[Debian-med-packaging] uscan not downloading new upstream version of bowtie2

[Alex Mestiashvili]

Hi Andreas,

thank you, I just was about to upload it too :)
It also seems that you didn't push the latest changes - d/changelog at 
least,  to git.
I'll check the new version of gmap right now.
Best regards,
Alex


On 10/26/2014 08:30 AM, Andreas Tille wrote:
> Hi Alex,
>
> since you provided some tests in Git I was able to run these tests
> successfully and thus I simply uploaded this new version.
>
> Perhaps this saves you some time which you might like to spent into the
> latest version of gmap (you dropped a note that the test does not run on
> i386 in d/changelog).  I injected the last upstream version into Git
> but will not upload.
>
> Kind regards
>
>          Andreas.
>
> On Sun, Oct 26, 2014 at 07:18:23AM +0100, Andreas Tille wrote:
>> Hi Alex,
>>
>> thanks for noticing!
>>
>> On Sat, Oct 25, 2014 at 11:38:11PM +0200, Alex Mestiashvili wrote:
>>> Hi All,
>>>
>>> I am facing a strange issue with uscan.
>>>
>>> here is the output:
>>> ~/debian-med/bowtie2$ uscan --verbose
>>> -- Scanning for watchfiles in .
>>> -- Found watchfile in ./debian
>>> -- In debian/watch, processing watchfile line:
>>>     opts=filenamemangle=s/(.*)(-source)(\..*$)/$1$3/
>>> http://sf.net/bowtie-bio/bowtie2-([\d\.]+)\-source\.zip
>>> -- Found the following matching hrefs:
>>>       /watch/sf.php/bowtie-bio/bowtie2-2.2.4-source.zip (2.2.4)
>>> ...
>>>       /watch/sf.php/bowtie-bio/bowtie2-2.0.1-source.zip (2.0.1)
>>> Newest version on remote site is 2.2.4, local version is 2.2.3
>>>   => Newer version available from
>>>      https://qa.debian.org/watch/sf.php/bowtie-bio/bowtie2-2.2.4-source.zip
>>> -- Downloading updated package /watch/sf.php/bowtie-bio/bowtie2-2.2.4.zip
>>> -- Checking for common possible upstream OpenPGP signatures
>>> Could not read
>>> ../tarballs//watch/sf.php/bowtie-bio/bowtie2-2.2.4.zip: No such file
>>> or directory at /usr/bin/mk-origtargz line 316.
>>> uscan: error: mk-origtargz --package bowtie2 --version 2.2.4
>>> --compression gzip --directory ../tarballs --copyright-file
>>> debian/copyright
>>> ../tarballs//watch/sf.php/bowtie-bio/bowtie2-2.2.4.zip gave error
>>> exit status 2
>>>
>>> the problem as far as I see is that the file is not downloaded.
>> Same here.
>>
>>> If i try to get it with wget then I see a number of redirects before
>>> the download:
>>>
>>> wget https://qa.debian.org/watch/sf.php/bowtie-bio/bowtie2-2.2.4-source.zip
>>> --2014-10-25 23:33:35-- https://qa.debian.org/watch/sf.php/bowtie-bio/bowtie2-2.2.4-source.zip
>>> Resolving qa.debian.org (qa.debian.org)... 5.153.231.28,
>>> 2001:41c8:1000:21::21:28
>>> ...
>>> Connecting to skylink.dl.sourceforge.net
>>> (skylink.dl.sourceforge.net)|109.230.212.53|:80... connected.
>>> HTTP request sent, awaiting response... 200 OK
>>> Length: 5725498 (5.5M) [application/octet-stream]
>>> Saving to: ‘bowtie2-2.2.4-source.zip’
>>> ...
>>>
>>> here is the d/watch:
>>>
>>>   http://anonscm.debian.org/cgit/debian-med/bowtie2.git/tree/debian/watch
>>>
>>> Any hint ?
>> I do not think that this is an issue of our watch file but rather a problem of
>> uscan.  I downloaded bowtie2 via wget and used
>>
>>     mk-origtargz --repack --compress xz /home/andreas/Downloads/bowtie2-2.2.4-source.zip
>>
>> to create the tarball which I importet into our repository. Please git pull
>> check the result and upload (or ping me if you might not manage today since
>> this evening the upload window for Jessie will close today).
>>
>> Kind regards
>>
>>          Andreas.
>>
>> -- 
>> http://fam-tille.de
>>
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