[vmtk] 01/01: Imported Debian patch 1.3-1
Mattia Rizzolo
mattia at debian.org
Sun Apr 17 14:46:13 UTC 2016
This is an automated email from the git hooks/post-receive script.
mattia pushed a commit to branch master
in repository vmtk.
commit 7cb28cc97e7c7a198b0a5b2a2ea45079b0cbd083
Merge: e14ee88 405ba02
Author: Gianfranco Costamagna <locutusofborg at debian.org>
Date: Sat Apr 16 23:09:46 2016 +0200
Imported Debian patch 1.3-1
CMakeInput/VMTKConfig.cmake.in | 29 +
CMakeInput/VMTKUse.cmake.in | 9 +
CMakeLists.txt | 277 +
Copyright.txt | 834 +
LICENSE | 8 +
PypeS/CMakeLists.txt | 60 +
PypeS/LICENCE | 28 +
PypeS/pype.py | 304 +
PypeS/pypebatch.py | 107 +
PypeS/pypepad.py | 580 +
PypeS/pyperun.py | 44 +
PypeS/pypes.py | 11 +
PypeS/pypescript.py | 644 +
PypeS/pypeserver.py | 85 +
PypeS/pypetest.py | 89 +
PypeS/pypetestrunner.py | 197 +
PypeS/pypewrapper.py | 238 +
README | 9 +
SuperBuild.cmake | 221 +
__init__.py.in | 1 +
debian/changelog | 13 +-
debian/compat | 2 +-
debian/control | 12 +-
debian/copyright | 142 +-
debian/watch | 3 +-
distribution/CMakeLists.txt | 212 +
distribution/bundle/CustomVolumeIcon.icns | Bin 0 -> 37827 bytes
distribution/bundle/Info.plist.in | 28 +
distribution/bundle/vmtk-startup | 21 +
distribution/bundle/vmtk.icns | Bin 0 -> 30250 bytes
distribution/egg/HOWTO | 33 +
distribution/egg/PKG-INFO | 33 +
distribution/egg/README | 7 +
distribution/egg/setup.py | 122 +
distribution/egg/vmtk-icon.ico | Bin 0 -> 89562 bytes
distribution/egg/vmtk_post_install.py | 28 +
distribution/egg/windows_dll/i386/msvcp110.dll | Bin 0 -> 534480 bytes
distribution/egg/windows_dll/i386/msvcr110.dll | Bin 0 -> 862664 bytes
distribution/egg/windows_dll/i386/vccorlib110.dll | Bin 0 -> 251864 bytes
distribution/egg/windows_dll/x8664/msvcp110.dll | Bin 0 -> 661448 bytes
distribution/egg/windows_dll/x8664/msvcr110.dll | Bin 0 -> 828872 bytes
distribution/egg/windows_dll/x8664/vccorlib110.dll | Bin 0 -> 354264 bytes
distribution/homebrew/vmtk.rb | 65 +
distribution/nsis/mingw-postinst.bat | 18 +
distribution/nsis/postinst.bat | 11 +
distribution/nsis/vmtk-icon.tiff | Bin 0 -> 10254 bytes
distribution/nsis/vmtk-startup.bat | 6 +
distribution/scripts/getbuildvmtk.py | 270 +
vmtk.py | 100 +
.../clipvoronoidiagram.py | 282 +
.../paralleltransportvoronoidiagram.py | 532 +
.../patchandinterpolatecenterlines.py | 488 +
vmtkScripts/CMakeLists.txt | 190 +
vmtkScripts/contrib/CMakeLists.txt | 60 +
vmtkScripts/contrib/vmtkboundarylayer2.py | 141 +
vmtkScripts/contrib/vmtkcontribscripts.py | 21 +
.../contrib/vmtkdijkstradistancetopoints.py | 303 +
vmtkScripts/contrib/vmtkdistancetospheres.py | 374 +
vmtkScripts/contrib/vmtkentityrenumber.py | 87 +
.../contrib/vmtkgeodesicsurfaceresolution.py | 352 +
vmtkScripts/contrib/vmtkmeshaddexternallayer.py | 262 +
vmtkScripts/contrib/vmtkmeshclipcenterlines.py | 655 +
vmtkScripts/contrib/vmtkmeshmerge.py | 72 +
vmtkScripts/contrib/vmtkmeshtetrahedralize2.py | 71 +
vmtkScripts/contrib/vmtkmeshviewer2.py | 297 +
vmtkScripts/contrib/vmtkmeshwriter2.py | 361 +
.../contrib/vmtksurfaceextractannularwalls.py | 134 +
.../contrib/vmtksurfaceextractinnercylinder.py | 127 +
vmtkScripts/contrib/vmtksurfaceresolution.py | 343 +
vmtkScripts/contrib/vmtksurfacewriter2.py | 227 +
vmtkScripts/contrib/vmtkthreshold.py | 73 +
vmtkScripts/vmtkactivetubes.py | 92 +
vmtkScripts/vmtkbifurcationprofiles.py | 94 +
vmtkScripts/vmtkbifurcationreferencesystems.py | 77 +
vmtkScripts/vmtkbifurcationsections.py | 154 +
vmtkScripts/vmtkbifurcationvectors.py | 121 +
vmtkScripts/vmtkboundarylayer.py | 129 +
vmtkScripts/vmtkboundaryreferencesystems.py | 77 +
vmtkScripts/vmtkbranchclipper.py | 154 +
vmtkScripts/vmtkbranchextractor.py | 78 +
vmtkScripts/vmtkbranchgeometry.py | 98 +
vmtkScripts/vmtkbranchmapping.py | 129 +
vmtkScripts/vmtkbranchmetrics.py | 120 +
vmtkScripts/vmtkbranchpatching.py | 103 +
vmtkScripts/vmtkbranchsections.py | 118 +
vmtkScripts/vmtkcenterlineattributes.py | 68 +
vmtkScripts/vmtkcenterlinegeometry.py | 98 +
vmtkScripts/vmtkcenterlineinterpolation.py | 125 +
vmtkScripts/vmtkcenterlinelabeler.py | 152 +
vmtkScripts/vmtkcenterlinemerge.py | 81 +
vmtkScripts/vmtkcenterlinemeshsections.py | 105 +
vmtkScripts/vmtkcenterlinemodeller.py | 80 +
vmtkScripts/vmtkcenterlineoffsetattributes.py | 152 +
vmtkScripts/vmtkcenterlineresampling.py | 63 +
vmtkScripts/vmtkcenterlines.py | 672 +
vmtkScripts/vmtkcenterlinesections.py | 88 +
vmtkScripts/vmtkcenterlinesmoothing.py | 65 +
vmtkScripts/vmtkcenterlineviewer.py | 177 +
vmtkScripts/vmtkdelaunayvoronoi.py | 249 +
vmtkScripts/vmtkdistancetocenterlines.py | 112 +
vmtkScripts/vmtkendpointextractor.py | 85 +
vmtkScripts/vmtkflowextensions.py | 184 +
vmtkScripts/vmtkicpregistration.py | 134 +
vmtkScripts/vmtkimagebinarize.py | 70 +
vmtkScripts/vmtkimagecast.py | 89 +
vmtkScripts/vmtkimagecompare.py | 101 +
vmtkScripts/vmtkimagecompose.py | 85 +
vmtkScripts/vmtkimagecurvedmpr.py | 85 +
vmtkScripts/vmtkimagefeaturecorrection.py | 86 +
vmtkScripts/vmtkimagefeatures.py | 205 +
vmtkScripts/vmtkimageinitialization.py | 518 +
vmtkScripts/vmtkimagemipviewer.py | 120 +
vmtkScripts/vmtkimagemorphology.py | 78 +
vmtkScripts/vmtkimagenormalize.py | 63 +
vmtkScripts/vmtkimageobjectenhancement.py | 101 +
vmtkScripts/vmtkimageotsuthresholds.py | 81 +
vmtkScripts/vmtkimagereader.py | 352 +
vmtkScripts/vmtkimagereslice.py | 150 +
vmtkScripts/vmtkimageseeder.py | 204 +
vmtkScripts/vmtkimageshiftscale.py | 124 +
vmtkScripts/vmtkimagesmoothing.py | 70 +
vmtkScripts/vmtkimagevesselenhancement.py | 198 +
vmtkScripts/vmtkimageviewer.py | 183 +
vmtkScripts/vmtkimagevoipainter.py | 245 +
vmtkScripts/vmtkimagevoiselector.py | 231 +
vmtkScripts/vmtkimagewriter.py | 280 +
vmtkScripts/vmtklevelsetsegmentation.py | 388 +
vmtkScripts/vmtklineartoquadratic.py | 108 +
vmtkScripts/vmtklineresampling.py | 69 +
vmtkScripts/vmtklocalgeometry.py | 183 +
vmtkScripts/vmtkmarchingcubes.py | 80 +
vmtkScripts/vmtkmesharrayoperation.py | 104 +
vmtkScripts/vmtkmeshboundaryinspector.py | 170 +
vmtkScripts/vmtkmeshbranchclipper.py | 154 +
vmtkScripts/vmtkmeshclipper.py | 162 +
vmtkScripts/vmtkmeshcompare.py | 145 +
vmtkScripts/vmtkmeshconnectivity.py | 87 +
vmtkScripts/vmtkmeshcutter.py | 131 +
vmtkScripts/vmtkmeshdatareader.py | 352 +
vmtkScripts/vmtkmeshextractpointdata.py | 82 +
vmtkScripts/vmtkmeshgenerator.py | 365 +
vmtkScripts/vmtkmeshlambda2.py | 73 +
vmtkScripts/vmtkmeshlinearize.py | 62 +
vmtkScripts/vmtkmeshmergetimesteps.py | 211 +
vmtkScripts/vmtkmeshpolyballevaluation.py | 84 +
vmtkScripts/vmtkmeshprojection.py | 65 +
vmtkScripts/vmtkmeshreader.py | 339 +
vmtkScripts/vmtkmeshscaling.py | 62 +
vmtkScripts/vmtkmeshtetrahedralize.py | 61 +
vmtkScripts/vmtkmeshtosurface.py | 65 +
vmtkScripts/vmtkmeshtransform.py | 98 +
vmtkScripts/vmtkmeshtransformtoras.py | 67 +
vmtkScripts/vmtkmeshvectorfromcomponents.py | 72 +
vmtkScripts/vmtkmeshviewer.py | 202 +
vmtkScripts/vmtkmeshvolume.py | 72 +
vmtkScripts/vmtkmeshvorticityhelicity.py | 80 +
vmtkScripts/vmtkmeshwallshearrate.py | 73 +
vmtkScripts/vmtkmeshwriter.py | 381 +
vmtkScripts/vmtknetworkeditor.py | 894 +
vmtkScripts/vmtknetworkextraction.py | 81 +
vmtkScripts/vmtknetworkwriter.py | 249 +
vmtkScripts/vmtkparticletracer.py | 189 +
vmtkScripts/vmtkpathlineanimator.py | 267 +
vmtkScripts/vmtkpointsplitextractor.py | 89 +
vmtkScripts/vmtkpointtransform.py | 71 +
vmtkScripts/vmtkpolyballmodeller.py | 80 +
vmtkScripts/vmtkpotentialfit.py | 97 +
vmtkScripts/vmtkpythonscript.py | 70 +
vmtkScripts/vmtkrbfinterpolation.py | 100 +
vmtkScripts/vmtkrenderer.py | 334 +
vmtkScripts/vmtkrendertoimage.py | 61 +
vmtkScripts/vmtkscripts.py | 142 +
vmtkScripts/vmtksurfaceappend.py | 59 +
vmtkScripts/vmtksurfacearrayoperation.py | 106 +
vmtkScripts/vmtksurfacearraysmoothing.py | 134 +
vmtkScripts/vmtksurfacebooleanoperation.py | 75 +
vmtkScripts/vmtksurfacecapper.py | 203 +
vmtkScripts/vmtksurfacecelldatatopointdata.py | 58 +
vmtkScripts/vmtksurfacecenterlineprojection.py | 69 +
vmtkScripts/vmtksurfacecliploop.py | 135 +
vmtkScripts/vmtksurfaceclipper.py | 214 +
vmtkScripts/vmtksurfacecompare.py | 140 +
vmtkScripts/vmtksurfaceconnectivity.py | 109 +
vmtkScripts/vmtksurfacecurvature.py | 154 +
vmtkScripts/vmtksurfacedecimation.py | 78 +
vmtkScripts/vmtksurfacedistance.py | 86 +
vmtkScripts/vmtksurfaceendclipper.py | 291 +
vmtkScripts/vmtksurfacekiteremoval.py | 61 +
vmtkScripts/vmtksurfaceloopextraction.py | 151 +
vmtkScripts/vmtksurfacemassproperties.py | 74 +
vmtkScripts/vmtksurfacemodeller.py | 71 +
vmtkScripts/vmtksurfacenormals.py | 76 +
vmtkScripts/vmtksurfacepointdatatocelldata.py | 58 +
vmtkScripts/vmtksurfacepolyballevaluation.py | 84 +
vmtkScripts/vmtksurfaceprojection.py | 62 +
vmtkScripts/vmtksurfacereader.py | 228 +
vmtkScripts/vmtksurfacereferencesystemtransform.py | 142 +
vmtkScripts/vmtksurfaceregiondrawing.py | 176 +
vmtkScripts/vmtksurfaceremeshing.py | 155 +
vmtkScripts/vmtksurfacescaling.py | 72 +
vmtkScripts/vmtksurfacesmoothing.py | 94 +
vmtkScripts/vmtksurfacesubdivision.py | 72 +
vmtkScripts/vmtksurfacetomesh.py | 66 +
vmtkScripts/vmtksurfacetransform.py | 98 +
vmtkScripts/vmtksurfacetransforminteractive.py | 197 +
vmtkScripts/vmtksurfacetransformtoras.py | 68 +
vmtkScripts/vmtksurfacetriangle.py | 62 +
vmtkScripts/vmtksurfaceviewer.py | 362 +
vmtkScripts/vmtksurfacewriter.py | 244 +
vmtkScripts/vmtksurfmesh.py | 59 +
vmtkScripts/vmtktetgen.py | 160 +
vmtkScripts/vmtktetringenerator.py | 687 +
vmtk_env.sh.in | 8 +
vmtk_startup.bat.in | 11 +
vtkVmtk/CMakeLists.txt | 111 +
vtkVmtk/CMakeOptions.cmake | 137 +
vtkVmtk/Common/CMakeLists.txt | 27 +
vtkVmtk/Common/vtkvmtkConstants.h | 66 +
vtkVmtk/Common/vtkvmtkMath.cxx | 232 +
vtkVmtk/Common/vtkvmtkMath.h | 84 +
vtkVmtk/Common/vtkvmtkWin32Header.h | 177 +
vtkVmtk/ComputationalGeometry/CMakeLists.txt | 88 +
.../ComputationalGeometry/vtkvmtkAppendFilter.cxx | 282 +
.../ComputationalGeometry/vtkvmtkAppendFilter.h | 77 +
.../vtkvmtkBoundaryReferenceSystems.cxx | 382 +
.../vtkvmtkBoundaryReferenceSystems.h | 86 +
.../ComputationalGeometry/vtkvmtkCapPolyData.cxx | 220 +
vtkVmtk/ComputationalGeometry/vtkvmtkCapPolyData.h | 87 +
.../vtkvmtkCenterlineAttributesFilter.cxx | 271 +
.../vtkvmtkCenterlineAttributesFilter.h | 65 +
...tkvmtkCenterlineBifurcationReferenceSystems.cxx | 479 +
.../vtkvmtkCenterlineBifurcationReferenceSystems.h | 79 +
.../vtkvmtkCenterlineBifurcationVectors.cxx | 690 +
.../vtkvmtkCenterlineBifurcationVectors.h | 144 +
.../vtkvmtkCenterlineBranchExtractor.cxx | 363 +
.../vtkvmtkCenterlineBranchExtractor.h | 52 +
.../vtkvmtkCenterlineBranchGeometry.cxx | 587 +
.../vtkvmtkCenterlineBranchGeometry.h | 123 +
.../vtkvmtkCenterlineEndpointExtractor.cxx | 138 +
.../vtkvmtkCenterlineEndpointExtractor.h | 80 +
.../vtkvmtkCenterlineGeometry.cxx | 607 +
.../vtkvmtkCenterlineGeometry.h | 105 +
...tkCenterlineReferenceSystemAttributesOffset.cxx | 410 +
...vmtkCenterlineReferenceSystemAttributesOffset.h | 100 +
.../vtkvmtkCenterlineSmoothing.cxx | 117 +
.../vtkvmtkCenterlineSmoothing.h | 64 +
.../vtkvmtkCenterlineSphereDistance.cxx | 262 +
.../vtkvmtkCenterlineSphereDistance.h | 54 +
.../vtkvmtkCenterlineSplitExtractor.cxx | 281 +
.../vtkvmtkCenterlineSplitExtractor.h | 85 +
...vtkvmtkCenterlineSplittingAndGroupingFilter.cxx | 821 +
.../vtkvmtkCenterlineSplittingAndGroupingFilter.h | 107 +
.../vtkvmtkCenterlineUtilities.cxx | 395 +
.../vtkvmtkCenterlineUtilities.h | 91 +
.../vtkvmtkInternalTetrahedraExtractor.cxx | 332 +
.../vtkvmtkInternalTetrahedraExtractor.h | 99 +
.../vtkvmtkMergeCenterlines.cxx | 450 +
.../vtkvmtkMergeCenterlines.h | 82 +
vtkVmtk/ComputationalGeometry/vtkvmtkMinHeap.cxx | 345 +
vtkVmtk/ComputationalGeometry/vtkvmtkMinHeap.h | 101 +
.../vtkvmtkNonManifoldFastMarching.cxx | 773 +
.../vtkvmtkNonManifoldFastMarching.h | 186 +
.../vtkvmtkNonManifoldSteepestDescent.cxx | 251 +
.../vtkvmtkNonManifoldSteepestDescent.h | 82 +
vtkVmtk/ComputationalGeometry/vtkvmtkPolyBall.cxx | 112 +
vtkVmtk/ComputationalGeometry/vtkvmtkPolyBall.h | 80 +
.../ComputationalGeometry/vtkvmtkPolyBallLine.cxx | 253 +
.../ComputationalGeometry/vtkvmtkPolyBallLine.h | 110 +
.../vtkvmtkPolyBallModeller.cxx | 333 +
.../vtkvmtkPolyBallModeller.h | 92 +
.../vtkvmtkPolyDataBifurcationProfiles.cxx | 427 +
.../vtkvmtkPolyDataBifurcationProfiles.h | 97 +
.../vtkvmtkPolyDataBifurcationSections.cxx | 631 +
.../vtkvmtkPolyDataBifurcationSections.h | 134 +
.../vtkvmtkPolyDataBoundaryExtractor.cxx | 219 +
.../vtkvmtkPolyDataBoundaryExtractor.h | 51 +
.../vtkvmtkPolyDataBranchSections.cxx | 923 +
.../vtkvmtkPolyDataBranchSections.h | 128 +
.../vtkvmtkPolyDataBranchUtilities.cxx | 126 +
.../vtkvmtkPolyDataBranchUtilities.h | 53 +
...kvmtkPolyDataCenterlineAbscissaMetricFilter.cxx | 148 +
...vtkvmtkPolyDataCenterlineAbscissaMetricFilter.h | 57 +
...tkvmtkPolyDataCenterlineAngularMetricFilter.cxx | 233 +
.../vtkvmtkPolyDataCenterlineAngularMetricFilter.h | 57 +
.../vtkvmtkPolyDataCenterlineGroupsClipper.cxx | 377 +
.../vtkvmtkPolyDataCenterlineGroupsClipper.h | 109 +
.../vtkvmtkPolyDataCenterlineMetricFilter.cxx | 240 +
.../vtkvmtkPolyDataCenterlineMetricFilter.h | 102 +
.../vtkvmtkPolyDataCenterlineProjection.cxx | 140 +
.../vtkvmtkPolyDataCenterlineProjection.h | 68 +
.../vtkvmtkPolyDataCenterlineSections.cxx | 337 +
.../vtkvmtkPolyDataCenterlineSections.h | 80 +
.../vtkvmtkPolyDataCenterlines.cxx | 678 +
.../vtkvmtkPolyDataCenterlines.h | 152 +
.../vtkvmtkPolyDataDistanceToCenterlines.cxx | 194 +
.../vtkvmtkPolyDataDistanceToCenterlines.h | 87 +
.../vtkvmtkPolyDataFlowExtensionsFilter.cxx | 590 +
.../vtkvmtkPolyDataFlowExtensionsFilter.h | 139 +
.../vtkvmtkPolyDataLineEmbedder.cxx | 595 +
.../vtkvmtkPolyDataLineEmbedder.h | 78 +
.../vtkvmtkPolyDataLocalGeometry.cxx | 586 +
.../vtkvmtkPolyDataLocalGeometry.h | 205 +
.../vtkvmtkPolyDataPatchingFilter.cxx | 712 +
.../vtkvmtkPolyDataPatchingFilter.h | 111 +
...PolyDataReferenceSystemBoundaryMetricFilter.cxx | 489 +
...tkPolyDataReferenceSystemBoundaryMetricFilter.h | 99 +
.../vtkvmtkPolyDataScissors.cxx | 398 +
.../vtkvmtkPolyDataScissors.h | 63 +
.../vtkvmtkPolyDataStretchMappingFilter.cxx | 423 +
.../vtkvmtkPolyDataStretchMappingFilter.h | 84 +
.../vtkvmtkReferenceSystemUtilities.cxx | 46 +
.../vtkvmtkReferenceSystemUtilities.h | 51 +
.../vtkvmtkSimplifyVoronoiDiagram.cxx | 332 +
.../vtkvmtkSimplifyVoronoiDiagram.h | 94 +
.../vtkvmtkSteepestDescentLineTracer.cxx | 451 +
.../vtkvmtkSteepestDescentLineTracer.h | 148 +
.../vtkvmtkSteepestDescentShooter.cxx | 332 +
.../vtkvmtkSteepestDescentShooter.h | 95 +
...vmtkUnstructuredGridCenterlineGroupsClipper.cxx | 379 +
...tkvmtkUnstructuredGridCenterlineGroupsClipper.h | 109 +
.../vtkvmtkUnstructuredGridCenterlineSections.cxx | 624 +
.../vtkvmtkUnstructuredGridCenterlineSections.h | 119 +
.../vtkvmtkVoronoiDiagram3D.cxx | 314 +
.../vtkvmtkVoronoiDiagram3D.h | 78 +
vtkVmtk/Contrib/CMakeLists.txt | 56 +
vtkVmtk/Contrib/vtkvmtkBoundaryLayerGenerator2.cxx | 554 +
vtkVmtk/Contrib/vtkvmtkBoundaryLayerGenerator2.h | 116 +
vtkVmtk/Contrib/vtkvmtkCellDimensionFilter.cxx | 133 +
vtkVmtk/Contrib/vtkvmtkCellDimensionFilter.h | 80 +
.../Contrib/vtkvmtkCenterlineInterpolateArray.cxx | 264 +
.../Contrib/vtkvmtkCenterlineInterpolateArray.h | 84 +
.../Contrib/vtkvmtkConcaveAnnularCapPolyData.cxx | 453 +
vtkVmtk/Contrib/vtkvmtkConcaveAnnularCapPolyData.h | 70 +
vtkVmtk/Contrib/vtkvmtkDolfinWriter2.cxx | 398 +
vtkVmtk/Contrib/vtkvmtkDolfinWriter2.h | 81 +
vtkVmtk/Contrib/vtkvmtkPolyBallLine2.cxx | 309 +
vtkVmtk/Contrib/vtkvmtkPolyBallLine2.h | 132 +
.../vtkvmtkPolyDataDijkstraDistanceToPoints.cxx | 162 +
.../vtkvmtkPolyDataDijkstraDistanceToPoints.h | 84 +
.../Contrib/vtkvmtkPolyDataDistanceToSpheres.cxx | 144 +
vtkVmtk/Contrib/vtkvmtkPolyDataDistanceToSpheres.h | 84 +
.../vtkvmtkPolyDataGeodesicRBFInterpolation.cxx | 278 +
.../vtkvmtkPolyDataGeodesicRBFInterpolation.h | 94 +
vtkVmtk/Contrib/vtkvmtkPolyDataSampleFunction.cxx | 117 +
vtkVmtk/Contrib/vtkvmtkPolyDataSampleFunction.h | 69 +
vtkVmtk/Contrib/vtkvmtkRBFInterpolation2.cxx | 213 +
vtkVmtk/Contrib/vtkvmtkRBFInterpolation2.h | 101 +
vtkVmtk/Contrib/vtkvmtkSurfaceProjectCellArray.cxx | 179 +
vtkVmtk/Contrib/vtkvmtkSurfaceProjectCellArray.h | 85 +
vtkVmtk/Contrib/vtkvmtkcontrib.py | 12 +
vtkVmtk/DifferentialGeometry/CMakeLists.txt | 99 +
.../vtkvmtkBoundaryConditions.cxx | 83 +
.../vtkvmtkBoundaryConditions.h | 67 +
.../DifferentialGeometry/vtkvmtkDataSetItem.cxx | 48 +
vtkVmtk/DifferentialGeometry/vtkvmtkDataSetItem.h | 75 +
.../DifferentialGeometry/vtkvmtkDataSetItems.cxx | 63 +
vtkVmtk/DifferentialGeometry/vtkvmtkDataSetItems.h | 67 +
.../vtkvmtkDirichletBoundaryConditions.cxx | 86 +
.../vtkvmtkDirichletBoundaryConditions.h | 53 +
.../DifferentialGeometry/vtkvmtkDoubleVector.cxx | 256 +
vtkVmtk/DifferentialGeometry/vtkvmtkDoubleVector.h | 98 +
.../vtkvmtkEllipticProblem.cxx | 34 +
.../DifferentialGeometry/vtkvmtkEllipticProblem.h | 52 +
.../vtkvmtkEmptyNeighborhood.cxx | 39 +
.../vtkvmtkEmptyNeighborhood.h | 56 +
.../DifferentialGeometry/vtkvmtkEmptyStencil.cxx | 54 +
vtkVmtk/DifferentialGeometry/vtkvmtkEmptyStencil.h | 56 +
.../DifferentialGeometry/vtkvmtkFEAssembler.cxx | 99 +
vtkVmtk/DifferentialGeometry/vtkvmtkFEAssembler.h | 81 +
.../vtkvmtkFEShapeFunctions.cxx | 446 +
.../DifferentialGeometry/vtkvmtkFEShapeFunctions.h | 80 +
.../vtkvmtkGaussQuadrature.cxx | 2800 ++
.../DifferentialGeometry/vtkvmtkGaussQuadrature.h | 107 +
vtkVmtk/DifferentialGeometry/vtkvmtkItem.cxx | 34 +
vtkVmtk/DifferentialGeometry/vtkvmtkItem.h | 55 +
vtkVmtk/DifferentialGeometry/vtkvmtkItems.cxx | 160 +
vtkVmtk/DifferentialGeometry/vtkvmtkItems.h | 99 +
.../DifferentialGeometry/vtkvmtkLinearSystem.cxx | 84 +
vtkVmtk/DifferentialGeometry/vtkvmtkLinearSystem.h | 65 +
.../vtkvmtkLinearSystemSolver.cxx | 63 +
.../vtkvmtkLinearSystemSolver.h | 67 +
.../DifferentialGeometry/vtkvmtkNeighborhood.cxx | 86 +
vtkVmtk/DifferentialGeometry/vtkvmtkNeighborhood.h | 70 +
.../DifferentialGeometry/vtkvmtkNeighborhoods.cxx | 68 +
.../DifferentialGeometry/vtkvmtkNeighborhoods.h | 75 +
.../vtkvmtkOpenNLLinearSystemSolver.cxx | 119 +
.../vtkvmtkOpenNLLinearSystemSolver.h | 93 +
.../vtkvmtkPolyDataAreaWeightedUmbrellaStencil.cxx | 109 +
.../vtkvmtkPolyDataAreaWeightedUmbrellaStencil.h | 57 +
.../vtkvmtkPolyDataClampedSmoothingFilter.cxx | 299 +
.../vtkvmtkPolyDataClampedSmoothingFilter.h | 93 +
...tkvmtkPolyDataCylinderHarmonicMappingFilter.cxx | 106 +
.../vtkvmtkPolyDataCylinderHarmonicMappingFilter.h | 49 +
.../vtkvmtkPolyDataDiscreteElasticaFilter.cxx | 577 +
.../vtkvmtkPolyDataDiscreteElasticaFilter.h | 52 +
.../vtkvmtkPolyDataFEGradientAssembler.cxx | 136 +
.../vtkvmtkPolyDataFEGradientAssembler.h | 58 +
.../vtkvmtkPolyDataFELaplaceAssembler.cxx | 93 +
.../vtkvmtkPolyDataFELaplaceAssembler.h | 49 +
.../vtkvmtkPolyDataFELaplaceBeltramiStencil.cxx | 40 +
.../vtkvmtkPolyDataFELaplaceBeltramiStencil.h | 54 +
.../vtkvmtkPolyDataFVFELaplaceBeltramiStencil.cxx | 74 +
.../vtkvmtkPolyDataFVFELaplaceBeltramiStencil.h | 56 +
.../vtkvmtkPolyDataGradientFilter.cxx | 155 +
.../vtkvmtkPolyDataGradientFilter.h | 66 +
.../vtkvmtkPolyDataGradientStencil.cxx | 136 +
.../vtkvmtkPolyDataGradientStencil.h | 58 +
.../vtkvmtkPolyDataHarmonicMappingFilter.cxx | 184 +
.../vtkvmtkPolyDataHarmonicMappingFilter.h | 91 +
.../vtkvmtkPolyDataLaplaceBeltramiStencil.cxx | 142 +
.../vtkvmtkPolyDataLaplaceBeltramiStencil.h | 52 +
...vtkvmtkPolyDataManifoldExtendedNeighborhood.cxx | 121 +
.../vtkvmtkPolyDataManifoldExtendedNeighborhood.h | 58 +
.../vtkvmtkPolyDataManifoldNeighborhood.cxx | 177 +
.../vtkvmtkPolyDataManifoldNeighborhood.h | 58 +
.../vtkvmtkPolyDataManifoldStencil.cxx | 146 +
.../vtkvmtkPolyDataManifoldStencil.h | 70 +
.../vtkvmtkPolyDataMeanCurvature.cxx | 195 +
.../vtkvmtkPolyDataMeanCurvature.h | 89 +
...lyDataMultipleCylinderHarmonicMappingFilter.cxx | 149 +
...PolyDataMultipleCylinderHarmonicMappingFilter.h | 59 +
.../vtkvmtkPolyDataNeighborhood.cxx | 89 +
.../vtkvmtkPolyDataNeighborhood.h | 57 +
.../vtkvmtkPolyDataRigidSurfaceModelling.cxx | 52 +
.../vtkvmtkPolyDataRigidSurfaceModelling.h | 52 +
.../vtkvmtkPolyDataStencilFlowFilter.cxx | 190 +
.../vtkvmtkPolyDataStencilFlowFilter.h | 94 +
.../vtkvmtkPolyDataSurfaceRemeshing.cxx | 1894 +
.../vtkvmtkPolyDataSurfaceRemeshing.h | 218 +
.../vtkvmtkPolyDataUmbrellaStencil.cxx | 45 +
.../vtkvmtkPolyDataUmbrellaStencil.h | 56 +
.../DifferentialGeometry/vtkvmtkSparseMatrix.cxx | 332 +
vtkVmtk/DifferentialGeometry/vtkvmtkSparseMatrix.h | 77 +
.../vtkvmtkSparseMatrixRow.cxx | 201 +
.../DifferentialGeometry/vtkvmtkSparseMatrixRow.h | 80 +
vtkVmtk/DifferentialGeometry/vtkvmtkStencil.cxx | 167 +
vtkVmtk/DifferentialGeometry/vtkvmtkStencil.h | 101 +
vtkVmtk/DifferentialGeometry/vtkvmtkStencils.cxx | 80 +
vtkVmtk/DifferentialGeometry/vtkvmtkStencils.h | 89 +
.../vtkvmtkUnstructuredGridFEGradientAssembler.cxx | 232 +
.../vtkvmtkUnstructuredGridFEGradientAssembler.h | 80 +
.../vtkvmtkUnstructuredGridFELaplaceAssembler.cxx | 93 +
.../vtkvmtkUnstructuredGridFELaplaceAssembler.h | 49 +
...vtkvmtkUnstructuredGridFEVorticityAssembler.cxx | 159 +
.../vtkvmtkUnstructuredGridFEVorticityAssembler.h | 58 +
.../vtkvmtkUnstructuredGridGradientFilter.cxx | 206 +
.../vtkvmtkUnstructuredGridGradientFilter.h | 71 +
...tkvmtkUnstructuredGridHarmonicMappingFilter.cxx | 160 +
.../vtkvmtkUnstructuredGridHarmonicMappingFilter.h | 74 +
.../vtkvmtkUnstructuredGridNeighborhood.cxx | 93 +
.../vtkvmtkUnstructuredGridNeighborhood.h | 57 +
.../vtkvmtkUnstructuredGridVorticityFilter.cxx | 205 +
.../vtkvmtkUnstructuredGridVorticityFilter.h | 75 +
vtkVmtk/IO/CMakeLists.txt | 58 +
vtkVmtk/IO/vtkvmtkDICOMImageReader.cxx | 341 +
vtkVmtk/IO/vtkvmtkDICOMImageReader.h | 68 +
vtkVmtk/IO/vtkvmtkDolfinWriter.cxx | 314 +
vtkVmtk/IO/vtkvmtkDolfinWriter.h | 68 +
vtkVmtk/IO/vtkvmtkFDNEUTReader.cxx | 491 +
vtkVmtk/IO/vtkvmtkFDNEUTReader.h | 85 +
vtkVmtk/IO/vtkvmtkFDNEUTWriter.cxx | 410 +
vtkVmtk/IO/vtkvmtkFDNEUTWriter.h | 68 +
vtkVmtk/IO/vtkvmtkFluentWriter.cxx | 333 +
vtkVmtk/IO/vtkvmtkFluentWriter.h | 62 +
vtkVmtk/IO/vtkvmtkPNGWriter.cxx | 260 +
vtkVmtk/IO/vtkvmtkPNGWriter.h | 66 +
vtkVmtk/IO/vtkvmtkTetGenReader.cxx | 297 +
vtkVmtk/IO/vtkvmtkTetGenReader.h | 64 +
vtkVmtk/IO/vtkvmtkTetGenWriter.cxx | 204 +
vtkVmtk/IO/vtkvmtkTetGenWriter.h | 62 +
vtkVmtk/IO/vtkvmtkXdaReader.cxx | 76 +
vtkVmtk/IO/vtkvmtkXdaReader.h | 62 +
vtkVmtk/IO/vtkvmtkXdaWriter.cxx | 580 +
vtkVmtk/IO/vtkvmtkXdaWriter.h | 63 +
vtkVmtk/Misc/CMakeLists.txt | 80 +
vtkVmtk/Misc/vtkvmtkAnnularCapPolyData.cxx | 367 +
vtkVmtk/Misc/vtkvmtkAnnularCapPolyData.h | 65 +
vtkVmtk/Misc/vtkvmtkBoundaryLayerGenerator.cxx | 949 +
vtkVmtk/Misc/vtkvmtkBoundaryLayerGenerator.h | 161 +
vtkVmtk/Misc/vtkvmtkCurvedMPRImageFilter.cxx | 437 +
vtkVmtk/Misc/vtkvmtkCurvedMPRImageFilter.h | 116 +
vtkVmtk/Misc/vtkvmtkImageBoxPainter.cxx | 143 +
vtkVmtk/Misc/vtkvmtkImageBoxPainter.h | 85 +
.../Misc/vtkvmtkIterativeClosestPointTransform.cxx | 279 +
.../Misc/vtkvmtkIterativeClosestPointTransform.h | 72 +
vtkVmtk/Misc/vtkvmtkLevelSetSigmoidFilter.cxx | 111 +
vtkVmtk/Misc/vtkvmtkLevelSetSigmoidFilter.h | 70 +
.../Misc/vtkvmtkLinearToQuadraticMeshFilter.cxx | 1843 +
vtkVmtk/Misc/vtkvmtkLinearToQuadraticMeshFilter.h | 99 +
.../vtkvmtkLinearToQuadraticSurfaceMeshFilter.cxx | 162 +
.../vtkvmtkLinearToQuadraticSurfaceMeshFilter.h | 67 +
vtkVmtk/Misc/vtkvmtkLinearizeMeshFilter.cxx | 229 +
vtkVmtk/Misc/vtkvmtkLinearizeMeshFilter.h | 56 +
vtkVmtk/Misc/vtkvmtkMeshLambda2.cxx | 188 +
vtkVmtk/Misc/vtkvmtkMeshLambda2.h | 79 +
vtkVmtk/Misc/vtkvmtkMeshProjection.cxx | 117 +
vtkVmtk/Misc/vtkvmtkMeshProjection.h | 60 +
vtkVmtk/Misc/vtkvmtkMeshVelocityStatistics.cxx | 166 +
vtkVmtk/Misc/vtkvmtkMeshVelocityStatistics.h | 58 +
vtkVmtk/Misc/vtkvmtkMeshVorticity.cxx | 143 +
vtkVmtk/Misc/vtkvmtkMeshVorticity.h | 75 +
vtkVmtk/Misc/vtkvmtkMeshWallShearRate.cxx | 179 +
vtkVmtk/Misc/vtkvmtkMeshWallShearRate.h | 75 +
vtkVmtk/Misc/vtkvmtkPolyDataBoundaryExtractor.cxx | 180 +
vtkVmtk/Misc/vtkvmtkPolyDataBoundaryExtractor.h | 50 +
vtkVmtk/Misc/vtkvmtkPolyDataKiteRemovalFilter.cxx | 184 +
vtkVmtk/Misc/vtkvmtkPolyDataKiteRemovalFilter.h | 55 +
vtkVmtk/Misc/vtkvmtkPolyDataNetworkExtraction.cxx | 1989 ++
vtkVmtk/Misc/vtkvmtkPolyDataNetworkExtraction.h | 141 +
.../Misc/vtkvmtkPolyDataNormalPlaneEstimator.cxx | 250 +
vtkVmtk/Misc/vtkvmtkPolyDataNormalPlaneEstimator.h | 71 +
vtkVmtk/Misc/vtkvmtkPolyDataSizingFunction.cxx | 127 +
vtkVmtk/Misc/vtkvmtkPolyDataSizingFunction.h | 61 +
.../vtkvmtkPolyDataToUnstructuredGridFilter.cxx | 90 +
.../Misc/vtkvmtkPolyDataToUnstructuredGridFilter.h | 55 +
vtkVmtk/Misc/vtkvmtkRBFInterpolation.cxx | 203 +
vtkVmtk/Misc/vtkvmtkRBFInterpolation.h | 97 +
vtkVmtk/Misc/vtkvmtkSimpleCapPolyData.cxx | 171 +
vtkVmtk/Misc/vtkvmtkSimpleCapPolyData.h | 64 +
vtkVmtk/Misc/vtkvmtkSmoothCapPolyData.cxx | 296 +
vtkVmtk/Misc/vtkvmtkSmoothCapPolyData.h | 73 +
...vmtkStaticTemporalInterpolatedVelocityField.cxx | 456 +
...tkvmtkStaticTemporalInterpolatedVelocityField.h | 170 +
vtkVmtk/Misc/vtkvmtkStaticTemporalStreamTracer.cxx | 811 +
vtkVmtk/Misc/vtkvmtkStaticTemporalStreamTracer.h | 140 +
vtkVmtk/Misc/vtkvmtkStreamlineClusteringFilter.cxx | 267 +
vtkVmtk/Misc/vtkvmtkStreamlineClusteringFilter.h | 55 +
.../vtkvmtkStreamlineOsculatingCentersFilter.cxx | 239 +
.../vtkvmtkStreamlineOsculatingCentersFilter.h | 63 +
.../Misc/vtkvmtkStreamlineToParticlesFilter.cxx | 230 +
vtkVmtk/Misc/vtkvmtkStreamlineToParticlesFilter.h | 89 +
vtkVmtk/Misc/vtkvmtkSurfMeshWrapper.cxx | 146 +
vtkVmtk/Misc/vtkvmtkSurfMeshWrapper.h | 54 +
vtkVmtk/Misc/vtkvmtkSurfaceDistance.cxx | 239 +
vtkVmtk/Misc/vtkvmtkSurfaceDistance.h | 78 +
vtkVmtk/Misc/vtkvmtkSurfaceProjection.cxx | 130 +
vtkVmtk/Misc/vtkvmtkSurfaceProjection.h | 60 +
vtkVmtk/Misc/vtkvmtkTetGenWrapper.cxx | 593 +
vtkVmtk/Misc/vtkvmtkTetGenWrapper.h | 177 +
vtkVmtk/Misc/vtkvmtkTopologicalSeamFilter.cxx | 274 +
vtkVmtk/Misc/vtkvmtkTopologicalSeamFilter.h | 64 +
.../Misc/vtkvmtkUnstructuredGridTetraFilter.cxx | 288 +
vtkVmtk/Misc/vtkvmtkUnstructuredGridTetraFilter.h | 65 +
vtkVmtk/Rendering/CMakeLists.txt | 51 +
vtkVmtk/Rendering/vtkvmtkImagePlaneWidget.cxx | 111 +
vtkVmtk/Rendering/vtkvmtkImagePlaneWidget.h | 54 +
.../vtkvmtkInteractorStyleTrackballCamera.cxx | 30 +
.../vtkvmtkInteractorStyleTrackballCamera.h | 51 +
vtkVmtk/Segmentation/CMakeLists.txt | 96 +
...AnisotropicDiffusionVesselEnhancementFunction.h | 185 +
...isotropicDiffusionVesselEnhancementFunction.txx | 203 +
...sotropicDiffusionVesselEnhancementImageFilter.h | 274 +
...tropicDiffusionVesselEnhancementImageFilter.txx | 648 +
vtkVmtk/Segmentation/itkFWHMFeatureImageFilter.h | 128 +
vtkVmtk/Segmentation/itkFWHMFeatureImageFilter.txx | 115 +
.../itkFastMarchingDirectionalFreezeImageFilter.h | 129 +
...itkFastMarchingDirectionalFreezeImageFilter.txx | 238 +
.../itkFastMarchingUpwindGradientImageFilter.h | 233 +
.../itkFastMarchingUpwindGradientImageFilter.txx | 329 +
...ssianSmoothed3DToVesselnessMeasureImageFilter.h | 150 +
...ianSmoothed3DToVesselnessMeasureImageFilter.txx | 204 +
.../itkSymmetricEigenVectorAnalysisImageFilter.h | 171 +
.../itkUpwindGradientMagnitudeImageFilter.h | 151 +
.../itkUpwindGradientMagnitudeImageFilter.txx | 236 +
.../itkVesselEnhancingDiffusion3DImageFilter.h | 194 +
.../itkVesselEnhancingDiffusion3DImageFilter.txx | 746 +
vtkVmtk/Segmentation/vtkvmtkActiveTubeFilter.cxx | 558 +
vtkVmtk/Segmentation/vtkvmtkActiveTubeFilter.h | 143 +
.../vtkvmtkBoundedReciprocalImageFilter.cxx | 49 +
.../vtkvmtkBoundedReciprocalImageFilter.h | 67 +
vtkVmtk/Segmentation/vtkvmtkCardinalSpline.cxx | 182 +
vtkVmtk/Segmentation/vtkvmtkCardinalSpline.h | 61 +
.../vtkvmtkCollidingFrontsImageFilter.cxx | 114 +
.../vtkvmtkCollidingFrontsImageFilter.h | 80 +
.../vtkvmtkConstrainedLaplacianPolyDataFilter.cxx | 209 +
.../vtkvmtkConstrainedLaplacianPolyDataFilter.h | 80 +
.../vtkvmtkCurvesLevelSetImageFilter.cxx | 114 +
.../vtkvmtkCurvesLevelSetImageFilter.h | 125 +
.../vtkvmtkDanielssonDistanceMapImageFilter.cxx | 59 +
.../vtkvmtkDanielssonDistanceMapImageFilter.h | 70 +
.../Segmentation/vtkvmtkFWHMFeatureImageFilter.cxx | 77 +
.../Segmentation/vtkvmtkFWHMFeatureImageFilter.h | 68 +
...mtkFastMarchingDirectionalFreezeImageFilter.cxx | 117 +
...kvmtkFastMarchingDirectionalFreezeImageFilter.h | 97 +
...tkvmtkFastMarchingUpwindGradientImageFilter.cxx | 117 +
.../vtkvmtkFastMarchingUpwindGradientImageFilter.h | 103 +
...kGeodesicActiveContourLevelSet2DImageFilter.cxx | 111 +
...mtkGeodesicActiveContourLevelSet2DImageFilter.h | 123 +
...mtkGeodesicActiveContourLevelSetImageFilter.cxx | 114 +
...kvmtkGeodesicActiveContourLevelSetImageFilter.h | 120 +
.../vtkvmtkGradientMagnitudeImageFilter.cxx | 50 +
.../vtkvmtkGradientMagnitudeImageFilter.h | 58 +
...ientMagnitudeRecursiveGaussian2DImageFilter.cxx | 59 +
...adientMagnitudeRecursiveGaussian2DImageFilter.h | 65 +
...adientMagnitudeRecursiveGaussianImageFilter.cxx | 59 +
...GradientMagnitudeRecursiveGaussianImageFilter.h | 65 +
.../vtkvmtkGrayscaleMorphologyImageFilter.cxx | 155 +
.../vtkvmtkGrayscaleMorphologyImageFilter.h | 84 +
vtkVmtk/Segmentation/vtkvmtkITKFilterUtilities.h | 261 +
...mtkLaplacianSegmentationLevelSetImageFilter.cxx | 111 +
...kvmtkLaplacianSegmentationLevelSetImageFilter.h | 119 +
.../Segmentation/vtkvmtkNormalizeImageFilter.cxx | 65 +
vtkVmtk/Segmentation/vtkvmtkNormalizeImageFilter.h | 57 +
.../vtkvmtkObjectnessMeasureImageFilter.cxx | 112 +
.../vtkvmtkObjectnessMeasureImageFilter.h | 113 +
.../vtkvmtkOtsuMultipleThresholdsImageFilter.cxx | 110 +
.../vtkvmtkOtsuMultipleThresholdsImageFilter.h | 74 +
.../Segmentation/vtkvmtkPolyDataPotentialFit.cxx | 648 +
vtkVmtk/Segmentation/vtkvmtkPolyDataPotentialFit.h | 173 +
.../vtkvmtkRecursiveGaussian2DImageFilter.cxx | 63 +
.../vtkvmtkRecursiveGaussian2DImageFilter.h | 65 +
.../vtkvmtkRecursiveGaussianImageFilter.cxx | 63 +
.../vtkvmtkRecursiveGaussianImageFilter.h | 65 +
.../vtkvmtkSatoVesselnessMeasureImageFilter.cxx | 89 +
.../vtkvmtkSatoVesselnessMeasureImageFilter.h | 98 +
vtkVmtk/Segmentation/vtkvmtkSigmoidImageFilter.cxx | 64 +
vtkVmtk/Segmentation/vtkvmtkSigmoidImageFilter.h | 76 +
...mtkThresholdSegmentationLevelSetImageFilter.cxx | 121 +
...kvmtkThresholdSegmentationLevelSetImageFilter.h | 143 +
.../vtkvmtkUpwindGradientMagnitudeImageFilter.cxx | 62 +
.../vtkvmtkUpwindGradientMagnitudeImageFilter.h | 64 +
...tkvmtkVesselEnhancingDiffusion3DImageFilter.cxx | 32 +
.../vtkvmtkVesselEnhancingDiffusion3DImageFilter.h | 210 +
.../vtkvmtkVesselEnhancingDiffusionImageFilter.cxx | 99 +
.../vtkvmtkVesselEnhancingDiffusionImageFilter.h | 129 +
.../vtkvmtkVesselnessMeasureImageFilter.cxx | 111 +
.../vtkvmtkVesselnessMeasureImageFilter.h | 109 +
vtkVmtk/Utilities/CMakeLists.txt | 11 +
vtkVmtk/Utilities/Doxygen/CMakeLists.txt | 35 +
vtkVmtk/Utilities/Doxygen/doc_cleanhtml.pl | 113 +
vtkVmtk/Utilities/Doxygen/doc_header2doxygen.pl | 555 +
vtkVmtk/Utilities/Doxygen/doc_mainpage.dox | 10 +
vtkVmtk/Utilities/Doxygen/doc_makeall.sh.in | 38 +
vtkVmtk/Utilities/Doxygen/doc_rmpath.pl | 111 +
vtkVmtk/Utilities/Doxygen/doxyfile.in | 152 +
vtkVmtk/Utilities/Doxygen/doxygen.css | 1012 +
vtkVmtk/Utilities/OpenNL/CMakeLists.txt | 23 +
vtkVmtk/Utilities/OpenNL/nl.h | 277 +
vtkVmtk/Utilities/OpenNL/nl_single_file.c | 4360 +++
vtkVmtk/Utilities/Stellar_1.0/CMakeLists.txt | 27 +
vtkVmtk/Utilities/Stellar_1.0/EXAMPLE_CONFIG | 154 +
vtkVmtk/Utilities/Stellar_1.0/house2.ele | 1391 +
vtkVmtk/Utilities/Stellar_1.0/house2.node | 402 +
vtkVmtk/Utilities/Stellar_1.0/makefile | 76 +
vtkVmtk/Utilities/Stellar_1.0/meshconvert.py | 872 +
vtkVmtk/Utilities/Stellar_1.0/src/Starbase.c | 15261 ++++++++
vtkVmtk/Utilities/Stellar_1.0/src/Starbase.h | 512 +
vtkVmtk/Utilities/Stellar_1.0/src/Stellar.c | 19 +
vtkVmtk/Utilities/Stellar_1.0/src/anisotropy.c | 459 +
vtkVmtk/Utilities/Stellar_1.0/src/arraypoolstack.c | 959 +
vtkVmtk/Utilities/Stellar_1.0/src/classify.c | 481 +
vtkVmtk/Utilities/Stellar_1.0/src/improve.c | 670 +
vtkVmtk/Utilities/Stellar_1.0/src/insertion.c | 3239 ++
vtkVmtk/Utilities/Stellar_1.0/src/interact.c | 312 +
vtkVmtk/Utilities/Stellar_1.0/src/journal.c | 1087 +
vtkVmtk/Utilities/Stellar_1.0/src/main.c | 55 +
vtkVmtk/Utilities/Stellar_1.0/src/output.c | 652 +
vtkVmtk/Utilities/Stellar_1.0/src/print.c | 485 +
vtkVmtk/Utilities/Stellar_1.0/src/quadric.c | 590 +
vtkVmtk/Utilities/Stellar_1.0/src/quality.c | 2560 ++
vtkVmtk/Utilities/Stellar_1.0/src/showme.c | 7241 ++++
vtkVmtk/Utilities/Stellar_1.0/src/size.c | 801 +
vtkVmtk/Utilities/Stellar_1.0/src/smoothing.c | 2483 ++
vtkVmtk/Utilities/Stellar_1.0/src/top.c | 1413 +
vtkVmtk/Utilities/Stellar_1.0/src/topological.c | 3505 ++
vtkVmtk/Utilities/Stellar_1.0/src/vector.c | 110 +
vtkVmtk/Utilities/tetgen1.4.3/CMakeLists.txt | 16 +
vtkVmtk/Utilities/tetgen1.4.3/LICENSE | 66 +
vtkVmtk/Utilities/tetgen1.4.3/README | 16 +
vtkVmtk/Utilities/tetgen1.4.3/example.poly | 132 +
vtkVmtk/Utilities/tetgen1.4.3/makefile | 71 +
vtkVmtk/Utilities/tetgen1.4.3/predicates.cxx | 4187 +++
vtkVmtk/Utilities/tetgen1.4.3/tetgen.cxx | 34484 +++++++++++++++++++
vtkVmtk/Utilities/tetgen1.4.3/tetgen.h | 3377 ++
vtkVmtk/Utilities/vtkvmtkITK/CMakeLists.txt | 47 +
vtkVmtk/Utilities/vtkvmtkITK/vtkITKUtility.h | 116 +
vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITK.h | 22 +
.../vtkvmtkITKArchetypeImageSeriesReader.cxx | 1375 +
.../vtkvmtkITKArchetypeImageSeriesReader.h | 872 +
.../vtkvmtkITKArchetypeImageSeriesScalarReader.cxx | 232 +
.../vtkvmtkITKArchetypeImageSeriesScalarReader.h | 38 +
.../Utilities/vtkvmtkITK/vtkvmtkITKConfig.cmake.in | 6 +
.../Utilities/vtkvmtkITK/vtkvmtkITKConfigure.h.in | 20 +
.../Utilities/vtkvmtkITK/vtkvmtkITKImageWriter.cxx | 532 +
.../Utilities/vtkvmtkITK/vtkvmtkITKImageWriter.h | 87 +
vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKUtility.h | 131 +
.../Utilities/vtkvmtkITK/vtkvmtkITKWin32Header.h | 35 +
vtkVmtk/Wrapping/JavaDependencies.cmake.in | 5 +
vtkVmtk/Wrapping/hints | 0
vtkVmtk/Wrapping/vtkWrapperInit.data.in | 1 +
vtkVmtk/vmtkFunctions.cmake | 73 +
vtkVmtk/vtkMacroKitPythonWrap.cmake | 137 +
vtkVmtk/vtkvmtk.py | 21 +
vtkVmtk/vtkvmtkConfigure.h.in | 13 +
694 files changed, 206571 insertions(+), 116 deletions(-)
diff --cc debian/changelog
index 45e01e6,0000000..e3fbe85
mode 100644,000000..100644
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,120 -1,0 +1,125 @@@
- vmtk (1.2-1) UNRELEASED; urgency=medium
++vmtk (1.3-1) unstable; urgency=medium
+
- * Team upload
- * New upstream version
++ * Team upload.
++ * New upstream release (Closes: #801820)
++ * Bump std-version and compat level to 3.9.8 and 9.
++ * Build against itk4 and vtk6
++ * Fix watch file.
++ * Add libfftw3-dev dependency
++ * Fix copyright file
+
- -- Andreas Tille <tille at debian.org> Sat, 19 Dec 2015 07:30:34 +0100
++ -- Gianfranco Costamagna <locutusofborg at debian.org> Sat, 16 Apr 2016 23:09:46 +0200
+
+vmtk (1.0.1-3) unstable; urgency=low
+
+ * debian/control:
+ - Remove DM-Upload-Allowed field.
+ - Remove libgdcm2-dev from Build-Depends (closes: #731920).
+ - Use canonical URIs for Vcs-* fields.
+ - Bump Standards-Version to 3.9.4 (no changes needed).
+ - Replace python-support with dh-python.
+ - Bump minimum required cdbs package version to 0.4.90~.
+ - Bump minimum required python-dev package version to 2.6.6-3~.
+ - Remove all XB-Python-Version lines.
+ - Replace XS-Python-Version with X-Python-Version.
+ * debian/rules: Replace call on dh_pysupport with dh_python2.
+
+ -- Johannes Ring <johannr at simula.no> Wed, 11 Dec 2013 11:52:08 +0100
+
+vmtk (1.0.1-2) unstable; urgency=low
+
+ * Build tetgen with -O1 instead of -O0 to work around a build failure
+ on armhf. See LP: #1049614.
+ * debian/control:
+ - Use unversioned libtiff-dev instead of libtiff4-dev (closes: #682714).
+
+ -- Johannes Ring <johannr at simula.no> Thu, 01 Aug 2013 10:15:39 +0200
+
+vmtk (1.0.1-1) unstable; urgency=low
+
+ * New upstream release.
+ * debian/control: Replace libvmtk0.9 with libvmtk1.0.
+ * debian/rules:
+ - Update VTK_DIR to vtk 5.8 (closes: #676596).
+ - Turn on USE_SYSTEM_{VTK,ITK} since default is now to download these.
+ - Rename install/libvmtk0.9 target to install/libvtmk1.0.
+ * Remove patch (fixed upstream).
+ * Update lintian overrides.
+ * Switch to machine-readable format in debian/copyright.
+
+ -- Johannes Ring <johannr at simula.no> Fri, 08 Jun 2012 08:07:49 +0200
+
+vmtk (0.9.0-7) unstable; urgency=low
+
+ * debian/control:
+ - Replace libpng12-dev with libpng-dev in Build-Depends (closes: #662541).
+ - Add libvtkgdcm2-dev, libvtk5-qt4-dev and libvtk-java in Build-Depends.
+ - Bump Standards-Versions to 3.9.3 (no changes needed).
+ * debian/rules:
+ - Update GDCM_DIR to /usr/lib/gdcm-2.2.
+
+ -- Johannes Ring <johannr at simula.no> Wed, 21 Mar 2012 13:15:36 +0100
+
+vmtk (0.9.0-6) unstable; urgency=low
+
+ * Add patch to fix problem with Python.h not found (closes: 650586).
+
+ -- Johannes Ring <johannr at simula.no> Mon, 19 Dec 2011 11:18:55 +0100
+
+vmtk (0.9.0-5) unstable; urgency=low
+
+ * debian/rules: Enable contrib scripts.
+ * Add more lintian overrides.
+
+ -- Johannes Ring <johannr at simula.no> Mon, 05 Sep 2011 13:34:30 +0200
+
+vmtk (0.9.0-4) unstable; urgency=low
+
+ * Make package autobuildable:
+ - Set "XS-Autobuild: yes" in debian/control.
+ - Add note in debian/copyright.
+ * debian/control:
+ - Replace libjpeg62-dev with libjpeg-dev in Build-Depends.
+ - Bump Standards-Version to 3.9.2 (no changes needed).
+
+ -- Johannes Ring <johannr at simula.no> Tue, 19 Jul 2011 15:27:19 +0200
+
+vmtk (0.9.0-3) unstable; urgency=low
+
+ * Update/rebuild to use vtk 5.6 (closes: 621070):
+ - Set VTK_DIR to /usr/lib/vtk-5.6 in DEB_CMAKE_EXTRA_FLAGS in
+ debian/rules.
+ * debian/control:
+ - Remove old Conflicts, Replaces, and Provides fields for all binary
+ packages.
+ - Bump Standards-Version to 3.9.1 (no changes needed).
+
+ -- Johannes Ring <johannr at simula.no> Wed, 06 Apr 2011 20:31:24 +0200
+
+vmtk (0.9.0-2) unstable; urgency=low
+
+ * debian/rules:
+ - Enable building of contrib classes. Update lintian-overrides
+ accordingly.
+ - Minor fix for Python 2.7 for binary package python-vmtk.
+ * debian/control: Set XS-Python-Version to ">= 2.3" (closes: #606857).
+ * debian/copyright: Remove reference to deprecated BSD license file
+ and add full license text.
+
+ -- Johannes Ring <johannr at simula.no> Mon, 14 Feb 2011 13:54:35 +0100
+
+vmtk (0.9.0-1) unstable; urgency=low
+
+ * New upstream release.
+ * debian/control:
+ - Add DM-Upload-Allowed: yes.
+ - Bump XS-Python-Version field to 2.6.
+ * debian/rules: Use uscan in get-orig-source target.
+
+ -- Johannes Ring <johannr at simula.no> Fri, 06 Aug 2010 14:34:09 +0200
+
+vmtk (0.9~bzr276-1) unstable; urgency=low
+
+ * Initial release (Closes: #584222)
+
+ -- Johannes Ring <johannr at simula.no> Thu, 03 Jun 2010 19:11:14 +0200
diff --cc debian/compat
index 7f8f011,0000000..ec63514
mode 100644,000000..100644
--- a/debian/compat
+++ b/debian/compat
@@@ -1,1 -1,0 +1,1 @@@
- 7
++9
diff --cc debian/control
index 35cc1e7,0000000..b8b32d9
mode 100644,000000..100644
--- a/debian/control
+++ b/debian/control
@@@ -1,59 -1,0 +1,59 @@@
+Source: vmtk
+Homepage: http://www.vmtk.org
+Section: non-free/science
+Priority: optional
+Maintainer: Debian Science Team <debian-science-maintainers at lists.alioth.debian.org>
+Uploaders: Johannes Ring <johannr at simula.no>
- Build-Depends: cdbs (>= 0.4.90~), debhelper (>= 7), cmake,
- dh-python, python-dev (>= 2.6.6-3~), libvtk5-dev, python-vtk,
- libinsighttoolkit3-dev | libinsighttoolkit-dev, libjpeg-dev, libtiff-dev,
++Build-Depends: cdbs (>= 0.4.90~), debhelper (>= 9), cmake,
++ dh-python, python-dev (>= 2.6.6-3~), libvtk6-dev, python-vtk6,
++ libinsighttoolkit4-dev, libjpeg-dev, libtiff-dev,
+ libfreetype6-dev, libxext-dev, libpng-dev, libexpat1-dev, uuid-dev,
- libvtkgdcm2-dev, libopenjpeg-dev, libssl-dev, libvtk5-qt4-dev,
- libvtk-java
++ libvtkgdcm2-dev, libopenjpeg-dev, libssl-dev, libvtk6-qt-dev,
++ libvtk6-java, libfftw3-dev
+X-Python-Version: >= 2.3
- Standards-Version: 3.9.4
++Standards-Version: 3.9.8
+Vcs-Svn: svn://anonscm.debian.org/debian-science/packages/vmtk/trunk
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-science/packages/vmtk/trunk/
+XS-Autobuild: yes
+
+Package: libvmtk1.0
+Section: non-free/libs
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Suggests: libvmtk-dev
+Description: runtime libraries for vmtk
+ The Vascular Modeling Toolkit is a collection of libraries and tools for
+ 3D reconstruction, geometric analysis, mesh generation and surface data
+ analysis for image-based modeling of blood vessels.
+ .
+ This package contains the shared runtime libraries.
+
+Package: python-vmtk
+Section: non-free/python
+Architecture: any
+Depends: libvmtk1.0 (= ${binary:Version}), ${python:Depends}, ${shlibs:Depends}, ${misc:Depends}
+Description: Python interface for vmtk
+ The Vascular Modeling Toolkit is a collection of libraries and tools for
+ 3D reconstruction, geometric analysis, mesh generation and surface data
+ analysis for image-based modeling of blood vessels.
+ .
+ This package provides the Python interface for vmtk.
+
+Package: libvmtk-dev
+Section: non-free/libdevel
+Architecture: any
+Depends: libvmtk1.0 (= ${binary:Version}), ${misc:Depends}
+Description: shared links and header files for vmtk
+ The Vascular Modeling Toolkit is a collection of libraries and tools for
+ 3D reconstruction, geometric analysis, mesh generation and surface data
+ analysis for image-based modeling of blood vessels.
+ .
+ This package contains header files and shared library links.
+
+Package: vmtk
+Architecture: all
+Depends: python, python-tk, python-vmtk (>= ${source:Version}), ${misc:Depends}
+Description: the Vascular Modeling Toolkit
+ The Vascular Modeling Toolkit is a collection of libraries and tools for
+ 3D reconstruction, geometric analysis, mesh generation and surface data
+ analysis for image-based modeling of blood vessels.
diff --cc debian/copyright
index 6d8509e,0000000..b84bb8e
mode 100644,000000..100644
--- a/debian/copyright
+++ b/debian/copyright
@@@ -1,512 -1,0 +1,446 @@@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: vmtk
+Upstream-Contact: vmtk-users at lists.sourceforge.net
+Source: http://www.vmtk.org
+Disclaimer:
+ This package is not part of the main Debian GNU/Linux distribution,
+ but uploaded to the non-free section. This is because it includes
+ non-free software (Tetgen). However, the (Tetgen) license does not
+ forbid Debian from using autobuilders to create binary packages.
+
+Files: *
+Copyright: 2004-2012, Luca Antiga, David Steinman
- License: BSD (3-clause)
- Redistribution and use in source and binary forms, with or without
- modification, are permitted provided that the following conditions are
- met:
- .
- 1. Redistributions of source code must retain the above copyright
- notice, this list of conditions and the following disclaimer.
- .
- 2. Redistributions in binary form must reproduce the above copyright
- notice, this list of conditions and the following disclaimer in the
- documentation and/or other materials provided with the distribution.
- .
- 3. Neither the name of Orobix Srl, the Mario Negri Institute, of the
- University of Toronto, nor the names of its contributors may be used
- to endorse or promote products derived from this software without
- specific prior written permission.
- .
- THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
- "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
- LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
- A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
- OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
- SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
- LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
- DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
- THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
- (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
- OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
++License: BSD-3-clause
+
+Files: debian/*
+Copyright: 2008-2012, Johannes Ring <johannr at simula.no>
+License: GPL-2+
+ This program is free software; you can redistribute it
+ and/or modify it under the terms of the GNU General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later
+ version.
+ .
+ This program is distributed in the hope that it will be
+ useful, but WITHOUT ANY WARRANTY; without even the implied
+ warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the GNU General Public License for more
+ details.
+ .
+ You should have received a copy of the GNU General Public
+ License along with this package; if not, write to the Free
+ Software Foundation, Inc., 51 Franklin St, Fifth Floor,
+ Boston, MA 02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public
+ License version 2 can be found in the file
+ `/usr/share/common-licenses/GPL-2'.
+
+Files: vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITK.h
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKArchetypeImageSeriesReader.cxx
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKArchetypeImageSeriesReader.h
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKArchetypeImageSeriesScalarReader.cxx
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKArchetypeImageSeriesScalarReader.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilter.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilter2DFF.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterF2F.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterF3F3.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterFF.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterFUL.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterSS.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterULUL.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterUSUL.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterUSUS.h
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageWriter.cxx
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageWriter.h
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKUtility.h
+ vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKWin32Header.h
+Copyright: Brigham and Women's Hospital (BWH)
+Comment:
+ For more information, please see:
+ http://www.slicer.org
+ and
+ http://wiki.na-mic.org/Wiki/index.php/Slicer3
+ .
+ The 3D Slicer license below is a BSD style license, with extensions
+ to cover contributions and other issues specific to 3D Slicer.
- License: BSD style
++License: BSD-style-1.0
+ 3D Slicer Contribution and Software License Agreement ("Agreement")
+ Version 1.0 (December 20, 2005)
+ .
+ This Agreement covers contributions to and downloads from the 3D
+ Slicer project ("Slicer") maintained by The Brigham and Women's
+ Hospital, Inc. ("Brigham"). Part A of this Agreement applies to
+ contributions of software and/or data to Slicer (including making
+ revisions of or additions to code and/or data already in Slicer). Part
+ B of this Agreement applies to downloads of software and/or data from
+ Slicer. Part C of this Agreement applies to all transactions with
+ Slicer. If you distribute Software (as defined below) downloaded from
+ Slicer, all of the paragraphs of Part B of this Agreement must be
+ included with and apply to such Software.
+ .
+ Your contribution of software and/or data to Slicer (including prior
+ to the date of the first publication of this Agreement, each a
+ "Contribution") and/or downloading, copying, modifying, displaying,
+ distributing or use of any software and/or data from Slicer
+ (collectively, the "Software") constitutes acceptance of all of the
+ terms and conditions of this Agreement. If you do not agree to such
+ terms and conditions, you have no right to contribute your
+ Contribution, or to download, copy, modify, display, distribute or use
+ the Software.
+ .
+ PART A. CONTRIBUTION AGREEMENT - License to Brigham with Right to
+ Sublicense ("Contribution Agreement").
+ .
+ 1. As used in this Contribution Agreement, "you" means the individual
+ contributing the Contribution to Slicer and the institution or
+ entity which employs or is otherwise affiliated with such
+ individual in connection with such Contribution.
+ .
+ 2. This Contribution Agreement applies to all Contributions made to
+ Slicer, including without limitation Contributions made prior to
+ the date of first publication of this Agreement. If at any time you
+ make a Contribution to Slicer, you represent that (i) you are
+ legally authorized and entitled to make such Contribution and to
+ grant all licenses granted in this Contribution Agreement with
+ respect to such Contribution; (ii) if your Contribution includes
+ any patient data, all such data is de-identified in accordance with
+ U.S. confidentiality and security laws and requirements, including
+ but not limited to the Health Insurance Portability and
+ Accountability Act (HIPAA) and its regulations, and your disclosure
+ of such data for the purposes contemplated by this Agreement is
+ properly authorized and in compliance with all applicable laws and
+ regulations; and (iii) you have preserved in the Contribution all
+ applicable attributions, copyright notices and licenses for any
+ third party software or data included in the Contribution.
+ .
+ 3. Except for the licenses granted in this Agreement, you reserve all
+ right, title and interest in your Contribution.
+ .
+ 4. You hereby grant to Brigham, with the right to sublicense, a
+ perpetual, worldwide, non-exclusive, no charge, royalty-free,
+ irrevocable license to use, reproduce, make derivative works of,
+ display and distribute the Contribution. If your Contribution is
+ protected by patent, you hereby grant to Brigham, with the right to
+ sublicense, a perpetual, worldwide, non-exclusive, no-charge,
+ royalty-free, irrevocable license under your interest in patent
+ rights covering the Contribution, to make, have made, use, sell and
+ otherwise transfer your Contribution, alone or in combination with
+ any other code.
+ .
+ 5. You acknowledge and agree that Brigham may incorporate your
+ Contribution into Slicer and may make Slicer available to members
+ of the public on an open source basis under terms substantially in
+ accordance with the Software License set forth in Part B of this
+ Agreement. You further acknowledge and agree that Brigham shall
+ have no liability arising in connection with claims resulting from
+ your breach of any of the terms of this Agreement.
+ .
+ 6. YOU WARRANT THAT TO THE BEST OF YOUR KNOWLEDGE YOUR CONTRIBUTION
+ DOES NOT CONTAIN ANY CODE THAT REQURES OR PRESCRIBES AN "OPEN
+ SOURCE LICENSE" FOR DERIVATIVE WORKS (by way of non-limiting
+ example, the GNU General Public License or other so-called
+ "reciprocal" license that requires any derived work to be licensed
+ under the GNU General Public License or other "open source
+ license").
+ .
+ PART B. DOWNLOADING AGREEMENT - License from Brigham with Right to
+ Sublicense ("Software License").
+ .
+ 1. As used in this Software License, "you" means the individual
+ downloading and/or using, reproducing, modifying, displaying and/or
+ distributing the Software and the institution or entity which
+ employs or is otherwise affiliated with such individual in
+ connection therewith. The Brigham and Women?s Hospital,
+ Inc. ("Brigham") hereby grants you, with right to sublicense, with
+ respect to Brigham's rights in the software, and data, if any,
+ which is the subject of this Software License (collectively, the
+ "Software"), a royalty-free, non-exclusive license to use,
+ reproduce, make derivative works of, display and distribute the
+ Software, provided that:
+ .
+ (a) you accept and adhere to all of the terms and conditions of this
+ Software License;
+ .
+ (b) in connection with any copy of or sublicense of all or any portion
+ of the Software, all of the terms and conditions in this Software
+ License shall appear in and shall apply to such copy and such
+ sublicense, including without limitation all source and executable
+ forms and on any user documentation, prefaced with the following
+ words: "All or portions of this licensed product (such portions are
+ the "Software") have been obtained under license from The Brigham and
+ Women's Hospital, Inc. and are subject to the following terms and
+ conditions:"
+ .
+ (c) you preserve and maintain all applicable attributions, copyright
+ notices and licenses included in or applicable to the Software;
+ .
+ (d) modified versions of the Software must be clearly identified and
+ marked as such, and must not be misrepresented as being the original
+ Software; and
+ .
+ (e) you consider making, but are under no obligation to make, the
+ source code of any of your modifications to the Software freely
+ available to others on an open source basis.
+ .
+ 2. The license granted in this Software License includes without
+ limitation the right to (i) incorporate the Software into
+ proprietary programs (subject to any restrictions applicable to
+ such programs), (ii) add your own copyright statement to your
+ modifications of the Software, and (iii) provide additional or
+ different license terms and conditions in your sublicenses of
+ modifications of the Software; provided that in each case your use,
+ reproduction or distribution of such modifications otherwise
+ complies with the conditions stated in this Software License.
+ .
+ 3. This Software License does not grant any rights with respect to
+ third party software, except those rights that Brigham has been
+ authorized by a third party to grant to you, and accordingly you
+ are solely responsible for (i) obtaining any permissions from third
+ parties that you need to use, reproduce, make derivative works of,
+ display and distribute the Software, and (ii) informing your
+ sublicensees, including without limitation your end-users, of their
+ obligations to secure any such required permissions.
+ .
+ 4. The Software has been designed for research purposes only and has
+ not been reviewed or approved by the Food and Drug Administration
+ or by any other agency. YOU ACKNOWLEDGE AND AGREE THAT CLINICAL
+ APPLICATIONS ARE NEITHER RECOMMENDED NOR ADVISED. Any
+ commercialization of the Software is at the sole risk of the party
+ or parties engaged in such commercialization. You further agree to
+ use, reproduce, make derivative works of, display and distribute
+ the Software in compliance with all applicable governmental laws,
+ regulations and orders, including without limitation those relating
+ to export and import control.
+ .
+ 5. The Software is provided "AS IS" and neither Brigham nor any
+ contributor to the software (each a "Contributor") shall have any
+ obligation to provide maintenance, support, updates, enhancements
+ or modifications thereto. BRIGHAM AND ALL CONTRIBUTORS SPECIFICALLY
+ DISCLAIM ALL EXPRESS AND IMPLIED WARRANTIES OF ANY KIND INCLUDING,
+ BUT NOT LIMITED TO, ANY WARRANTIES OF MERCHANTABILITY, FITNESS FOR
+ A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL
+ BRIGHAM OR ANY CONTRIBUTOR BE LIABLE TO ANY PARTY FOR DIRECT,
+ INDIRECT, SPECIAL, INCIDENTAL, EXEMPLARY OR CONSEQUENTIAL DAMAGES
+ HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY ARISING IN ANY WAY
+ RELATED TO THE SOFTWARE, EVEN IF BRIGHAM OR ANY CONTRIBUTOR HAS
+ BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. TO THE MAXIMUM
+ EXTENT NOT PROHIBITED BY LAW OR REGULATION, YOU FURTHER ASSUME ALL
+ LIABILITY FOR YOUR USE, REPRODUCTION, MAKING OF DERIVATIVE WORKS,
+ DISPLAY, LICENSE OR DISTRIBUTION OF THE SOFTWARE AND AGREE TO
+ INDEMNIFY AND HOLD HARMLESS BRIGHAM AND ALL CONTRIBUTORS FROM AND
+ AGAINST ANY AND ALL CLAIMS, SUITS, ACTIONS, DEMANDS AND JUDGMENTS
+ ARISING THEREFROM.
+ .
+ 6. None of the names, logos or trademarks of Brigham or any of
+ Brigham's affiliates or any of the Contributors, or any funding
+ agency, may be used to endorse or promote products produced in
+ whole or in part by operation of the Software or derived from or
+ based on the Software without specific prior written permission
+ from the applicable party.
+ .
+ 7. Any use, reproduction or distribution of the Software which is not
+ in accordance with this Software License shall automatically revoke
+ all rights granted to you under this Software License and render
+ Paragraphs 1 and 2 of this Software License null and void.
+ .
+ 8. This Software License does not grant any rights in or to any
+ intellectual property owned by Brigham or any Contributor except
+ those rights expressly granted hereunder.
+ .
+ PART C. MISCELLANEOUS
+ .
+ This Agreement shall be governed by and construed in accordance with
+ the laws of The Commonwealth of Massachusetts without regard to
+ principles of conflicts of law. This Agreement shall supercede and
+ replace any license terms that you may have agreed to previously with
+ respect to Slicer.
+
+Files: vtkVmtk/Segmentation/itkAnisotropicDiffusionVesselEnhancementFunction.h
+ vtkVmtk/Segmentation/itkAnisotropicDiffusionVesselEnhancementFunction.txx
- vtkVmtk/Segmentation/itkAnisotropicDiffusionVesselEnhancementImageFilter.h
+ vtkVmtk/Segmentation/itkAnisotropicDiffusionVesselEnhancementImageFilter.txx
+ vtkVmtk/Segmentation/itkFastMarchingDirectionalFreezeImageFilter.h
+ vtkVmtk/Segmentation/itkFastMarchingDirectionalFreezeImageFilter.txx
+ vtkVmtk/Segmentation/itkFastMarchingUpwindGradientImageFilter.h
+ vtkVmtk/Segmentation/itkFastMarchingUpwindGradientImageFilter.txx
+ vtkVmtk/Segmentation/itkHessianSmoothed3DToVesselnessMeasureImageFilter.h
+ vtkVmtk/Segmentation/itkHessianSmoothed3DToVesselnessMeasureImageFilter.txx
- vtkVmtk/Segmentation/itkHessianToObjectnessMeasureImageFilter.h
- vtkVmtk/Segmentation/itkHessianToObjectnessMeasureImageFilter.txx
- vtkVmtk/Segmentation/itkMultiScaleHessianBasedMeasureImageFilter.h
- vtkVmtk/Segmentation/itkMultiScaleHessianBasedMeasureImageFilter.txx
+ vtkVmtk/Segmentation/itkSymmetricEigenVectorAnalysisImageFilter.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterSF.h
- vtkVmtk/Utilities/vtkvmtkITK/vtkvmtkITKImageToImageFilterSUL.h
+Copyright: 1999-2009, Insight Software Consortium
- License: BSD (3-clause)
- Redistribution and use in source and binary forms, with or without
- modification, are permitted provided that the following conditions are met:
- .
- * Redistributions of source code must retain the above copyright notice,
- this list of conditions and the following disclaimer.
- .
- * Redistributions in binary form must reproduce the above copyright notice,
- this list of conditions and the following disclaimer in the documentation
- and/or other materials provided with the distribution.
- .
- * Neither the name of the Insight Software Consortium nor the names of its
- contributors may be used to endorse or promote products derived from this
- software without specific prior written permission.
- .
- THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
- ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
- WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
- DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
- ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
- (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
- LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
- ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
- (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
- SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
++License: BSD-3-clause
+
+Files: vtkVmtk/Common/vtkvmtkWin32Header.h
+ vtkVmtk/Misc/vtkvmtkStaticTemporalInterpolatedVelocityField.cxx
+ vtkVmtk/Misc/vtkvmtkStaticTemporalStreamTracer.cxx
+Copyright: 1993-2009, Ken Martin
+ 1993-2009, Will Schroeder
+ 1993-2009, Bill Lorensen
- License: The Visualization Toolkit (VTK) License
++License: The-Visualization-Toolkit-(VTK)-License
+
+Files: vtkVmtk/ComputationalGeometry/vtkvmtkAppendFilter.h
+ vtkVmtk/Misc/vtkvmtkStaticTemporalInterpolatedVelocityField.h
+ vtkVmtk/Misc/vtkvmtkStaticTemporalStreamTracer.h
+Copyright: 1993-2009, Ken Martin
+ 1993-2009, Will Schroeder
+ 1993-2009, Bill Lorensen
+ 2004-2012, Luca Antiga
+ 2004-2012, David Steinman
- License: The Visualization Toolkit (VTK) License
++License: The-Visualization-Toolkit-(VTK)-License
+
+Files: vtkVmtk/Utilities/OpenNL/nl.h
+ vtkVmtk/Utilities/OpenNL/nl_single_file.c
+Copyright: 2004-2010, Bruno Levy <levy at loria.fr>
- License: BSD style
++License: BSD-3-style
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are met:
+ .
+ * Redistributions of source code must retain the above copyright notice,
+ this list of conditions and the following disclaimer.
+ * Redistributions in binary form must reproduce the above copyright notice,
+ this list of conditions and the following disclaimer in the documentation
+ and/or other materials provided with the distribution.
+ * Neither the name of the ALICE Project-Team nor the names of its
+ contributors may be used to endorse or promote products derived from this
+ software without specific prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
+ LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+ SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+ INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+ CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+ POSSIBILITY OF SUCH DAMAGE.
+ .
+ If you modify this software, you should include a notice giving the
+ name of the person performing the modification, the date of modification,
+ and the reason for such modification.
+ .
+ Contact: Bruno Levy
+ .
+ levy at loria.fr
+ .
+ ALICE Project
+ LORIA, INRIA Lorraine,
+ Campus Scientifique, BP 239
+ 54506 VANDOEUVRE LES NANCY CEDEX
+ FRANCE
+
+Files: vtkVmtk/Utilities/Stellar_1.0/*
+Copyright: 1995-1998, Jonathan Richard Shewchuk
+ 2006-2008, Bryan Klingner
- License: BSD (3-clause)
- Redistribution and use in source and binary forms, with or without
- modification, are permitted provided that the following conditions are
- met:
- .
- - Redistributions of source code must retain the above copyright notice,
- this list of conditions and the following disclaimer.
- .
- - Redistributions in binary form must reproduce the above copyright
- notice, this list of conditions and the following disclaimer in the
- documentation and/or other materials provided with the distribution.
- .
- - Neither the name of Jonathan Shewchuk nor the name of the University
- of California nor the names of its contributors may be used to endorse
- or promote products derived from this software without specific prior
- written permission.
- .
- THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS
- IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
- TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
- PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
- OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
- SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED
- TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
- PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
- LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
- NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
- SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
++License: BSD-3-clause
+Comment:
+ There is no license information in these files but the license is stated
+ on the Stellar webpage: http://www.cs.berkeley.edu/~jrs/stellar/#about
+
+Files: vtkVmtk/Utilities/tetgen1.4.3/tetgen.cxx
+ vtkVmtk/Utilities/tetgen1.4.3/tetgen.h
+Copyright: 2002-2009, Hang Si <si at wias-berlin.de>
- License: Modified MIT
++License: Modified-MIT
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense and/or sell copies of the Software, and to
+ permit persons to whom the Software is furnished to do so, subject to
+ the following conditions:
+ .
+ Distribution of modified versions of this code is permissible UNDER
+ THE CONDITION THAT THIS CODE AND ANY MODIFICATIONS MADE TO IT IN THE
+ SAME SOURCE FILES tetgen.h AND tetgen.cxx REMAIN UNDER COPYRIGHT OF
+ THE ORIGINAL AUTHOR, BOTH SOURCE AND OBJECT CODE ARE MADE FREELY
+ AVAILABLE WITHOUT CHARGE, AND CLEAR NOTICE IS GIVEN OF THE
+ MODIFICATIONS.
+ .
+ Distribution of this code for any commercial purpose is permissible
+ ONLY BY DIRECT ARRANGEMENT WITH THE COPYRIGHT OWNER.
+ .
+ The above copyright notice and this permission notice shall be
+ included in all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+ IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
+ CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
+ TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
+ SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+Files: vtkVmtk/Utilities/tetgen1.4.3/predicates.cxx
+Copyright: 1996, Jonathan Richard Shewchuk
+License: public-domain
+ Routines for Arbitrary Precision Floating-point Arithmetic
+ and Fast Robust Geometric Predicates
+ (predicates.c)
+ .
+ May 18, 1996
+ .
+ Placed in the public domain by
+ Jonathan Richard Shewchuk
+ School of Computer Science
+ Carnegie Mellon University
+ 5000 Forbes Avenue
+ Pittsburgh, Pennsylvania 15213-3891
+ jrs at cs.cmu.edu
+ .
+ This file contains C implementation of algorithms for exact addition
+ and multiplication of floating-point numbers, and predicates for
+ robustly performing the orientation and incircle tests used in
+ computational geometry. The algorithms and underlying theory are
+ described in Jonathan Richard Shewchuk. "Adaptive Precision Floating-
+ Point Arithmetic and Fast Robust Geometric Predicates." Technical
+ Report CMU-CS-96-140, School of Computer Science, Carnegie Mellon
+ University, Pittsburgh, Pennsylvania, May 1996. (Submitted to
+ Discrete & Computational Geometry.)
+ .
+ This file, the paper listed above, and other information are available
+ from the Web page http://www.cs.cmu.edu/~quake/robust.html .
+
- License: The Visualization Toolkit (VTK) License
++License: The-Visualization-Toolkit-(VTK)-License
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are met:
+ .
+ * Redistributions of source code must retain the above copyright notice,
+ this list of conditions and the following disclaimer.
+ .
+ * Redistributions in binary form must reproduce the above copyright notice,
+ this list of conditions and the following disclaimer in the documentation
+ and/or other materials provided with the distribution.
+ .
+ * Neither name of Ken Martin, Will Schroeder, or Bill Lorensen nor the names
+ of any contributors may be used to endorse or promote products derived from
+ this software without specific prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS'' AND
+ ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+ WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+ DISCLAIMED. IN NO EVENT SHALL THE AUTHORS OR CONTRIBUTORS BE LIABLE FOR
+ ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+ (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
+ LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+ (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
++
++License: BSD-3-clause
++ Redistribution and use in source and binary forms, with or without
++ modification, are permitted provided that the following conditions are
++ met:
++ .
++ 1. Redistributions of source code must retain the above copyright
++ notice, this list of conditions and the following disclaimer.
++ .
++ 2. Redistributions in binary form must reproduce the above copyright
++ notice, this list of conditions and the following disclaimer in the
++ documentation and/or other materials provided with the distribution.
++ .
++ 3. Neither the name of Orobix Srl, the Mario Negri Institute, of the
++ University of Toronto, nor the names of its contributors may be used
++ to endorse or promote products derived from this software without
++ specific prior written permission.
++ .
++ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
++ "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
++ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
++ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
++ OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
++ SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
++ LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
++ DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
++ THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
++ (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
++ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
diff --cc debian/watch
index 911604e,0000000..a8b4c13
mode 100644,000000..100644
--- a/debian/watch
+++ b/debian/watch
@@@ -1,2 -1,0 +1,3 @@@
+version=3
- https://github.com/vmtk/vmtk/releases .*/archive/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
++opts=filenamemangle=s/.+\/v?(\d\S*)\.tar\.gz/vmtk-$1\.tar\.gz/ \
++ https://github.com/vmtk/vmtk/releases .*/archive/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/vmtk.git
More information about the debian-science-commits
mailing list