[Debian-med-packaging] Bug#655784: plastimatch: FTBFS: libITKIO.so: undefined reference to `gdcm::PixmapToPixmapFilter::SetInput(gdcm::Pixmap const&)'

[Lucas Nussbaum]

Source: plastimatch
Version: 1.5.5+dfsg0-2
Severity: serious
Tags: wheezy sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20120112 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
> /usr/bin/c++     -ftemplate-depth-50 -Wall -Wno-deprecated -O3 -DNDEBUG -fPIC     -fopenmp -ldl CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o  -o ../../merge_vfs -rdynamic -L/build/plastimatch-1qJADo/plastimatch-1.5.5+dfsg0/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1qJADo/plastimatch-1.5.5+dfsg0/obj-x86_64-linux-gnu/libs/bstrlib-05122010 -L/build/plastimatch-1qJADo/plastimatch-1.5.5+dfsg0/obj-x86_64-linux-gnu/libs/nocedal -L/usr/lib/InsightToolkit -L/tmp/buildd/gdcm-2.0.19/obj-x86_64-linux-gnu/bin/. -L/usr/include ../../libplastimatch1.a -lITKAlgorithms -lITKStatistics -lITKFEM ../../libgpuit.a ../../libs/liblbfgs-1.9/liblbfgs.a ../../libs/nocedal/libnocedal.a ../../libplmsys.a -lfftw3f -lfftw3 -lgfortran -lm -lITKNumerics -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads -litkNetlibSlatec -lITKBasicFilters -lITKIO -lITKNrrdIO /usr/lib/libgdcmMSFF.so.2.0.19 /usr/lib/libgdcmDICT.so.2.0.19 /usr/lib/libgdcmIOD.so.2.0.19 /usr/lib/libgdcmDSED.so.2.0.19 /usr/lib/libgdcmCommon.so.2.0.19 -litkjpeg8 -lpng -ltiff -lITKSpatialObject -lITKMetaIO -lITKDICOMParser -lITKEXPAT -lITKniftiio -lITKznz -lz -lITKTransformIOReview -lITKCommon -litkvnl_inst -litkvnl_algo -litkv3p_netlib -litkvnl -litkvcl -litkv3p_lsqr -lm -litksys -lpthread -ldl ../../libs/bstrlib-05122010/libbstrlib.a -lm -lgfortran -lquadmath 
> /usr/lib/gcc/x86_64-linux-gnu/4.6/../../../../lib/libITKIO.so: undefined reference to `gdcm::PixmapToPixmapFilter::SetInput(gdcm::Pixmap const&)'
> collect2: ld returned 1 exit status

The full build log is available from:
   http://people.debian.org/~lucas/logs/2012/01/12/plastimatch_1.5.5+dfsg0-2_lsid64.buildlog

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot.  Internet was not
accessible from the build systems.