[Debian-med-packaging] Bug#1055505: closed by Debian FTP Masters <ftpmaster at ftp-master.debian.org> (reply to Andreas Tille <tille at debian.org>) (Bug#1055505: fixed in python-pysam 0.22.0+ds-1)

Matthias Klose doko at debian.org
Thu Nov 9 10:11:36 GMT 2023


Control: reopen -1

On 08.11.23 11:09, Debian Bug Tracking System wrote:
> This is an automatic notification regarding your Bug report
> which was filed against the src:python-pysam package:
> 
> #1055505: python-pysam new upstream needed to build with Python 3.12

sorry I was wrong about that. still ftbfs with 3.12 full build log at
https://launchpadlibrarian.net/696786826/buildlog_ubuntu-noble-amd64.python-pysam_0.22.0+ds-1_BUILDING.txt.gz

[...]
pysam/libchtslib.c: In function ‘__pyx_f_5pysam_10libchtslib_set_verbosity’:
pysam/libchtslib.c:1387:32: error: ‘_PyCFrame’ has no member named 
‘use_tracing’
  1387 |      (unlikely((tstate)->cframe->use_tracing) &&\
       |                                ^~
pysam/libchtslib.c:958:43: note: in definition of macro ‘unlikely’
   958 |   #define unlikely(x) __builtin_expect(!!(x), 0)
       |                                           ^
pysam/libchtslib.c:1426:15: note: in expansion of macro ‘__Pyx_IsTracing’
  1426 |           if (__Pyx_IsTracing(tstate, 1, 1)) {\
       |               ^~~~~~~~~~~~~~~
pysam/libchtslib.c:2783:3: note: in expansion of macro ‘__Pyx_TraceCall’
  2783 |   __Pyx_TraceCall("set_verbosity", __pyx_f[0], 53, 0, 
__PYX_ERR(0, 53, __pyx_L1_error));
       |   ^~~~~~~~~~~~~~~
pysam/libchtslib.c:1387:32: error: ‘_PyCFrame’ has no member named 
‘use_tracing’
  1387 |      (unlikely((tstate)->cframe->use_tracing) &&\
       |                                ^~
pysam/libchtslib.c:958:43: note: in definition of macro ‘unlikely’
   958 |   #define unlikely(x) __builtin_expect(!!(x), 0)
       |                                           ^
pysam/libchtslib.c:1434:11: note: in expansion of macro ‘__Pyx_IsTracing’
  1434 |       if (__Pyx_IsTracing(tstate, 1, 1)) {\
       |           ^~~~~~~~~~~~~~~
pysam/libchtslib.c:2783:3: note: in expansion of macro ‘__Pyx_TraceCall’
  2783 |   __Pyx_TraceCall("set_verbosity", __pyx_f[0], 53, 0, 
__PYX_ERR(0, 53, __pyx_L1_error));
       |   ^~~~~~~~~~~~~~~
pysam/libchtslib.c:1387:32: error: ‘_PyCFrame’ has no member named 
‘use_tracing’
  1387 |      (unlikely((tstate)->cframe->use_tracing) &&\
       |                                ^~
pysam/libchtslib.c:958:43: note: in definition of macro ‘unlikely’
[...]



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