Bug#598571: libatlas3gf-base: Build of atlas test programm xsl2blastst_pt and xsl1blastst_pt failed

Ferran Obón Santacana ferran.obon at gmail.com
Thu Sep 30 08:11:21 UTC 2010


Package: libatlas3gf-base
Version: 3.8.3-27+custom1
Severity: normal

I have build a custom altas library following the instructions in the README file. Everyting went ok, but when I try to build the test program xsl2blastst_pt and xsl1blast$

make xsl2blastst_pt
gcc -o sl2blastst_pt.o -c -DL2SIZE=4194304 -I/usr/src/atlas-3.8.3/build/atlas-base/include -I/usr/src/atlas-3.8.3/build/atlas-base/../..//include -I/usr/src/atlas-3.8.3/bu$
/usr/src/atlas-3.8.3/build/atlas-base/../..//bin/l2blastst.c:149:29: error: atlas_ptlvl2.h: No such file or directory
make: *** [sl2blastst_pt.o] Error 1

I can however compile other test programs (the non threaded ones) and also "xsl3blastst_pt". Consider me at hand for any future "work" you may need from me.

Best regards,
Ferran Obón

-- System Information:
Debian Release: squeeze/sid
  APT prefers testing
  APT policy: (900, 'testing'), (600, 'unstable'), (400, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.32-5-amd64 (SMP w/4 CPU cores)
Locale: LANG=ca_ES.UTF-8, LC_CTYPE=ca_ES.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages libatlas3gf-base depends on:
ii  libc6                         2.11.2-6   Embedded GNU C Library: Shared lib
ii  libgcc1                       1:4.4.4-8  GCC support library
ii  libgfortran3                  4.4.4-8    Runtime library for GNU Fortran ap

libatlas3gf-base recommends no packages.

Versions of packages libatlas3gf-base suggests:
ii  libblas3gf                    1.2-7      Basic Linear Algebra Reference imp
ii  liblapack3gf                  3.2.2-1    library of linear algebra routines

-- no debconf information





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