[Debian-med-packaging] Bug#533976: bioperl test failures not reproduced with cowbuilder.

[Charles Plessy]

Le Sun, Jun 21, 2009 at 04:22:38PM +0200, Lucas Nussbaum a écrit :
> > t/SearchIO/blastxml..........................dubious
> > 	Test returned status 255 (wstat 65280, 0xff00)
> > DIED. FAILED tests 148-298
> > 	Failed 151/298 tests, 49.33% okay
> > t/SeqIO/bsml_sax.............................dubious
> > 	Test returned status 255 (wstat 65280, 0xff00)
> > DIED. FAILED tests 2-15
> > 	Failed 14/15 tests, 6.67% okay
> > Failed 2/318 test scripts. 165/16485 subtests failed.
> > Files=318, Tests=16485, 172 wallclock secs (81.32 cusr +  6.65 csys = 87.97 CPU)
> > make: *** [build-stamp] Error 255
> 
> The full build log is available from:
>    http://people.debian.org/~lucas/logs/2009/06/20/bioperl_1.6.0-2_lsid64.buildlog

Bonjour Lucas,

thanks a lot for your QA efforts, they really impress me.

In the case of the above errors, I did not reproduce them in a Sid cowbuilder
this morning. The two tests have in common XML parsing… Do you think that there
could be things preinstalled in your chroot that makes the parsing fail? I have
not found significant differences in the list of installed build-dependancies.

--- charles	2009-06-22 09:09:49.000000000 +0900
+++ lucas	2009-06-22 09:08:19.000000000 +0900
@@ -63,7 +63,9 @@
 libpango1.0-0
 libpango1.0-common
 libparse-recdescent-perl
+libpcre3
 libpixman-1-0
+libpng12-0
 libpopt0
 libpostscript-perl
 libset-scalar-perl
@@ -71,6 +73,7 @@
 libsoap-lite-perl
 libspreadsheet-parseexcel-perl
 libspreadsheet-writeexcel-perl
+libssl0.9.8
 libstatistics-descriptive-perl
 libsvg-graph-perl
 libsvg-perl

Have a nice day,

-- 
Charles Plessy
Debian Med packaging team,
http://www.debian.org/devel/debian-med
Tsurumi, Kanagawa, Japan