[Debian-med-packaging] Bug#926995: ITP: umis -- tools for processing UMI RNA-tag data

Andreas Tille tille at debian.org
Sat Apr 13 09:28:43 BST 2019


Package: wnpp
Severity: wishlist

Subject: ITP: umis -- tools for processing UMI RNA-tag data
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : umis
  Version         : 1.0.3
  Upstream Author : Valentine Svensson
* URL             : https://github.com/vals/umis
* License         : MIT
  Programming Lang: Python
  Description     : tools for processing UMI RNA-tag data
 Umis provides tools for estimating expression in RNA-Seq data which
 performs sequencing of end tags of transcript, and incorporate molecular
 tags to correct for amplification bias.
 .
 There are four steps in this process.
 .
  1. Formatting reads
  2. Filtering noisy cellular barcodes
  3. Pseudo-mapping to cDNAs
  4. Counting molecular identifiers

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/umis



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