[getfem] 03/04: Merge tag 'upstream/5.1+dfsg1'
Anton Gladky
gladk at moszumanska.debian.org
Tue Aug 23 18:47:15 UTC 2016
This is an automated email from the git hooks/post-receive script.
gladk pushed a commit to branch master
in repository getfem.
commit b97cda840a86db0ea4775b1d19f28eea7718041e
Merge: 32cbff8 aae1c00
Author: Anton Gladky <gladk at debian.org>
Date: Tue Aug 23 20:44:24 2016 +0200
Merge tag 'upstream/5.1+dfsg1'
Upstream version 5.1+dfsg1
Makefile.in | 55 +-
aclocal.m4 | 67 +-
bin/Makefile.in | 25 +-
bin/extract_doc | 203 +-
bin/fig2eps | 4 +-
config.guess | 47 +-
config.h.in | 9 +-
config.sub | 36 +-
configure.ac | 32 +-
contrib/Makefile.am | 2 +-
contrib/Makefile.in | 27 +-
contrib/aposteriori/Makefile.in | 29 +-
contrib/aposteriori/aposteriori.cc | 29 +-
contrib/aposteriori/aposteriori.pl | 2 +-
contrib/aposteriori/aposteriori_laplacian.cc | 23 +-
contrib/aposteriori/aposteriori_laplacian.pl | 2 +-
contrib/bimaterial_crack_test/Makefile.in | 29 +-
.../bimaterial_crack_test/bimaterial_crack_test.cc | 872 ++-
.../bimaterial_crack_test/bimaterial_crack_test.pl | 2 +-
contrib/bimaterial_crack_test/crack.cc | 770 ++-
contrib/bimaterial_crack_test/crack.pl | 2 +-
.../bimaterial_crack_test/crack_exact_solution.cc | 15 +-
.../bimaterial_crack_test/crack_exact_solution.h | 2 +-
contrib/bimaterial_crack_test/getfem_Xfem.cc | 8 +-
contrib/bimaterial_crack_test/getfem_Xfem.h | 2 +-
contrib/bimaterial_crack_test/getfem_spider_fem.h | 18 +-
contrib/crack_plate/Makefile.in | 29 +-
contrib/crack_plate/crack_bilaplacian.cc | 2 +-
contrib/crack_plate/crack_bilaplacian.h | 6 +-
contrib/crack_plate/crack_bilaplacian_moment.cc | 4 +-
contrib/crack_plate/crack_bilaplacian_problem.cc | 68 +-
contrib/crack_plate/crack_bilaplacian_sif.cc | 2 +-
.../crack_plate/crack_bilaplacian_singularities.cc | 16 +-
contrib/crack_plate/crack_bilaplacian_tools.cc | 2 +-
contrib/crack_plate/crack_mindlin.cc | 12 +-
contrib/crack_plate/crack_mindlin.pl | 2 +-
contrib/delaminated_crack/Makefile.in | 29 +-
contrib/delaminated_crack/delaminated_crack.cc | 14 +-
contrib/delaminated_crack/delaminated_crack.pl | 2 +-
contrib/icare/Makefile.in | 29 +-
contrib/icare/icare.cc | 17 +-
contrib/icare/icare.h | 2 +-
contrib/icare/icare.pl | 2 +-
contrib/inter_element_test/Makefile.am | 16 -
contrib/inter_element_test/inter_element.cc | 257 -
contrib/inter_element_test/inter_element.pl | 18 -
contrib/level_set_contact/Makefile.in | 29 +-
contrib/level_set_contact/contact_2D.param | 106 +-
contrib/level_set_contact/contact_problem.cpp | 2 +-
contrib/level_set_contact/contact_problem.h | 2 +-
contrib/level_set_contact/contact_problem.pl | 2 +-
contrib/level_set_contact/test_contact.cpp | 301 +-
contrib/mixed_elastostatic/Makefile.in | 29 +-
contrib/mixed_elastostatic/mixed_elastostatic.cc | 2 +-
contrib/mixed_elastostatic/mixed_elastostatic.pl | 2 +-
contrib/static_contact_gears/Makefile.in | 29 +-
.../static_contact_gears/static_contact_gears.cc | 9 +-
.../static_contact_gears/static_contact_gears.pl | 2 +-
.../static_contact_gears_u1_u2.cc | 7 +-
contrib/test_plasticity/Makefile.am | 17 +
.../Makefile.in | 231 +-
.../test_plasticity/test_plasticity.py | 11 +-
.../test_small_strain_plasticity.py | 599 ++
contrib/xfem_contact/Makefile.in | 29 +-
contrib/xfem_contact/xfem_contact.cc | 2 +-
contrib/xfem_contact/xfem_contact.pl | 2 +-
contrib/xfem_contact/xfem_dirichlet.cc | 11 +-
contrib/xfem_contact/xfem_stokes.cc | 5 +-
contrib/xfem_stab_unilat_contact/Makefile.in | 29 +-
.../xfem_stab_unilat_contact.cc | 21 +-
.../xfem_stab_unilat_contact.pl | 2 +-
cubature/Makefile.in | 25 +-
cubature/getfem_im_list.h | 6076 ++++++++++----------
doc/Makefile.in | 25 +-
doc/sphinx/Makefile.am | 9 +-
doc/sphinx/Makefile.in | 34 +-
doc/sphinx/source/userdoc/images/Makefile | 5 +-
install-sh | 373 +-
interface/Makefile.in | 25 +-
interface/src/Makefile.am | 176 +-
interface/src/Makefile.in | 224 +-
interface/src/getfem_interface.cc | 9 +-
interface/src/getfem_interface.h | 2 +-
interface/src/getfemint.cc | 1003 ++--
interface/src/getfemint.h | 608 +-
interface/src/getfemint_cont_struct.h | 83 -
interface/src/getfemint_convex_structure.cc | 50 -
interface/src/getfemint_convex_structure.h | 45 -
interface/src/getfemint_global_function.cc | 50 -
interface/src/getfemint_global_function.h | 69 -
interface/src/getfemint_gsparse.cc | 85 +-
interface/src/getfemint_gsparse.h | 116 +-
interface/src/getfemint_gsparse_misc.cc | 106 -
interface/src/getfemint_gsparse_misc.h | 42 -
interface/src/getfemint_integ.cc | 50 -
interface/src/getfemint_integ.h | 48 -
interface/src/getfemint_levelset.cc | 38 +-
interface/src/getfemint_levelset.h | 46 +-
interface/src/getfemint_matelem.cc | 51 -
interface/src/getfemint_matelem.h | 48 -
interface/src/getfemint_matelemtype.cc | 50 -
interface/src/getfemint_matelemtype.h | 48 -
interface/src/getfemint_mesh.cc | 50 -
interface/src/getfemint_mesh_fem.cc | 68 -
interface/src/getfemint_mesh_fem.h | 82 -
interface/src/getfemint_mesh_im.cc | 65 -
interface/src/getfemint_mesh_im.h | 76 -
interface/src/getfemint_mesh_im_data.cc | 75 -
interface/src/getfemint_mesh_im_data.h | 83 -
interface/src/getfemint_mesh_levelset.cc | 55 -
interface/src/getfemint_mesh_levelset.h | 71 -
interface/src/getfemint_mesh_slice.h | 73 -
interface/src/getfemint_mesher_object.h | 83 -
interface/src/getfemint_misc.cc | 85 +-
interface/src/getfemint_misc.h | 10 +-
interface/src/getfemint_models.h | 81 -
interface/src/getfemint_object.h | 105 -
interface/src/getfemint_pfem.cc | 115 -
interface/src/getfemint_pfem.h | 69 -
interface/src/getfemint_pgt.cc | 50 -
interface/src/getfemint_pgt.h | 46 -
interface/src/getfemint_poly.h | 70 -
interface/src/getfemint_precond.h | 97 +-
interface/src/getfemint_std.h | 11 +-
interface/src/getfemint_workspace.cc | 339 +-
interface/src/getfemint_workspace.h | 157 +-
interface/src/gf_asm.cc | 233 +-
interface/src/gf_compute.cc | 61 +-
interface/src/gf_cont_struct.cc | 210 +-
interface/src/gf_cont_struct_get.cc | 11 +-
interface/src/gf_cvstruct_get.cc | 34 +-
interface/src/gf_delete.cc | 2 +-
interface/src/gf_eltm.cc | 18 +-
interface/src/gf_fem.cc | 39 +-
interface/src/gf_fem_get.cc | 88 +-
interface/src/gf_geotrans.cc | 8 +-
interface/src/gf_geotrans_get.cc | 14 +-
interface/src/gf_global_function.cc | 60 +-
interface/src/gf_global_function_get.cc | 16 +-
interface/src/gf_integ.cc | 8 +-
interface/src/gf_integ_get.cc | 16 +-
interface/src/gf_levelset.cc | 21 +-
interface/src/gf_levelset_get.cc | 22 +-
interface/src/gf_levelset_set.cc | 31 +-
interface/src/gf_linsolve.cc | 35 +-
interface/src/gf_mesh.cc | 36 +-
interface/src/gf_mesh_fem.cc | 209 +-
interface/src/gf_mesh_fem_get.cc | 110 +-
interface/src/gf_mesh_fem_set.cc | 42 +-
interface/src/gf_mesh_get.cc | 98 +-
interface/src/gf_mesh_im.cc | 104 +-
interface/src/gf_mesh_im_data.cc | 21 +-
interface/src/gf_mesh_im_data_get.cc | 50 +-
interface/src/gf_mesh_im_data_set.cc | 7 +-
interface/src/gf_mesh_im_get.cc | 62 +-
interface/src/gf_mesh_im_set.cc | 11 +-
interface/src/gf_mesh_levelset.cc | 18 +-
interface/src/gf_mesh_levelset_get.cc | 38 +-
interface/src/gf_mesh_levelset_set.cc | 33 +-
interface/src/gf_mesh_set.cc | 114 +-
interface/src/gf_mesher_object.cc | 121 +-
interface/src/gf_mesher_object_get.cc | 17 +-
interface/src/gf_model.cc | 16 +-
interface/src/gf_model_get.cc | 849 ++-
interface/src/gf_model_set.cc | 1050 ++--
interface/src/gf_precond.cc | 120 +-
interface/src/gf_precond_get.cc | 57 +-
interface/src/gf_slice.cc | 151 +-
interface/src/gf_slice_get.cc | 58 +-
interface/src/gf_slice_set.cc | 13 +-
interface/src/gf_spmat.cc | 77 +-
interface/src/gf_spmat_get.cc | 25 +-
interface/src/gf_spmat_set.cc | 13 +-
interface/src/gf_undelete.cc | 67 -
interface/src/gf_util.cc | 9 +-
interface/src/gf_workspace.cc | 80 +-
interface/src/gfi_array.c | 2 +-
interface/src/gfi_array.h | 30 +-
interface/src/gfi_rpc.h | 2 +-
interface/src/gfi_rpc_clnt.c | 2 +-
interface/src/gfi_rpc_server.c | 2 +-
interface/src/gfi_rpc_svc.c | 2 +-
interface/src/gfi_rpc_xdr.c | 2 +-
interface/src/matlab/Makefile.in | 25 +-
interface/src/matlab/private/Makefile.in | 25 +-
interface/src/python/Makefile.am | 2 +-
interface/src/python/Makefile.in | 30 +-
interface/src/python/getfem.py | 542 +-
interface/src/python/getfem_python.c | 264 +-
interface/tests/Makefile.in | 25 +-
interface/tests/matlab/Makefile.am | 111 +-
interface/tests/matlab/Makefile.in | 139 +-
interface/tests/matlab/axrot_matrix.m | 2 +-
interface/tests/matlab/check_all.m | 11 +-
interface/tests/matlab/check_asm.m | 2 +-
interface/tests/matlab/check_fem.m | 5 +-
interface/tests/matlab/check_geotrans.m | 2 +-
interface/tests/matlab/check_integ.m | 2 +-
interface/tests/matlab/check_mesh_fem.m | 29 +-
interface/tests/matlab/check_oo.m | 2 +-
interface/tests/matlab/check_plasticity.m | 11 +-
interface/tests/matlab/check_plot.m | 2 +-
interface/tests/matlab/check_slices.m | 2 +-
interface/tests/matlab/check_spmat.m | 2 +-
interface/tests/matlab/check_workspace.m | 2 +-
.../tests/matlab/demo_Mindlin_Reissner_plate.m | 2 +-
interface/tests/matlab/demo_Navier_Stokes.m | 157 +
.../tests/matlab/demo_Nitsche_contact_by_hand.m | 501 ++
interface/tests/matlab/demo_bilaplacian.m | 2 +-
.../demo_contact_fictitious_domain_nitsche.m | 624 ++
interface/tests/matlab/demo_continuation.m | 173 +
.../tests/matlab/demo_convection_rotating_cavity.m | 135 +
interface/tests/matlab/demo_crack.m | 176 +
interface/tests/matlab/demo_dynamic_plasticity.m | 479 ++
interface/tests/matlab/demo_elasticity.m | 2 +-
interface/tests/matlab/demo_fictitious_domains.m | 151 +
.../matlab/demo_fictitious_domains_laplacian.m | 244 +
interface/tests/matlab/demo_laplacian.m | 6 +-
.../{demo_laplacian.m => demo_laplacian_DG.m} | 80 +-
.../tests/matlab/demo_large_sliding_contact.m | 427 ++
interface/tests/matlab/demo_mesh_generation.m | 96 +
interface/tests/matlab/demo_mortar.m | 108 +
interface/tests/matlab/demo_nonlinear_elasticity.m | 10 +-
.../tests/matlab/demo_nonlinear_elasticity_anim.m | 2 +-
interface/tests/matlab/demo_periodic_laplacian.m | 2 +-
interface/tests/matlab/demo_plasticity.m | 22 +-
interface/tests/matlab/demo_refine.m | 106 +
interface/tests/matlab/demo_static_contact.m | 414 ++
interface/tests/matlab/demo_step_by_step.m | 62 +
interface/tests/matlab/demo_stokes_3D_tank.m | 107 +
interface/tests/matlab/demo_stokes_3D_tank_draw.m | 51 +
.../tests/matlab/demo_structural_optimization.m | 420 ++
.../demo_thermo_elasticity_electrical_coupling.m | 229 +
.../tests/matlab/demo_topological_optimization.m | 157 +
interface/tests/matlab/demo_tripod.m | 133 +
interface/tests/matlab/demo_tripod_alt.m | 104 +
interface/tests/matlab/demo_tripod_slice_anim.m | 58 +
interface/tests/matlab/demo_wave2D.m | 180 +
interface/tests/matlab/demo_wave2D_alt.m | 161 +
interface/tests/matlab/demo_wave_equation.m | 83 +
interface/tests/matlab/demo_wheel_contact.m | 165 +
interface/tests/matlab/private/Makefile.in | 25 +-
interface/tests/matlab/private/asserterr.m | 2 +-
interface/tests/matlab/private/gfassert.m | 2 +-
interface/tests/matlab/test_argyris.m | 97 +
interface/tests/matlab/tripod_anim.m | 51 +
interface/tests/matlab/tutorial1.m | 47 +
interface/tests/meshes/Makefile.in | 25 +-
interface/tests/python/Makefile.am | 11 +-
interface/tests/python/Makefile.in | 38 +-
interface/tests/python/demo_crack.py | 144 +-
interface/tests/python/demo_laplacian.py | 51 +-
.../{demo_laplacian.py => demo_laplacian_DG.py} | 96 +-
interface/tests/python/demo_mortar.py | 4 +-
.../tests/python/demo_nonlinear_elasticity.py | 242 +
interface/tests/python/demo_plasticity.py | 57 +-
.../demo_thermo_elasticity_electrical_coupling.py | 4 +-
interface/tests/python/demo_tripod.py | 10 +-
interface/tests/python/demo_tripod_alt.py | 26 +-
m4/Makefile.in | 25 +-
m4/libtool.m4 | 2521 ++++----
m4/ltoptions.m4 | 127 +-
m4/ltsugar.m4 | 7 +-
m4/ltversion.m4 | 12 +-
m4/lt~obsolete.m4 | 7 +-
src/Makefile.am | 9 +-
src/Makefile.in | 48 +-
src/bgeot_convex_ref.cc | 259 +-
src/bgeot_convex_ref_simplexified.cc | 4 +-
src/bgeot_convex_structure.cc | 418 +-
src/bgeot_ftool.cc | 14 +-
src/bgeot_geometric_trans.cc | 43 +-
src/bgeot_geotrans_inv.cc | 2 +-
src/bgeot_kdtree.cc | 84 +-
src/bgeot_mesh_structure.cc | 71 +-
src/bgeot_node_tab.cc | 51 +-
src/bgeot_poly.cc | 21 +-
src/bgeot_poly_composite.cc | 132 +-
src/bgeot_rtree.cc | 221 +-
src/bgeot_small_vector.cc | 2 +-
src/bgeot_sparse_tensors.cc | 8 +-
src/dal_backtrace.cc | 2 +-
src/dal_bit_vector.cc | 2 +-
src/dal_singleton.cc | 2 +-
src/dal_static_stored_objects.cc | 546 +-
src/getfem/bgeot_comma_init.h | 2 +-
src/getfem/bgeot_config.h | 13 +-
src/getfem/bgeot_convex.h | 80 +-
src/getfem/bgeot_convex_ref.h | 54 +-
src/getfem/bgeot_convex_structure.h | 106 +-
src/getfem/bgeot_ftool.h | 2 +-
src/getfem/bgeot_geometric_trans.h | 24 +-
src/getfem/bgeot_geotrans_inv.h | 2 +-
src/getfem/bgeot_kdtree.h | 21 +-
src/getfem/bgeot_mesh.h | 11 +-
src/getfem/bgeot_mesh_structure.h | 100 +-
src/getfem/bgeot_node_tab.h | 8 +-
src/getfem/bgeot_permutations.h | 2 +-
src/getfem/bgeot_poly.h | 2 +-
src/getfem/bgeot_poly_composite.h | 4 +-
src/getfem/bgeot_rtree.h | 23 +-
src/getfem/bgeot_small_vector.h | 2 +-
src/getfem/bgeot_sparse_tensors.h | 8 +-
src/getfem/bgeot_tensor.h | 101 +-
src/getfem/dal_backtrace.h | 2 +-
src/getfem/dal_basic.h | 47 +-
src/getfem/dal_bit_vector.h | 6 +-
src/getfem/dal_config.h | 23 +-
src/getfem/dal_naming_system.h | 96 +-
src/getfem/dal_shared_ptr.h | 94 -
src/getfem/dal_singleton.h | 88 +-
src/getfem/dal_static_stored_objects.h | 229 +-
src/getfem/dal_tas.h | 2 +-
src/getfem/dal_tree_sorted.h | 2 +-
src/getfem/getfem_Navier_Stokes.h | 2 +-
src/getfem/getfem_arch_config.h | 19 +-
src/getfem/getfem_assembling.h | 2 +-
src/getfem/getfem_assembling_tensors.h | 183 +-
src/getfem/getfem_config.h | 31 +-
src/getfem/getfem_contact_and_friction_common.h | 9 +-
src/getfem/getfem_contact_and_friction_integral.h | 2 +-
.../getfem_contact_and_friction_large_sliding.h | 4 +-
src/getfem/getfem_contact_and_friction_nodal.h | 30 +-
src/getfem/getfem_context.h | 7 +-
src/getfem/getfem_continuation.h | 10 +-
src/getfem/getfem_convect.h | 2 +-
.../getfem/getfem_copyable_ptr.h | 72 +-
src/getfem/getfem_crack_sif.h | 7 +-
src/getfem/getfem_deformable_mesh.h | 2 +-
src/getfem/getfem_derivatives.h | 2 +-
src/getfem/getfem_error_estimate.h | 117 +-
src/getfem/getfem_export.h | 46 +-
src/getfem/getfem_fem.h | 128 +-
src/getfem/getfem_fem_global_function.h | 112 +
src/getfem/getfem_fem_level_set.h | 4 +-
src/getfem/getfem_fourth_order.h | 68 +-
src/getfem/getfem_generic_assembly.h | 515 +-
src/getfem/getfem_global_function.h | 317 +
src/getfem/getfem_im_data.h | 460 +-
src/getfem/getfem_im_list.h | 6075 +++++++++----------
src/getfem/getfem_import.h | 41 +-
src/getfem/getfem_integration.h | 131 +-
src/getfem/getfem_inter_element.h | 123 -
src/getfem/getfem_interpolated_fem.h | 68 +-
src/getfem/getfem_interpolation.h | 154 +-
src/getfem/getfem_level_set.h | 28 +-
src/getfem/getfem_level_set_contact.h | 51 +-
src/getfem/getfem_linearized_plates.h | 2 +-
src/getfem/getfem_mat_elem.h | 29 +-
src/getfem/getfem_mat_elem_type.h | 10 +-
src/getfem/getfem_mesh.h | 109 +-
src/getfem/getfem_mesh_fem.h | 321 +-
src/getfem/getfem_mesh_fem_global_function.h | 240 +-
src/getfem/getfem_mesh_fem_level_set.h | 2 +-
src/getfem/getfem_mesh_fem_product.h | 2 +-
src/getfem/getfem_mesh_fem_sum.h | 2 +-
src/getfem/getfem_mesh_im.h | 26 +-
src/getfem/getfem_mesh_im_level_set.h | 10 +-
src/getfem/getfem_mesh_level_set.h | 7 +-
src/getfem/getfem_mesh_region.h | 28 +-
src/getfem/getfem_mesh_slice.h | 15 +-
src/getfem/getfem_mesh_slicers.h | 9 +-
src/getfem/getfem_mesher.h | 363 +-
src/getfem/getfem_model_solvers.h | 75 +-
src/getfem/getfem_models.h | 440 +-
src/getfem/getfem_nonlinear_elasticity.h | 384 +-
src/getfem/getfem_omp.h | 113 +-
src/getfem/getfem_partial_mesh_fem.h | 7 +-
src/getfem/getfem_plasticity.h | 322 +-
src/getfem/getfem_projected_fem.h | 19 +-
src/getfem/getfem_regular_meshes.h | 2 +-
src/getfem/getfem_superlu.h | 5 +-
src/getfem/getfem_torus.h | 6 +-
src/getfem_assembling_tensors.cc | 121 +-
src/getfem_boost/intrusive_ptr.hpp | 274 -
src/getfem_contact_and_friction_common.cc | 317 +-
src/getfem_contact_and_friction_integral.cc | 38 +-
src/getfem_contact_and_friction_large_sliding.cc | 162 +-
src/getfem_contact_and_friction_nodal.cc | 87 +-
src/getfem_context.cc | 10 +-
src/getfem_continuation.cc | 2 +-
src/getfem_error_estimate.cc | 2 +-
src/getfem_export.cc | 69 +-
src/getfem_fem.cc | 1170 ++--
src/getfem_fem_composite.cc | 26 +-
src/getfem_fem_global_function.cc | 307 +
src/getfem_fem_level_set.cc | 70 +-
src/getfem_fourth_order.cc | 30 +-
src/getfem_generic_assembly.cc | 4381 +++++++++-----
...lobal_function.cc => getfem_global_function.cc} | 573 +-
src/getfem_im_data.cc | 532 +-
src/getfem_import.cc | 137 +-
src/getfem_integration.cc | 80 +-
src/getfem_integration_composite.cc | 26 +-
src/getfem_inter_element.cc | 184 -
src/getfem_interpolated_fem.cc | 89 +-
src/getfem_interpolation.cc | 2 +-
src/getfem_level_set.cc | 23 +-
src/getfem_level_set_contact.cc | 69 +-
src/getfem_linearized_plates.cc | 9 +-
src/getfem_mat_elem.cc | 27 +-
src/getfem_mat_elem_type.cc | 15 +-
src/getfem_mesh.cc | 124 +-
src/getfem_mesh_fem.cc | 759 +--
src/getfem_mesh_fem_global_function.cc | 795 +--
src/getfem_mesh_fem_level_set.cc | 15 +-
src/getfem_mesh_fem_product.cc | 19 +-
src/getfem_mesh_fem_sum.cc | 17 +-
src/getfem_mesh_im.cc | 48 +-
src/getfem_mesh_im_level_set.cc | 121 +-
src/getfem_mesh_level_set.cc | 142 +-
src/getfem_mesh_region.cc | 43 +-
src/getfem_mesh_slice.cc | 2 +-
src/getfem_mesh_slicers.cc | 6 +-
src/getfem_mesher.cc | 1680 +++---
src/getfem_model_solvers.cc | 2 +-
src/getfem_models.cc | 693 ++-
src/getfem_nonlinear_elasticity.cc | 835 +--
src/getfem_omp.cc | 52 +-
src/getfem_partial_mesh_fem.cc | 6 +-
src/getfem_plasticity.cc | 2408 ++++++--
src/getfem_projected_fem.cc | 37 +-
src/getfem_regular_meshes.cc | 2 +-
src/getfem_superlu.cc | 19 +-
src/getfem_torus.cc | 81 +-
src/gmm/gmm.h | 2 +-
src/gmm/gmm_MUMPS_interface.h | 2 +-
src/gmm/gmm_algobase.h | 2 +-
src/gmm/gmm_blas.h | 234 +-
src/gmm/gmm_blas_interface.h | 5 +-
src/gmm/gmm_condition_number.h | 2 +-
src/gmm/gmm_conjugated.h | 2 +-
src/gmm/gmm_def.h | 9 +-
src/gmm/gmm_dense_Householder.h | 2 +-
src/gmm/gmm_dense_lu.h | 2 +-
src/gmm/gmm_dense_matrix_functions.h | 2 +-
src/gmm/gmm_dense_qr.h | 2 +-
src/gmm/gmm_dense_sylvester.h | 2 +-
src/gmm/gmm_domain_decomp.h | 2 +-
src/gmm/gmm_except.h | 67 +-
src/gmm/gmm_inoutput.h | 2 +-
src/gmm/gmm_interface.h | 2 +-
src/gmm/gmm_interface_bgeot.h | 2 +-
src/gmm/gmm_iter.h | 20 +-
src/gmm/gmm_iter_solvers.h | 2 +-
src/gmm/gmm_kernel.h | 2 +-
src/gmm/gmm_lapack_interface.h | 2 +-
src/gmm/gmm_least_squares_cg.h | 2 +-
src/gmm/gmm_matrix.h | 2 +-
src/gmm/gmm_modified_gram_schmidt.h | 2 +-
src/gmm/gmm_opt.h | 2 +-
src/gmm/gmm_precond.h | 2 +-
src/gmm/gmm_precond_diagonal.h | 2 +-
src/gmm/gmm_precond_ildlt.h | 47 +-
src/gmm/gmm_precond_ildltt.h | 48 +-
src/gmm/gmm_precond_ilu.h | 2 +-
src/gmm/gmm_precond_ilut.h | 2 +-
src/gmm/gmm_precond_ilutp.h | 2 +-
src/gmm/gmm_precond_mr_approx_inverse.h | 2 +-
src/gmm/gmm_range_basis.h | 2 +-
src/gmm/gmm_real_part.h | 2 +-
src/gmm/gmm_ref.h | 2 +-
src/gmm/gmm_scaled.h | 2 +-
src/gmm/gmm_solver_Schwarz_additive.h | 2 +-
src/gmm/gmm_solver_bfgs.h | 2 +-
src/gmm/gmm_solver_bicgstab.h | 2 +-
src/gmm/gmm_solver_cg.h | 2 +-
src/gmm/gmm_solver_constrained_cg.h | 2 +-
src/gmm/gmm_solver_gmres.h | 2 +-
src/gmm/gmm_solver_idgmres.h | 2 +-
src/gmm/gmm_solver_qmr.h | 2 +-
src/gmm/gmm_std.h | 112 +-
src/gmm/gmm_sub_index.h | 2 +-
src/gmm/gmm_sub_matrix.h | 2 +-
src/gmm/gmm_sub_vector.h | 2 +-
src/gmm/gmm_superlu_interface.h | 2 +-
src/gmm/gmm_transposed.h | 2 +-
src/gmm/gmm_tri_solve.h | 2 +-
src/gmm/gmm_vector.h | 125 +-
src/gmm/gmm_vector_to_matrix.h | 2 +-
superlu/Makefile.in | 28 +-
tests/Makefile.in | 29 +-
tests/bilaplacian.cc | 4 +-
tests/bilaplacian.pl | 2 +-
tests/crack.cc | 25 +-
tests/crack.pl | 2 +-
tests/cyl_slicer.cc | 2 +-
tests/cyl_slicer.pl | 2 +-
tests/dynamic_array.cc | 2 +-
tests/dynamic_array.pl | 2 +-
tests/dynamic_tas.cc | 10 +-
tests/dynamic_tas.pl | 2 +-
tests/elastostatic.cc | 2 +-
tests/elastostatic.pl | 2 +-
tests/geo_trans_inv.cc | 2 +-
tests/geo_trans_inv.pl | 2 +-
tests/gmm_torture01_lusolve.cc | 2 +-
tests/gmm_torture05_mult.cc | 2 +-
tests/gmm_torture06_mat_mult.cc | 2 +-
tests/gmm_torture10_qr.cc | 2 +-
tests/gmm_torture15_sub.cc | 8 +-
tests/gmm_torture20_iterative_solvers.cc | 6 +-
tests/heat_equation.cc | 4 +-
tests/heat_equation.pl | 2 +-
tests/helmholtz.cc | 2 +-
tests/helmholtz.pl | 2 +-
tests/integration.cc | 10 +-
tests/integration.pl | 2 +-
tests/laplacian.cc | 7 +-
tests/laplacian.param | 2 +-
tests/laplacian.pl | 2 +-
tests/laplacian_with_bricks.cc | 33 +-
tests/laplacian_with_bricks.param | 35 +-
tests/laplacian_with_bricks.pl | 4 +-
tests/make_gmm_test.pl | 2 +-
tests/nonlinear_elastostatic.cc | 24 +-
tests/nonlinear_elastostatic.pl | 2 +-
tests/nonlinear_membrane.cc | 10 +-
tests/nonlinear_membrane.pl | 2 +-
tests/plasticity.cc | 127 +-
tests/plasticity.param | 12 +-
tests/plasticity.pl | 7 +-
tests/plate.cc | 9 +-
tests/plate.param | 2 +-
tests/plate.pl | 2 +-
tests/poly.cc | 2 +-
tests/poly.pl | 2 +-
tests/schwarz_additive.cc | 2 +-
tests/schwarz_additive.pl | 2 +-
tests/stokes.cc | 2 +-
tests/stokes.pl | 2 +-
tests/test_assembly.cc | 2 +-
tests/test_assembly.pl | 2 +-
tests/test_continuation.cc | 2 +-
tests/test_continuation.pl | 2 +-
tests/test_gmm_matrix_functions.cc | 2 +-
tests/test_gmm_matrix_functions.pl | 2 +-
tests/test_int_set.cc | 2 +-
tests/test_int_set.pl | 2 +-
tests/test_interpolated_fem.cc | 2 +-
tests/test_interpolated_fem.pl | 2 +-
tests/test_interpolation.cc | 50 +-
tests/test_interpolation.pl | 2 +-
tests/test_kdtree.cc | 2 +-
tests/test_kdtree.pl | 2 +-
tests/test_mat_elem.cc | 2 +-
tests/test_mat_elem.pl | 2 +-
tests/test_mesh.cc | 12 +-
tests/test_mesh.pl | 2 +-
tests/test_mesh_generation.cc | 288 +-
tests/test_mesh_generation.pl | 2 +-
tests/test_mesh_im_level_set.cc | 2 +-
tests/test_mesh_im_level_set.pl | 2 +-
tests/test_range_basis.cc | 2 +-
tests/test_range_basis.pl | 2 +-
tests/test_rtree.cc | 2 +-
tests/test_rtree.pl | 2 +-
tests/test_slice.cc | 2 +-
tests/test_slice.pl | 2 +-
tests/test_small_vector.cc | 2 +-
tests/test_small_vector.pl | 2 +-
tests/test_tree_sorted.cc | 2 +-
tests/test_tree_sorted.pl | 2 +-
tests/thermo_elasticity_electrical_coupling.cc | 19 +-
tests/thermo_elasticity_electrical_coupling.param | 4 +-
tests/thermo_elasticity_electrical_coupling.pl | 2 +-
tests/wave_equation.cc | 4 +-
tests/wave_equation.pl | 2 +-
568 files changed, 36527 insertions(+), 27627 deletions(-)
--
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