[Debichem-devel] [Outreachy] pymol

[Andreas Tille]

Ahh, seems to be ready - so I'll go on for the sponsoring build and upload.

On Sun, Aug 21, 2016 at 01:09:31PM +0300, merlettaia wrote:
> Hi Andreas,
> I've added copyright information to debian/copyright (for UIUC and various
> font files from upstream's layer1/).
> Can you check it? I've kept UIUC license since it differs in 1st paragraph
> from BSD-3-clause mentioned at d/copyright.
> Also layer1/FontTTF.h has complex license, I copied it as it is.
> I've checked everything with cme fix dpkg-copyright.
> 
> 2016-08-20 13:19 GMT+03:00 merlettaia <merlettaia at gmail.com>:
> 
> > Hi Andreas,
> > I've made testsuite for apbs (I took its own tests "(cd tests; python
> > apbs_tester.py -c test_cases.cfg)", installed them to usr/share/apbs, and
> > made sure that they work when installed).
> > Regarding python interface, which is used by pdb2pqr, it is not present in
> > source archive.
> > apbs source releases are available on github, but they contain both apbs
> > and pdb2pqr (probably because they both are developed in the same
> > repository)
> > https://github.com/Electrostatics/apbs-pdb2pqr/releases
> > On SourceForge there are 2 versions of apbs (1.4.1 and 1.4.2), but they
> > both don't have source archive. Version 1.4.0 is old.
> > I asked maintainers via gitter channel to add latest apbs source package
> > to SourceForge, let's see if they'll do it.
> > But probably changing debian/watch to take releases from github might be
> > the option.
> > I also translated debian/copyright to machine-readable format, but I
> > haven't checked if something is missing. There are also MAPBS (matlab
> > scripts) inside tools/ directory, they have their own license, but I
> > haven't installed them and haven't checked if their license present in
> > debian/copyright yet.
> >
> > Regarding pymol, I'll fix debian/copyright now.
> >
> > 2016-08-17 10:57 GMT+03:00 Andreas Tille <andreas at an3as.eu>:
> >
> >> Hi Tanya,
> >>
> >> On Tue, Aug 16, 2016 at 08:01:46PM +0300, merlettaia wrote:
> >> > Could you please take a look at pymol?
> >>
> >> I did now.  I fixed some minor lintian issues (DEP3, override for
> >> spelling).  I also added some Breaks and a versioned dependency which is
> >> important for upgrades when splitting a package.  Please have a look at
> >> the commits to debian/control which might be an interesting lesson for
> >> other packages.
> >>
> >> > I made almost everything possible, except solving this warnings (but I
> >> can
> >> > fix them too):
> >> >
> >> >    I: pymol: desktop-entry-lacks-keywords-entry
> >> > usr/share/applications/pymol.desktop
> >>
> >> Please just let me know if you want to fix this.
> >>
> >> >    W: pymol: command-in-menu-file-and-desktop-file pymol
> >> > usr/share/menu/pymol:7
> >>
> >> Fixed by removal of menu file.
> >>
> >> Thanks again for your tough work.  I'll upload once I hear from you
> >> about the desktop file.  I'd also upload if you confirm: "Uhhmmm, no
> >> idea what keyword would be appropriate."
> >>
> >> Kind regards
> >>
> >>        Andreas.
> >>
> >> --
> >> http://fam-tille.de
> >>
> >
> >
> >
> > --
> > Best wishes,
> > Tanya.
> >
> 
> 
> 
> -- 
> Best wishes,
> Tanya.

-- 
http://fam-tille.de