[Debian-med-packaging] fasttree_2.1.4-1_amd64.changes is NEW

Debian FTP Masters ftpmaster at ftp-master.debian.org
Fri Jun 15 18:18:27 UTC 2012


(new) fasttree_2.1.4-1.debian.tar.gz extra science
(new) fasttree_2.1.4-1.dsc extra science
(new) fasttree_2.1.4-1_amd64.deb extra science
phylogenetic trees from alignments of nucleotide or protein sequences
 FastTree infers approximately-maximum-likelihood phylogenetic trees from
 alignments of nucleotide or protein sequences. It handles alignments
 with up to a million of sequences in a reasonable amount of time and
 memory. For large alignments, FastTree is 100-1,000 times faster than
 PhyML 3.0 or RAxML 7.
 .
 FastTree is more accurate than PhyML 3 with default settings, and much
 more accurate than the distance-matrix methods that are traditionally
 used for large alignments. FastTree uses the Jukes-Cantor or generalized
 time-reversible (GTR) models of nucleotide evolution and the JTT
 (Jones-Taylor-Thornton 1992) model of amino acid evolution. To account
 for the varying rates of evolution across sites, FastTree uses a single
 rate for each site (the "CAT" approximation). To quickly estimate the
 reliability of each split in the tree, FastTree computes local support
 values with the Shimodaira-Hasegawa test (these are the same as PhyML 3's
 "SH-like local supports").
 .
 This package contains a single threaded version (fasttree) and a
 parallel version which uses OpenMP (fasttreMP).
(new) fasttree_2.1.4.orig.tar.gz extra science


Changes:
fasttree (2.1.4-1) unstable; urgency=low
 .
  * Initial release (Closes: #677648)


Override entries for your package:

Announcing to debian-devel-changes at lists.debian.org
Closing bugs: 677648 


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