[Debian-med-packaging] tophat updated version

[Alex Mestiashvili]

Hi Andreas,
On 04/16/2012 01:50 PM, Andreas Tille wrote:
> On Sat, Apr 14, 2012 at 01:11:51PM +0200, Alex Mestiashvili wrote:
>   
>> One question: pristine-tar branch still contains tophat source with
>> SeqAn distribution, but I removed license statements for SeqAn from
>> debian/copyright because we use one distributed in Debian.
>> Is it acceptable?
>>     
> For the moment, yes.
>
>   
>> For the future I've prepared debian/get-orig-source which suppose to
>> strip off seqan from the tarball.
>>     
> That's better.  However, are you *really* sure you are using Debian
> packaged seqan?  The build log contains a lot of:
>
>    ..  -I./SeqAn-1.3 ...
>
>   
I could build it with removed src/SeqAn-1.3 directory.
The include is useless, but harmless
because seqan includes were fixed with fix_includes_path.patch

Best regards,
Alex

> Kind regards
>
>        Andreas.
>
>