-packaging] dialign-t_1.0.0-1_powerpc.changes is NEW
installer at ftp-master.debian.org
Wed May 7 05:32:02 UTC 2008
(new) dialign-tx-data_1.0.0-1_all.deb optional science
Common data files for dialign-tx
This package contain the score matrices and probability distribution files
that DIALIGN-TX needs to align peptidic and nucleic sequences.
(new) dialign-tx_1.0.0-1_powerpc.deb optional science
Segment-based multiple sequence alignment
DIALIGN-TX is a command line tool to perform multiple alignment of protein or
DNA sequences. It is a complete reimplementation of the segment-base approach
including several new improvements and heuristics that significantly enhance
the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T.
For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that
favours chains of low-scoring local alignments over isolated high-scoring
fragments. For multiple alignment, DIALIGN-TX uses an improved greedy
procedure that is less sensitive to spurious local sequence similarities.
DIALIGN-TX has been published in Amarendran R. Subramanian, Michael Kaufmann,
Burkhard Morgenstern: Improvement of the segment-based approach for multiple
sequence alignment by combining greedy and progressive alignment strategies.
Submission in Progress, 2008.
Changes: dialign-t (1.0.0-1) unstable; urgency=low
[ David Paleino ]
* Updated to Standards-Version 3.7.3 (no changes needed)
[ Charles Plessy ]
* New upstream version, renamed DIALIGN-TX.
* debian/control: Enhances: t-coffee.
- Converted to machine-readable format.
- Updated relevant copyrights for 2008.
* Updated my email address.
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