[Debichem-devel] Bug#560412: png does not work as expected anymore with batch mode
fourmond at debian.org
Thu Dec 10 23:18:33 UTC 2009
The png command (or the -g command-line argument) does not work
anymore when used in batch mode.
Let's say I have a file structured this way:
# (drawing commands)
If I launch it using
pymol -d '@ file.pml'
I get a nice save.png file of a 200x200 ray-traced picture of my
nice protein. However, if I run:
pymol -c -d '@ file.pml'
save.png is 640x480 and is rebuilt at the time of the png
command. That is really painful, since it stops me from using all my
pymol scripts (I can't afford to run them all by hand).
I guess the graphics context is wrong somehow in command-line mode,
but I don't know more than this.
It was working fine with the 1.1 version.
-- System Information:
Debian Release: squeeze/sid
APT prefers unstable
APT policy: (500, 'unstable'), (500, 'testing'), (500, 'stable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 2.6.31-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_GB, LC_CTYPE=en_GB (charmap=ISO-8859-1)
Shell: /bin/sh linked to /bin/dash
Versions of packages pymol depends on:
ii freeglut3 2.4.0-8 OpenGL Utility Toolkit
ii libc6 2.10.2-2 GNU C Library: Shared libraries
ii libfreetype6 2.3.11-1 FreeType 2 font engine, shared lib
ii libgcc1 1:4.4.2-3 GCC support library
ii libgl1-mesa-glx [libgl 7.6.1~rc2-1 A free implementation of the OpenG
ii libglu1-mesa [libglu1] 7.6.1~rc2-1 The OpenGL utility library (GLU)
ii libpng12-0 1.2.41-1 PNG library - runtime
ii libstdc++6 4.4.2-3 The GNU Standard C++ Library v3
ii python 2.5.4-2 An interactive high-level object-o
ii python-pmw 1.3.2-3 Pmw -- Python MegaWidgets
ii python-support 1.0.6 automated rebuilding support for P
ii python-tk 2.5.2-1.1 Tkinter - Writing Tk applications
ii zlib1g 1:18.104.22.168.dfsg-15 compression library - runtime
Versions of packages pymol recommends:
ii apbs 1.1.0-1 Adaptive Poisson Boltzmann Solver
pymol suggests no packages.
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