[python-scientific] branch master updated (23e4f3b -> abad490)

[Frédéric-Emmanuel Picca]

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picca pushed a change to branch master
in repository python-scientific.

      from  23e4f3b   handled the link to directory conversion done with the last upload for mpich2python and openmpipython documentation (Closes: #720150)
       new  f087719   Imported Upstream version 2.9.3
       new  c7ab871   Merge tag 'upstream/2.9.3'
       new  cd99505   refresh the patch queue
       new  e1d80cd   bump standard-Versions 3.9.5
       new  3efcafa   regenerate the cython files
       new  07afc2f   the netcdf modules changed is location
       new  abad490   Execute the test suite during the build

The 7 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Doc/CHANGELOG                                      |   25 +
 Include/Scientific/numeric.pxi                     |   36 -
 MANIFEST.in                                        |    5 +-
 PKG-INFO                                           |    2 +-
 Scientific/BSP/__init__.py                         |    6 +-
 Scientific/BSP/core.py                             |   48 +-
 Scientific/Clustering/AffinityPropagation.py       |    5 +-
 Scientific/FFT.py                                  |   46 +-
 Scientific/Functions/Derivatives.py                |    2 +
 Scientific/Functions/FirstDerivatives.py           |    2 +
 Scientific/Functions/Interpolation.py              |    5 +-
 Scientific/Functions/Polynomial.py                 |    2 +
 Scientific/Functions/Rational.py                   |    2 +
 Scientific/Geometry/Quaternion.py                  |    2 +
 Scientific/Geometry/TensorModule.py                |    2 +
 Scientific/Geometry/VectorModule.py                |    2 +
 Scientific/Geometry/__init__.py                    |   10 +-
 Scientific/IO/NetCDF.py                            |    9 +-
 Scientific/IO/PDB.py                               |   66 +-
 Scientific/LA.py                                   |   23 +-
 Scientific/N.py                                    |   44 +-
 Scientific/NRNG.py                                 |   19 +-
 Scientific/NumberDict.py                           |    2 +
 Scientific/Physics/PhysicalQuantities.py           |    4 +
 Scientific/__init__.py                             |   11 -
 Scientific/__pkginfo__.py                          |    2 +-
 Scientific/_affinitypropagation.c                  | 6195 +++++++++++++
 .../_affinitypropagation.pyx                       |   34 +-
 Scientific/_interpolation.c                        | 5730 ++++++++++++
 .../_interpolation.pyx                             |   24 +-
 Src/Scientific_netcdf.c => Scientific/_netcdf.c    |    8 +-
 Scientific/_vector.c                               | 9518 ++++++++++++++++++++
 .../_vector.pyx                                    |   16 +-
 Src/MPI/Scientific_mpi.c                           |    6 +-
 Src/MPI/compile.py                                 |    4 +-
 Src/Scientific_affinitypropagation.c               |  637 --
 Src/Scientific_interpolation.c                     |  489 -
 Src/Scientific_numerics_package_id.c               |  180 -
 Src/Scientific_numerics_package_id.pyx             |   12 -
 Src/Scientific_vector.c                            | 2443 -----
 Tests/vector_tests.py                              |    4 +-
 debian/changelog                                   |   17 +
 debian/control                                     |    5 +-
 ...h => 0001-debian-deal-with-mpi-compilers.patch} |   13 +-
 .../0001-replace-PyObject_NEW-Pyobject_new.patch   |   54 -
 ...eature-forwarded-numpy-arrayobject-header.patch |   24 -
 debian/patches/series                              |    4 +-
 debian/python-netcdf.install                       |    2 +-
 debian/rules                                       |   16 +
 setup.py                                           |   77 +-
 50 files changed, 21733 insertions(+), 4161 deletions(-)
 delete mode 100644 Include/Scientific/numeric.pxi
 create mode 100644 Scientific/_affinitypropagation.c
 rename Src/Scientific_affinitypropagation.pyx => Scientific/_affinitypropagation.pyx (55%)
 create mode 100644 Scientific/_interpolation.c
 rename Src/Scientific_interpolation.pyx => Scientific/_interpolation.pyx (71%)
 rename Src/Scientific_netcdf.c => Scientific/_netcdf.c (99%)
 create mode 100644 Scientific/_vector.c
 rename Src/Scientific_vector.pyx => Scientific/_vector.pyx (95%)
 delete mode 100644 Src/Scientific_affinitypropagation.c
 delete mode 100644 Src/Scientific_interpolation.c
 delete mode 100644 Src/Scientific_numerics_package_id.c
 delete mode 100644 Src/Scientific_numerics_package_id.pyx
 delete mode 100644 Src/Scientific_vector.c
 rename debian/patches/{0002-debian-deal-with-mpi-compilers.patch => 0001-debian-deal-with-mpi-compilers.patch} (79%)
 delete mode 100644 debian/patches/0001-replace-PyObject_NEW-Pyobject_new.patch
 delete mode 100644 debian/patches/0003-feature-forwarded-numpy-arrayobject-header.patch

-- 
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