[mmdb] 02/08: Merge tag 'upstream/2.0.5'

[Frédéric-Emmanuel Picca]

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picca pushed a commit to branch master
in repository mmdb.

commit 40674b4bf259ee9d58f7c926a14614e375ea33aa
Merge: f304e39 855a8bf
Author: Picca Frédéric-Emmanuel <picca at debian.org>
Date:   Tue Aug 16 09:21:55 2016 +0200

    Merge tag 'upstream/2.0.5'
    
    Upstream version 2.0.5

 Makefile.in                 |  63 ++++--
 aclocal.m4                  | 180 ++++++++++++---
 build-aux/ar-lib            |   2 +-
 build-aux/compile           | 347 +++++++++++++++++++++++++++++
 build-aux/config.guess      | 201 +++--------------
 build-aux/config.sub        |  53 +++--
 build-aux/depcomp           | 531 +++++++++++++++++++++++++++++---------------
 build-aux/install-sh        | 385 +++++++++++++++-----------------
 build-aux/ltmain.sh         |   0
 build-aux/missing           | 461 +++++++++++++-------------------------
 config.h.in                 |   0
 configure                   | 383 +++++++++++++++++++++++---------
 configure.ac                |   2 +-
 m4/libtool.m4               | 277 ++++++++++++++++++-----
 m4/ltoptions.m4             |  19 +-
 m4/ltsugar.m4               |   0
 m4/ltversion.m4             |   0
 m4/lt~obsolete.m4           |   0
 mmdb2/hybrid_36.cpp         |  18 +-
 mmdb2/hybrid_36.h           |  23 ++
 mmdb2/mmdb_atom.cpp         | 185 ++++++++++++---
 mmdb2/mmdb_atom.h           |  14 +-
 mmdb2/mmdb_chain.cpp        |  76 ++++---
 mmdb2/mmdb_coormngr.cpp     | 155 +++++++++----
 mmdb2/mmdb_coormngr.h       |  70 ++++--
 mmdb2/mmdb_defs.h           |   8 +-
 mmdb2/mmdb_io_file.cpp      |   2 +-
 mmdb2/mmdb_io_file.h        |   1 +
 mmdb2/mmdb_math_bfgsmin.cpp |   3 +-
 mmdb2/mmdb_mattype.h        |   6 +-
 mmdb2/mmdb_mmcif_.cpp       |  10 +-
 mmdb2/mmdb_model.cpp        | 106 ++++++---
 mmdb2/mmdb_model.h          |   7 +-
 mmdb2/mmdb_root.cpp         | 179 +++++++++------
 mmdb2/mmdb_root.h           |  12 +-
 mmdb2/mmdb_rwbrook.cpp      |  45 ++++
 mmdb2/mmdb_rwbrook.h        |  16 ++
 mmdb2/mmdb_selmngr.cpp      |  50 +++--
 mmdb2/mmdb_selmngr.h        |   2 +-
 mmdb2/mmdb_tables.cpp       |  32 ++-
 mmdb2/mmdb_tables.h         |   9 +-
 mmdb2/mmdb_title.h          |   2 +-
 mmdb2/mmdb_utils.cpp        |   5 +-
 mmdb2/mmdb_utils.h          |   2 +-
 44 files changed, 2541 insertions(+), 1401 deletions(-)

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