Bug#712593: paraview: Requires different version of hdf5 library, else crashes on XMF opening

Wojciech Aniszewski wojciech.aniszewski at coria.fr
Tue Jun 18 08:45:45 UTC 2013


There is none. Sorry, I didn't know that one made it through. Please  
close this one.
regards
Wojtek

Anton Gladky <gladky.anton at gmail.com> a écrit :

> Hi, what is the difference from your previous bugreport #711561?
>
> Anton
>
>
> On 06/17/2013 06:15 PM, Wojciech Aniszewski wrote:
>> Package: paraview
>> Version: 4.0.0~rc1-1
>> Severity: important
>>
>> Opening an xmf file (a descriptive file for an hdf5 format), which was
>> created with current hdf5 version (1.8.8-9.1 as below) causes paraview
>> to produce a warning message and crash.
>> The message is like this:
>> --
>> Warning! ***HDF5 library version mismatched error***
>> The HDF5 header files used to compile this application do not match
>> the version used by the HDF5 library to which this application is linked.
>> Data corruption or segmentation faults may occur if the application
>> continues.
>> This can happen when an application was compiled by one version of HDF5 but
>> linked with a different version of static or shared HDF5 library.
>> You should recompile the application or check your shared library related
>> settings such as 'LD_LIBRARY_PATH'.
>> You can, at your own risk, disable this warning by setting the environment
>> variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.
>> Setting it to 2 or higher will suppress the warning messages totally.
>> Headers are 1.8.10, library is 1.8.8
>> --
>> As the message says, an environment variable can be set to get around
>> this, but in general, HDF5 should be updated in testing. Note that when
>> paraview is not started from a console, user may not see the message at
>> all and end up with program crushing everytime.
>>
>> Wojciech Aniszewski
>>
>>
>> -- System Information:
>> Debian Release: jessie/sid
>>   APT prefers testing
>>   APT policy: (500, 'testing')
>> Architecture: i386 (i686)
>>
>> Kernel: Linux 3.2.0-4-686-pae (SMP w/2 CPU cores)
>> Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
>> Shell: /bin/sh linked to /bin/dash
>>
>> Versions of packages paraview depends on:
>> ii  libavcodec53                   6:0.8.7-1
>> ii  libavformat53                  6:0.8.7-1
>> ii  libavutil51                    6:0.8.7-1
>> ii  libc6                          2.17-3
>> ii  libexpat1                      2.1.0-3
>> ii  libfreetype6                   2.4.9-1.1
>> ii  libgcc1                        1:4.8.0-7
>> ii  libgl1-mesa-glx [libgl1]       8.0.5-6
>> ii  libhdf5-openmpi-7 [libhdf5-7]  1.8.8-9.1
>> ii  libjpeg8                       8d-1
>> ii  libogg0                        1.3.1-1
>> ii  libopenmpi1.3                  1.4.5-1
>> ii  libpng12-0                     1.2.49-4
>> ii  libpython2.7                   2.7.5-4
>> ii  libqt4-help                    4:4.8.4+dfsg-4
>> ii  libqt4-network                 4:4.8.4+dfsg-4
>> ii  libqtcore4                     4:4.8.4+dfsg-4
>> ii  libqtgui4                      4:4.8.4+dfsg-4
>> ii  libqtwebkit4                   2.2.1-5
>> ii  libstdc++6                     4.8.0-7
>> ii  libswscale2                    6:0.8.7-1
>> ii  libtheora0                     1.1.1+dfsg.1-3.1
>> ii  libtiff4                       3.9.6-11
>> ii  libx11-6                       2:1.5.0-1+deb7u1
>> ii  libxml2                        2.8.0+dfsg1-7+nmu1
>> ii  libxt6                         1:1.1.3-1+deb7u1
>> ii  tcl8.4 [tclsh]                 8.4.19-5
>> ii  tcl8.5 [tclsh]                 8.5.11-2
>> ii  zlib1g                         1:1.2.8.dfsg-1
>>
>> Versions of packages paraview recommends:
>> ii  mpi-default-bin  1.0.1
>> ii  paraview-doc     4.0.0~rc1-1
>> ii  paraview-python  4.0.0~rc1-1
>>
>> Versions of packages paraview suggests:
>> pn  h5utils     <none>
>> pn  hdf5-tools  <none>
>>
>>
>
>
>



-- 
Wojtek Aniszewski
[Eng: voyteck aanishevsky]
[Fr:  vôytek anichévsky]

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