[Debian-med-packaging] Bug#676743: r-cran-rocr: FTBFS: ** Creating default NAMESPACE file

Lucas Nussbaum lucas at lucas-nussbaum.net
Sat Jun 9 08:18:34 UTC 2012


Source: r-cran-rocr
Version: 1.0-4-3
Severity: serious
Tags: wheezy sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20120609 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
>  fakeroot debian/rules binary
> test -x debian/rules
> dh_testroot
> dh_prep 
> dh_installdirs -A 
> mkdir -p "."
> dh_installdirs		usr/lib/R/site-library
> echo "R:Depends=r-base-core (>= 2.15.0-2)" >> debian/r-cran-rocr.substvars
> if test -f /usr/bin/xvfb-run; then 			\
> 			 xvfb-run -a 			\
> 				R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-cran-rocr/usr/lib/R/site-library --clean     \
> 					 . ;	\
> 		else							\
> 			 R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-cran-rocr/usr/lib/R/site-library 	\
> 					--clean  . ;\
> 		fi
> * installing *source* package 'ROCR' ...
> ** Creating default NAMESPACE file
> ** R
> ** data
> ** demo
> ** preparing package for lazy loading
> Error : object 'nobs' is not exported by 'namespace:gdata'
> Error : package 'gplots' could not be loaded
> ERROR: lazy loading failed for package 'ROCR'
> * removing '/«PKGBUILDDIR»/debian/r-cran-rocr/usr/lib/R/site-library/ROCR'
> make: *** [R_any_arch] Error 1

The full build log is available from:
   http://people.debian.org/~lucas/logs/2012/06/09/r-cran-rocr_1.0-4-3_unstable.log

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.





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