From owner at bugs.debian.org  Sun May  1 14:21:16 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Sun, 01 May 2016 14:21:16 +0000
Subject: [Debichem-devel] Bug#816085: marked as done (elkcode: FTBFS on mips)
References: <20160501141644.GA9690@aurel32.net>
 <145656907899.26298.11554077747892642865.reportbug@tatooine>
Message-ID: <handler.816085.D816085.146211220819518.ackdone@bugs.debian.org>

Your message dated Sun, 1 May 2016 16:16:44 +0200
with message-id <20160501141644.GA9690 at aurel32.net>
and subject line Bug#816085: elkcode: FTBFS on mips
has caused the Debian Bug report #816085,
regarding elkcode: FTBFS on mips
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner at bugs.debian.org
immediately.)


-- 
816085: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=816085
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems
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From: Emilio Pozuelo Monfort <pochu at debian.org>
Subject: elkcode: FTBFS on mips
Date: Sat, 27 Feb 2016 11:31:18 +0100
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From: Aurelien Jarno <aurelien at aurel32.net>
Subject: Bug#816085: elkcode: FTBFS on mips
Date: Sun, 1 May 2016 16:16:44 +0200
Size: 2436
URL: <http://lists.alioth.debian.org/pipermail/debichem-devel/attachments/20160501/b034bd6e/attachment-0001.mht>

From owner at bugs.debian.org  Mon May  2 15:39:09 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Mon, 02 May 2016 15:39:09 +0000
Subject: [Debichem-devel] Processed: Bug#818432: espresso: FTBFS on armel
 and mips: hangs during the build
References: <20160502153535.GA511@aurel32.net>
 <145817216404.14055.777951503693030971.reportbug@tatooine>
Message-ID: <handler.s.B818432.14622033399862.transcript@bugs.debian.org>

Processing control commands:

> retitle -1 espresso: FTBFS on armel: hangs during the build
Bug #818432 [src:espresso] espresso: FTBFS on armel and mips: hangs during the build
Changed Bug title to 'espresso: FTBFS on armel: hangs during the build' from 'espresso: FTBFS on armel and mips: hangs during the build'.

-- 
818432: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=818432
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems


From aurelien at aurel32.net  Mon May  2 15:35:35 2016
From: aurelien at aurel32.net (Aurelien Jarno)
Date: Mon, 2 May 2016 17:35:35 +0200
Subject: [Debichem-devel] Bug#818432: espresso: FTBFS on armel and mips:
	hangs during the build
In-Reply-To: <145817216404.14055.777951503693030971.reportbug@tatooine>
References: <145817216404.14055.777951503693030971.reportbug@tatooine>
Message-ID: <20160502153535.GA511@aurel32.net>

control: retitle -1 espresso: FTBFS on armel: hangs during the build

On 2016-03-17 00:49, Emilio Pozuelo Monfort wrote:
> Source: espresso
> Version: 5.1+dfsg-4
> Severity: serious
> 
> Your package failed to build on armel and mips. Logs at
> 
> https://buildd.debian.org/status/package.php?p=espresso

The MIPS issue was due to the lack of FPU on the build daemon. It has
now been built successfully on mips-aql-06. Retitling the bug
accordingly.

Aurelien

-- 
Aurelien Jarno                          GPG: 4096R/1DDD8C9B
aurelien at aurel32.net                 http://www.aurel32.net


From noreply at release.debian.org  Mon May  2 16:39:12 2016
From: noreply at release.debian.org (Debian testing watch)
Date: Mon, 02 May 2016 16:39:12 +0000
Subject: [Debichem-devel] elkcode 2.3.22-1 MIGRATED to testing
Message-ID: <E1axGsK-0002ci-H2@franck.debian.org>

FYI: The status of the elkcode source package
in Debian's testing distribution has changed.

  Previous version: (not in testing)
  Current version:  2.3.22-1

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.


From mbanck at debian.org  Mon May  2 17:25:07 2016
From: mbanck at debian.org (Michael Banck)
Date: Mon, 2 May 2016 19:25:07 +0200
Subject: [Debichem-devel] Bug#818432: Bug#818432: espresso: FTBFS on armel
	and mips: hangs during the build
In-Reply-To: <20160502153535.GA511@aurel32.net>
References: <145817216404.14055.777951503693030971.reportbug@tatooine>
 <20160502153535.GA511@aurel32.net>
Message-ID: <20160502172507.GT4872@nighthawk.caipicrew.dd-dns.de>

Hi Aurelien,

On Mon, May 02, 2016 at 05:35:35PM +0200, Aurelien Jarno wrote:
> control: retitle -1 espresso: FTBFS on armel: hangs during the build
> 
> On 2016-03-17 00:49, Emilio Pozuelo Monfort wrote:
> > Source: espresso
> > Version: 5.1+dfsg-4
> > Severity: serious
> > 
> > Your package failed to build on armel and mips. Logs at
> > 
> > https://buildd.debian.org/status/package.php?p=espresso
> 
> The MIPS issue was due to the lack of FPU on the build daemon. It has
> now been built successfully on mips-aql-06. Retitling the bug
> accordingly.

Wow, that's great news we finally have an FPU enabled mips autobuilder.

Not just for Quantum Espresso, but for a whole bunch of other Debichem
packages as well.

Will it be possible to say "please requeue on mips-aql-06" in the
future, in case we suspect testsuite timeouts are due to lack of FPUs?


Michael


From aurelien at aurel32.net  Mon May  2 19:25:08 2016
From: aurelien at aurel32.net (Aurelien Jarno)
Date: Mon, 2 May 2016 21:25:08 +0200
Subject: [Debichem-devel] Bug#818432: Bug#818432: espresso: FTBFS on armel
	and mips: hangs during the build
In-Reply-To: <20160502172507.GT4872@nighthawk.caipicrew.dd-dns.de>
References: <145817216404.14055.777951503693030971.reportbug@tatooine>
 <20160502153535.GA511@aurel32.net>
 <20160502172507.GT4872@nighthawk.caipicrew.dd-dns.de>
Message-ID: <20160502192508.GA5064@aurel32.net>

On 2016-05-02 19:25, Michael Banck wrote:
> Hi Aurelien,
> 
> On Mon, May 02, 2016 at 05:35:35PM +0200, Aurelien Jarno wrote:
> > control: retitle -1 espresso: FTBFS on armel: hangs during the build
> > 
> > On 2016-03-17 00:49, Emilio Pozuelo Monfort wrote:
> > > Source: espresso
> > > Version: 5.1+dfsg-4
> > > Severity: serious
> > > 
> > > Your package failed to build on armel and mips. Logs at
> > > 
> > > https://buildd.debian.org/status/package.php?p=espresso
> > 
> > The MIPS issue was due to the lack of FPU on the build daemon. It has
> > now been built successfully on mips-aql-06. Retitling the bug
> > accordingly.
> 
> Wow, that's great news we finally have an FPU enabled mips autobuilder.
> 
> Not just for Quantum Espresso, but for a whole bunch of other Debichem
> packages as well.
> 
> Will it be possible to say "please requeue on mips-aql-06" in the
> future, in case we suspect testsuite timeouts are due to lack of FPUs?

It means blacklisting the packages on the other build daemons, but
that's doable. We'll also get more autobuilders with FPU in the next
days, so that should get easier.

Aurelien

-- 
Aurelien Jarno                          GPG: 4096R/1DDD8C9B
aurelien at aurel32.net                 http://www.aurel32.net


From noreply at release.debian.org  Tue May  3 04:39:03 2016
From: noreply at release.debian.org (Debian testing autoremoval watch)
Date: Tue, 03 May 2016 04:39:03 +0000
Subject: [Debichem-devel] bagel is marked for autoremoval from testing
Message-ID: <E1axS6x-00023d-Da@franck.debian.org>

bagel 0.0~git20150902-1 is marked for autoremoval from testing on 2016-05-24

It is affected by these RC bugs:
822501: bagel: FTBFS: error: 'inner_product' is not a member of 'std'



From mbanck at debian.org  Tue May  3 23:46:01 2016
From: mbanck at debian.org (Michael Banck)
Date: Wed, 4 May 2016 01:46:01 +0200
Subject: [Debichem-devel] Bug#822501: Bug#822501: bagel: FTBFS: error:
	'inner_product' is not a member of 'std'
In-Reply-To: <20160425011610.GF8599@jirafa.cyrius.com>
References: <20160424225956.0792011F722@dl580gen9-02.hlinux>
 <20160425011610.GF8599@jirafa.cyrius.com>
Message-ID: <20160503234600.GZ4872@nighthawk.caipicrew.dd-dns.de>

tags 822501 +pending
thanks

On Sun, Apr 24, 2016 at 06:16:10PM -0700, Martin Michlmayr wrote:
> This package fails to build in unstable:
> 
> > sbuild (Debian sbuild) 0.68.0 (15 Jan 2016) on dl580gen9-02.hlinux
> ...
> > libtool: compile:  mpicxx -DHAVE_CONFIG_H -I. -I../../.. -I../../.. -g -O2 -DNDEBUG -std=c++11 -c distzmatrix.cc -o distzmatrix.o
> > In file included from algo.cc:27:0:
> > ../../../src/util/math/algo.h: In function 'decltype (((* p) * (* q))) bagel::blas::{anonymous}::dot_product(T, size_t, U)':
> > ../../../src/util/math/algo.h:151:12: error: 'inner_product' is not a member of 'std'
> >      return std::inner_product(p, p+n, q, static_cast<ResultType>(0.0), std::plus<ResultType>(), [](decltype(*p) i, decltype(*q) j) { return detail::conj(i)*j; });
> >             ^

Thanks, I've cherry-picked a fix from upstream to subversion which fixes
this.  Will upload when I've verified the rest of the package still
builds as well.


Michael


From owner at bugs.debian.org  Tue May  3 23:51:07 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Tue, 03 May 2016 23:51:07 +0000
Subject: [Debichem-devel] Processed: Re: Bug#822501: bagel: FTBFS: error:
 'inner_product' is not a member of 'std'
References: <20160503234600.GZ4872@nighthawk.caipicrew.dd-dns.de>
Message-ID: <handler.s.C.146231921120564.transcript@bugs.debian.org>

Processing commands for control at bugs.debian.org:

> tags 822501 +pending
Bug #822501 [bagel] bagel: FTBFS: error: 'inner_product' is not a member of 'std'
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
822501: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=822501
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems


From ftpmaster at ftp-master.debian.org  Wed May  4 13:55:04 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Wed, 04 May 2016 13:55:04 +0000
Subject: [Debichem-devel] Processing of
	bagel_0.0~git20150902-2_source.changes
Message-ID: <E1axxGa-0003HA-Id@franck.debian.org>

bagel_0.0~git20150902-2_source.changes uploaded successfully to localhost
along with the files:
  bagel_0.0~git20150902-2.dsc
  bagel_0.0~git20150902-2.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Wed May  4 19:21:31 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Wed, 04 May 2016 19:21:31 +0000
Subject: [Debichem-devel] bagel_0.0~git20150902-2_source.changes ACCEPTED
	into unstable
Message-ID: <E1ay2MV-00038Q-6W@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Wed, 04 May 2016 15:50:47 +0200
Source: bagel
Binary: bagel bagel-data
Architecture: source
Version: 0.0~git20150902-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 bagel      - Computational Chemistry Package
 bagel-data - Computational Chemistry Package (data files)
Closes: 822501
Changes:
 bagel (0.0~git20150902-2) unstable; urgency=medium
 .
   * debian/patches/add_missing_includes.patch: New patch, fixes a build
     failure, partly taken from upstream commit 8baa3058 (Closes: #822501).
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Thank you for your contribution to Debian.


From owner at bugs.debian.org  Wed May  4 19:24:18 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Wed, 04 May 2016 19:24:18 +0000
Subject: [Debichem-devel] Bug#822501: marked as done (bagel: FTBFS: error:
 'inner_product' is not a member of 'std')
References: <E1ay2MV-00038c-Cm@franck.debian.org>
 <20160425011610.GF8599@jirafa.cyrius.com>
Message-ID: <handler.822501.D822501.146238969426099.ackdone@bugs.debian.org>

Your message dated Wed, 04 May 2016 19:21:31 +0000
with message-id <E1ay2MV-00038c-Cm at franck.debian.org>
and subject line Bug#822501: fixed in bagel 0.0~git20150902-2
has caused the Debian Bug report #822501,
regarding bagel: FTBFS: error: 'inner_product' is not a member of 'std'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner at bugs.debian.org
immediately.)


-- 
822501: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=822501
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems
-------------- next part --------------
An embedded message was scrubbed...
From: Martin Michlmayr <tbm at hpe.com>
Subject: bagel: FTBFS: error: 'inner_product' is not a member of 'std'
Date: Sun, 24 Apr 2016 18:16:10 -0700
Size: 5539
URL: <http://lists.alioth.debian.org/pipermail/debichem-devel/attachments/20160504/255c009b/attachment.mht>
-------------- next part --------------
An embedded message was scrubbed...
From: Michael Banck <mbanck at debian.org>
Subject: Bug#822501: fixed in bagel 0.0~git20150902-2
Date: Wed, 04 May 2016 19:21:31 +0000
Size: 5027
URL: <http://lists.alioth.debian.org/pipermail/debichem-devel/attachments/20160504/255c009b/attachment-0001.mht>

From noreply at release.debian.org  Thu May  5 16:39:12 2016
From: noreply at release.debian.org (Debian testing watch)
Date: Thu, 05 May 2016 16:39:12 +0000
Subject: [Debichem-devel] openms REMOVED from testing
Message-ID: <E1ayMIy-0004t8-CD@franck.debian.org>

FYI: The status of the openms source package
in Debian's testing distribution has changed.

  Previous version: 2.0.0-4
  Current version:  (not in testing)
  Hint: <https://release.debian.org/britney/hints/auto-removals>
    # 822412,816562

The script that generates this mail tries to extract removal
reasons from comments in the britney hint files. Those comments
were not originally meant to be machine readable, so if the
reason for removing your package seems to be nonsense, it is
probably the reporting script that got confused. Please check the
actual hints file before you complain about meaningless removals.

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.


From ftpmaster at ftp-master.debian.org  Sat May  7 14:20:20 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 07 May 2016 14:20:20 +0000
Subject: [Debichem-devel] Processing of elpa_2015.05.001-8_source.changes
Message-ID: <E1az35h-0008TQ-01@franck.debian.org>

elpa_2015.05.001-8_source.changes uploaded successfully to localhost
along with the files:
  elpa_2015.05.001-8.dsc
  elpa_2015.05.001-8.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sat May  7 15:50:08 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 07 May 2016 15:50:08 +0000
Subject: [Debichem-devel] elpa_2015.05.001-8_source.changes ACCEPTED into
	unstable
Message-ID: <E1az4Ua-0008Hj-C9@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sat, 07 May 2016 16:14:20 +0200
Source: elpa
Binary: libelpa3 libelpa-dev
Architecture: source
Version: 2015.05.001-8
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Graham Inggs <ginggs at debian.org>
Description:
 libelpa-dev - Eigenvalue SoLvers for Petaflop-Applications (Development version
 libelpa3   - Eigenvalue SoLvers for Petaflop-Applications
Closes: 816590
Changes:
 elpa (2015.05.001-8) unstable; urgency=medium
 .
   * debian/rules (MPIEXEC): Set to one process on mipsel and powerpc.
     (Closes: #816590)
   * debian/rules (ELPA_TEST_SCALE): Set to 200 on mips, mipsel and powerpc.
   * debian/rules (OMPI_MCA): Replace obsolete orte_rsh_agent with plm_rsh_agent.
   * debian/control: Use secure URI for Vcs-Browser.
   * debian/control: Bump Standards-Version to 3.9.8, no further changes.
   * debian/control: Update my email address.
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Thank you for your contribution to Debian.


From owner at bugs.debian.org  Sat May  7 15:51:08 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Sat, 07 May 2016 15:51:08 +0000
Subject: [Debichem-devel] Bug#816590: marked as done (elpa: still FTBFS on
	mipsel/powerpc)
References: <E1az4Ua-0008Ht-DY@franck.debian.org>
 <145699624179.5319.2313639030463104080.reportbug@tatooine>
Message-ID: <handler.816590.D816590.14626362094458.ackdone@bugs.debian.org>

Your message dated Sat, 07 May 2016 15:50:08 +0000
with message-id <E1az4Ua-0008Ht-DY at franck.debian.org>
and subject line Bug#816590: fixed in elpa 2015.05.001-8
has caused the Debian Bug report #816590,
regarding elpa: still FTBFS on mipsel/powerpc
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner at bugs.debian.org
immediately.)


-- 
816590: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=816590
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems
-------------- next part --------------
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Subject: elpa: still FTBFS on mipsel/powerpc
Date: Thu, 03 Mar 2016 10:10:41 +0100
Size: 3789
URL: <http://lists.alioth.debian.org/pipermail/debichem-devel/attachments/20160507/bfe65ad9/attachment.mht>
-------------- next part --------------
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From: Graham Inggs <ginggs at debian.org>
Subject: Bug#816590: fixed in elpa 2015.05.001-8
Date: Sat, 07 May 2016 15:50:08 +0000
Size: 5275
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From ftpmaster at ftp-master.debian.org  Sat May  7 19:31:31 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 07 May 2016 19:31:31 +0000
Subject: [Debichem-devel] Processing of
	bagel_0.0~git20150902-3_source.changes
Message-ID: <E1az7wq-000298-0b@franck.debian.org>

bagel_0.0~git20150902-3_source.changes uploaded successfully to localhost
along with the files:
  bagel_0.0~git20150902-3.dsc
  bagel_0.0~git20150902-3.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sat May  7 19:33:36 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 07 May 2016 19:33:36 +0000
Subject: [Debichem-devel] bagel_0.0~git20150902-3_source.changes ACCEPTED
	into unstable
Message-ID: <E1az7yq-0002bn-C2@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sat, 07 May 2016 21:26:20 +0200
Source: bagel
Binary: bagel bagel-data
Architecture: source
Version: 0.0~git20150902-3
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Graham Inggs <ginggs at debian.org>
Description:
 bagel      - Computational Chemistry Package
 bagel-data - Computational Chemistry Package (data files)
Changes:
 bagel (0.0~git20150902-3) unstable; urgency=medium
 .
   * debian/rules (dh): Disable parallel builds for buildds with limited RAM.
   * debian/rules (dh): Do not build --with autotools-dev.
   * debian/control (Build-Depends): Drop dependency on autotools-dev.
   * debian/compat: Bump debhelper compatibility level to 9.
   * debian/control (Build-Depends): Bump dependency on debhelper to >= 9.
   * debian/control: Add myself to uploaders.
   * debian/control: Use secure URI for Vcs-Browser.
   * debian/copyright: Minor changes to make Lintian happy.
   * debian/control: Bump Standards-Version to 3.9.8, no further changes.
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Thank you for your contribution to Debian.


From owner at bugs.debian.org  Sat May  7 22:30:11 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Sat, 07 May 2016 22:30:11 +0000
Subject: [Debichem-devel] Processed: retitle 815348 to nwchem: FTBFS on
 s390x: testsuite timeout
References: <1462660040-612-bts-mbanck@debian.org>
Message-ID: <handler.s.C.146266009321265.transcript@bugs.debian.org>

Processing commands for control at bugs.debian.org:

> retitle 815348 nwchem: FTBFS on s390x: testsuite timeout
Bug #815348 [src:nwchem] nwchem: FTBFS on mips, s390x: testsuite timeout
Changed Bug title to 'nwchem: FTBFS on s390x: testsuite timeout' from 'nwchem: FTBFS on mips, s390x: testsuite timeout'.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
815348: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=815348
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems


From ftpmaster at ftp-master.debian.org  Sun May  8 11:00:12 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 08 May 2016 11:00:12 +0000
Subject: [Debichem-devel] Processing of
	bagel_0.0~git20160507-1_source.changes
Message-ID: <E1azMRY-0007jH-4Z@franck.debian.org>

bagel_0.0~git20160507-1_source.changes uploaded successfully to localhost
along with the files:
  bagel_0.0~git20160507-1.dsc
  bagel_0.0~git20160507.orig.tar.gz
  bagel_0.0~git20160507-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May  8 11:18:54 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 08 May 2016 11:18:54 +0000
Subject: [Debichem-devel] bagel_0.0~git20160507-1_source.changes ACCEPTED
	into unstable
Message-ID: <E1azMje-0001En-7F@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 08 May 2016 12:23:34 +0200
Source: bagel
Binary: bagel bagel-data
Architecture: source
Version: 0.0~git20160507-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 bagel      - Computational Chemistry Package
 bagel-data - Computational Chemistry Package (data files)
Changes:
 bagel (0.0~git20160507-1) unstable; urgency=medium
 .
   * New upstream development snapshot.  New features include:
     + Extended multistate CASPT2 (XMS-CASPT2) energies and gradients.
   * debian/patches/skip_mrci.patch: Refreshed.
   * debian/patches/disable_large_integral_file.patch: Likewise.
   * debian/patches/add_missing_includes.patch: Updated.
   * debian/patches/skip_failing_testcases.patch: Updated and added one more
     test.
   * debian/patches/install_all_basis_sets.patch: New patch, add previously
     missing basis set files to Makefile.am.
   * debian/rules (override_dh_auto_configure): Add --disable-scalapack to
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   * debian/copyright: Changed base license from LGPL-3 to GPL-3.
   * debian/control (Description): Added XMS-CASPT2 and FCI to capabilities.
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Sun May  8 17:57:18 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 08 May 2016 17:57:18 +0000
Subject: [Debichem-devel] Processing of libint2_2.1.0-1_source.changes
Message-ID: <E1azSxC-0002yh-Th@franck.debian.org>

libint2_2.1.0-1_source.changes uploaded successfully to localhost
along with the files:
  libint2_2.1.0-1.dsc
  libint2_2.1.0.orig.tar.gz
  libint2_2.1.0-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May  8 18:04:42 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 08 May 2016 18:04:42 +0000
Subject: [Debichem-devel] libint2_2.1.0-1_source.changes ACCEPTED into
	unstable
Message-ID: <E1azT4M-0003yu-Ql@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 08 May 2016 19:47:23 +0200
Source: libint2
Binary: libint2-2 libint2-dev
Architecture: source
Version: 2.1.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 libint2-2  - Computation Chemistry Integral Evaluation Library
 libint2-dev - Computation Chemistry Integral Evaluation Library (development fi
Changes:
 libint2 (2.1.0-1) unstable; urgency=medium
 .
   * New upstream release.
   * debian/rules (override_dh_auto_configure): Enabled eri, eri2, eri3 and g12
     options in configure.
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Sun May  8 18:57:40 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 08 May 2016 18:57:40 +0000
Subject: [Debichem-devel] Processing of
	bagel_0.0~git20160507-2_source.changes
Message-ID: <E1azTtc-0002x3-TE@franck.debian.org>

bagel_0.0~git20160507-2_source.changes uploaded successfully to localhost
along with the files:
  bagel_0.0~git20160507-2.dsc
  bagel_0.0~git20160507-2.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May  8 19:04:35 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 08 May 2016 19:04:35 +0000
Subject: [Debichem-devel] bagel_0.0~git20160507-2_source.changes ACCEPTED
	into unstable
Message-ID: <E1azU0J-0003oK-76@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 08 May 2016 20:55:18 +0200
Source: bagel
Binary: bagel bagel-data
Architecture: source
Version: 0.0~git20160507-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 bagel      - Computational Chemistry Package
 bagel-data - Computational Chemistry Package (data files)
Changes:
 bagel (0.0~git20160507-2) unstable; urgency=medium
 .
   * debian/patches/skip_failing_testcases.patch: Readd hunk accidently removed
     in the previous upload.
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Thank you for your contribution to Debian.


From lamby at debian.org  Mon May  9 08:45:23 2016
From: lamby at debian.org (Chris Lamb)
Date: Mon, 09 May 2016 09:45:23 +0100
Subject: [Debichem-devel] Bug#823803: libint2: FTBFS: build_libint.cc:34:34:
	fatal error: boost/preprocessor.hpp: No such file or directory
Message-ID: <1462783523.184592.602060073.23C7F639@webmail.messagingengine.com>

Source: libint2
Version: 2.1.0-1
Severity: serious
Justification: fails to build from source
User: reproducible-builds at lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-builds at lists.alioth.debian.org

Dear Maintainer,

libint2 fails to build from source in unstable/amd64:

  [..]

  dh_testdir
  dh_testroot
  dh_prep
  dh_testdir
  dh_testroot
  dh_install
  dh_installdocs
  dh_installchangelogs
  dh_compress
  dh_fixperms
  dh_installdeb
  dh_gencontrol
  dh_md5sums
  dh_builddeb
  dpkg-deb: building package 'libint2-build-deps' in '../libint2-build-deps_2.1.0-1_all.deb'.
  
  The package has been created.
  Attention, the package has been created in the current directory,
  not in ".." as indicated by the message above!
  Selecting previously unselected package libint2-build-deps.
  (Reading database ... 23072 files and directories currently installed.)
  Preparing to unpack libint2-build-deps_2.1.0-1_all.deb ...
  Unpacking libint2-build-deps (2.1.0-1) ...
  Reading package lists...
  Building dependency tree...
  Reading state information...
  0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
  1 not fully installed or removed.
  After this operation, 0 B of additional disk space will be used.
  Setting up libint2-build-deps (2.1.0-1) ...
   dpkg-buildpackage -rfakeroot -D -us -uc -b
  dpkg-buildpackage: info: source package libint2
  dpkg-buildpackage: info: source version 2.1.0-1
  dpkg-buildpackage: info: source distribution unstable
  dpkg-buildpackage: info: source changed by Michael Banck <mbanck at debian.org>
   dpkg-source --before-build libint2-2.1.0
  dpkg-buildpackage: info: host architecture amd64
   fakeroot debian/rules clean
  dh clean
     dh_testdir
     debian/rules override_dh_auto_clean
  make[1]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
  dh_auto_clean
  	make -j1 distclean
  make[2]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
  for dir in src tests/eri tests/hartree-fock doc tests/eri tests/hartree-fock; \
    do \
      (cd ${dir} && make "DODEPEND=no" distclean) || exit 1; \
    done
  make[3]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src'
  for dir in bin lib; \
    do \
      (cd ${dir} && make  distclean) || exit 1; \
    done
  make[4]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin'
  for dir in libint test_eri profile; \
    do \
      (cd ${dir} && make  distclean) || exit 1; \
    done
  make[5]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint'
  rm -f *.o
  rm -f libINT.a test build_libint
  rm -f *.d
  rm -f *.dot
  make[5]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint'
  make[5]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/test_eri'
  rm -rf generate_eri_code test_eri time_eri test_eri_rys *.o *.d *.dot *.log
  rm -rf Make.compute_eri libint2_init.cc libint2_static_init.cc libint2_static_cleanup.cc  libint2_init.o libint2_static_init.o libint2_static_cleanup.o test_eri_conf.h libint2_types.h libint2_params.h libint2_iface.h libint2_iface_internal.h libint2_init.h libint2_static_init.h libint2_static_cleanup.h 
  rm -rf run_time_eri.pl run_timing_suite.pl stdtests.pl test_eri.pl time_eri.pl
  make[5]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/test_eri'
  make[5]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/profile'
  rm -rf generate_t0g12_code profile_Gm *.o *.d
  rm -rf *.dot *.log
  make[5]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/profile'
  rm -rf MakeVars
  make[4]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin'
  make[4]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/lib'
  for dir in libint; \
    do \
      (cd ${dir} && make  distclean) || exit 1; \
    done
  make[5]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/lib/libint'
  make[5]: Nothing to be done for 'distclean'.
  make[5]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/lib/libint'
  rm -rf MakeRules MakeVars
  make[4]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/lib'
  rm -rf libintdirlist.h
  make[3]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src'
  make[3]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/eri'
  rm -rf test *.o *.d
  make[3]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/eri'
  make[3]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock'
  gunzip -c /home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock/../../external/boost.tar.gz | tar -xf - -C ../../include/libint2
  rm -rf hartree-fock hartree-fock++ *.o *.d
  rm -rf ../../include/libint2/boost
  make[3]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock'
  make[3]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/doc'
  for dir in classdoc progman; \
    do \
      (cd ${dir} && make  distclean) || exit 1; \
    done
  make[4]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/doc/classdoc'
  rm -rf html
  rm -rf doxygen.cfg
  make[4]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/doc/classdoc'
  make[4]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/doc/progman'
  rm -f macros.tex
  make[4]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/doc/progman'
  rm -f MakeRules MakeVars
  make[3]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/doc'
  make[3]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/eri'
  M -c -I../../include -I../../include/libint2 -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/eri/../../src/bin/libint -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/eri/../../src/bin/test_eri -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/eri/../../src/lib/libint -I../../src/bin/libint  test.cc | sed 's/^test.o/test.o test.d/g' > test.d
  /bin/sh: 1: M: not found
  rm -rf test *.o *.d
  make[3]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/eri'
  make[3]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock'
  gunzip -c /home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock/../../external/boost.tar.gz | tar -xf - -C ../../include/libint2
  M -c -I../../include -I../../include/libint2 -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock/../../src/lib/libint -DSRCDATADIR=\"/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock/../../lib/basis\"  hartree-fock++.cc | sed 's/^hartree-fock++.o/hartree-fock++.o hartree-fock++.d/g' > hartree-fock++.d
  /bin/sh: 1: M: not found
  M -c -I../../include -I../../include/libint2 -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock/../../src/lib/libint -DSRCDATADIR=\"/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock/../../lib/basis\"  hartree-fock.cc | sed 's/^hartree-fock.o/hartree-fock.o hartree-fock.d/g' > hartree-fock.d
  /bin/sh: 1: M: not found
  gunzip -c /home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock/../../external/boost.tar.gz | tar -xf - -C ../../include/libint2
  rm -rf hartree-fock hartree-fock++ *.o *.d
  rm -rf ../../include/libint2/boost
  make[3]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/tests/hartree-fock'
  rm -rf autom4te.cache config.status config.log conf*.file conf*.dir *.dSYM depcheck* libtool \
  Makedirlist libint2.pc include/libint2
  test -f libint2.pc.in || rm -rf include/libint2
  make[2]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
  rm -fr tests/eri/.libs
  rm -f include/libint2/basis.h
  make[1]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
     dh_clean
   debian/rules build
  dh build
     dh_testdir
     dh_update_autotools_config
     debian/rules override_dh_auto_configure
  make[1]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
  dh_auto_configure -- 		\
  	--with-build-id=''	\
  	--enable-shared		\
  	--enable-eri=yes	\
  	--enable-eri2=yes	\
  	--enable-eri3=yes	\
  	--enable-g12=yes
  make[1]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
     dh_auto_build
  	make -j1
  make[1]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
  for dir in src; \
    do \
      (cd ${dir} && make ) || exit 1; \
    done
  make[2]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src'
  for dir in bin lib; \
    do \
      (cd ${dir} && make ) || exit 1; \
    done
  make[3]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin'
  for dir in libint; \
    do \
      (cd ${dir} && make ) || exit 1; \
    done
  make[4]: Entering directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint'
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint test.cc | sed 's/^test.o/test.o test.d/g' > test.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint build_libint.cc | sed 's/^build_libint.o/build_libint.o build_libint.d/g' > build_libint.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint comp_xyz.cc | sed 's/^comp_xyz.o/comp_xyz.o comp_xyz.d/g' > comp_xyz.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint comp_deriv_gauss.cc | sed 's/^comp_deriv_gauss.o/comp_deriv_gauss.o comp_deriv_gauss.d/g' > comp_deriv_gauss.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint buildtest.cc | sed 's/^buildtest.o/buildtest.o buildtest.d/g' > buildtest.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint purgeable.cc | sed 's/^purgeable.o/purgeable.o purgeable.d/g' > purgeable.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint util.cc | sed 's/^util.o/util.o util.d/g' > util.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint extract.cc | sed 's/^extract.o/extract.o extract.d/g' > extract.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint task.cc | sed 's/^task.o/task.o task.d/g' > task.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint drtree.cc | sed 's/^drtree.o/drtree.o drtree.d/g' > drtree.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint graph_registry.cc | sed 's/^graph_registry.o/graph_registry.o graph_registry.d/g' > graph_registry.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint algebra.cc | sed 's/^algebra.o/algebra.o algebra.d/g' > algebra.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint class_registry.cc | sed 's/^class_registry.o/class_registry.o class_registry.d/g' > class_registry.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint iface.cc | sed 's/^iface.o/iface.o iface.d/g' > iface.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint code.cc | sed 's/^code.o/code.o code.d/g' > code.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint dims.cc | sed 's/^dims.o/dims.o dims.d/g' > dims.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint codeblock.cc | sed 's/^codeblock.o/codeblock.o codeblock.d/g' > codeblock.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint tactic.cc | sed 's/^tactic.o/tactic.o tactic.d/g' > tactic.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint memory.cc | sed 's/^memory.o/memory.o memory.d/g' > memory.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint context.cc | sed 's/^context.o/context.o context.d/g' > context.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint prefactors.cc | sed 's/^prefactors.o/prefactors.o prefactors.d/g' > prefactors.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint flop.cc | sed 's/^flop.o/flop.o flop.d/g' > flop.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint policy_spec.cc | sed 's/^policy_spec.o/policy_spec.o policy_spec.d/g' > policy_spec.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint strategy.cc | sed 's/^strategy.o/strategy.o strategy.d/g' > strategy.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint policy.cc | sed 's/^policy.o/policy.o policy.d/g' > policy.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint iter.cc | sed 's/^iter.o/iter.o iter.d/g' > iter.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint oper.cc | sed 's/^oper.o/oper.o oper.d/g' > oper.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint gauss.cc | sed 's/^gauss.o/gauss.o gauss.d/g' > gauss.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint dgarc.cc | sed 's/^dgarc.o/dgarc.o dgarc.d/g' > dgarc.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint dgvertex.cc | sed 's/^dgvertex.o/dgvertex.o dgvertex.d/g' > dgvertex.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint dg.cc | sed 's/^dg.o/dg.o dg.d/g' > dg.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint rr.cc | sed 's/^rr.o/rr.o rr.d/g' > rr.d
  /bin/sh: 1: M: not found
  M -c  -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint default_params.cc | sed 's/^default_params.o/default_params.o default_params.d/g' > default_params.d
  /bin/sh: 1: M: not found
  g++ -I. -I/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint   -c -o build_libint.o build_libint.cc
  build_libint.cc:34:34: fatal error: boost/preprocessor.hpp: No such file or directory
  compilation terminated.
  <builtin>: recipe for target 'build_libint.o' failed
  make[4]: *** [build_libint.o] Error 1
  make[4]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin/libint'
  Makefile:12: recipe for target 'default' failed
  make[3]: *** [default] Error 1
  make[3]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src/bin'
  Makefile:11: recipe for target 'default' failed
  make[2]: *** [default] Error 1
  make[2]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0/src'
  Makefile:15: recipe for target 'default' failed
  make[1]: *** [default] Error 1
  make[1]: Leaving directory '/home/lamby/temp/cdt.20160509094424.Pspk4sElY1.libint2/libint2-2.1.0'
  dh_auto_build: make -j1 returned exit code 2
  debian/rules:7: recipe for target 'build' failed
  make: *** [build] Error 2

  [..]

The full build log is attached.


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby at debian.org / chris-lamb.co.uk
       `-
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From dparsons at debian.org  Tue May 10 03:00:28 2016
From: dparsons at debian.org (Drew Parsons)
Date: Tue, 10 May 2016 11:00:28 +0800
Subject: [Debichem-devel] Bug#823890: python-openbabel: doc-base error:
	openbabel and pybel already define html format
Message-ID: <146284922897.6634.7640792031642106345.reportbug@schumann.anu.edu.au>

Package: python-openbabel
Version: 2.3.2+dfsg-2.2+b1
Severity: normal

Whenever a doc-base update is triggered (by any package), the
following error is thrown:

Processing triggers for doc-base (0.10.7) ...
Processing 2 changed doc-base files, 2 added doc-base files...
Error while merging /usr/share/doc-base/python-openbabel-openbabel with /usr/share/doc-base/python-openbabel-pybel: format html already defined.

The two files
  /usr/share/doc-base/python-openbabel-openbabel 
  /usr/share/doc-base/python-openbabel-pybel 
both come from python-openbabel.  

Apparently some field is not correct in these files.


-- System Information:
Debian Release: stretch/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.5.0-2-amd64 (SMP w/8 CPU cores)
Locale: LANG=en_AU.utf8, LC_CTYPE=en_AU.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages python-openbabel depends on:
ii  libc6            2.22-7
ii  libgcc1          1:6.1.1-1
ii  libopenbabel4v5  2.3.2+dfsg-2.2+b1
ii  libstdc++6       6.1.1-1
ii  python           2.7.11-1

python-openbabel recommends no packages.

python-openbabel suggests no packages.

-- no debconf information


From noreply at release.debian.org  Fri May 13 16:39:07 2016
From: noreply at release.debian.org (Debian testing watch)
Date: Fri, 13 May 2016 16:39:07 +0000
Subject: [Debichem-devel] elpa 2015.05.001-8 MIGRATED to testing
Message-ID: <E1b1G7H-0002Pn-8n@franck.debian.org>

FYI: The status of the elpa source package
in Debian's testing distribution has changed.

  Previous version: (not in testing)
  Current version:  2015.05.001-8

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.


From plugwash at p10link.net  Fri May 13 23:23:26 2016
From: plugwash at p10link.net (peter green)
Date: Sat, 14 May 2016 00:23:26 +0100
Subject: [Debichem-devel] Bug#818432: espresso: FTBFS on armel: hangs during
	the build
Message-ID: <573661EE.4050505@p10link.net>

My guess would be that the testsuite is just extremely slow on armel 
(which uses software floating point).

Would it be possible to disable longer-running tests or is the testsuite 
an all-or-nothing thing?


From noreply at release.debian.org  Sat May 14 16:39:10 2016
From: noreply at release.debian.org (Debian testing watch)
Date: Sat, 14 May 2016 16:39:10 +0000
Subject: [Debichem-devel] bagel 0.0~git20160507-2 MIGRATED to testing
Message-ID: <E1b1cas-00060J-O9@franck.debian.org>

FYI: The status of the bagel source package
in Debian's testing distribution has changed.

  Previous version: 0.0~git20150902-1
  Current version:  0.0~git20160507-2

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.


From ftpmaster at ftp-master.debian.org  Tue May 17 13:19:04 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Tue, 17 May 2016 13:19:04 +0000
Subject: [Debichem-devel] Processing of
	gpaw-setups_0.9.20000-1_source.changes
Message-ID: <E1b2ets-0002O8-4M@franck.debian.org>

gpaw-setups_0.9.20000-1_source.changes uploaded successfully to localhost
along with the files:
  gpaw-setups_0.9.20000-1.dsc
  gpaw-setups_0.9.20000.orig.tar.gz
  gpaw-setups_0.9.20000-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Tue May 17 13:34:03 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Tue, 17 May 2016 13:34:03 +0000
Subject: [Debichem-devel] gpaw-setups_0.9.20000-1_source.changes ACCEPTED
	into unstable
Message-ID: <E1b2f8N-0005HJ-2F@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Tue, 17 May 2016 13:53:16 +0200
Source: gpaw-setups
Binary: gpaw-data
Architecture: source
Version: 0.9.20000-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Graham Inggs <ginggs at debian.org>
Description:
 gpaw-data  - gpaw datasets/setups
Changes:
 gpaw-setups (0.9.20000-1) unstable; urgency=medium
 .
   * New upstream release.
   * Use secure URI for Vcs-Git field.
   * Update debian/copyright.
   * Override package-contains-timestamped-gzip Lintian warnings.
   * Bump Standards-Version to 3.9.8, no further changes.
Checksums-Sha1:
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 e52b91cf91a9a8f04d04e4dab72275876ba39abf 52648851 gpaw-setups_0.9.20000.orig.tar.gz
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Checksums-Sha256:
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 6c71682be12a41e17909f65fd7c1a2e4a6a7becb63fbeed2f0f3a1616d6fd41f 52648851 gpaw-setups_0.9.20000.orig.tar.gz
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 2a1df1e8a51a273385503e97460c0865 52648851 science optional gpaw-setups_0.9.20000.orig.tar.gz
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Thank you for your contribution to Debian.


From pado at passoire.fr  Wed May 18 13:19:05 2016
From: pado at passoire.fr (Alexis =?UTF-8?Q?Bienven=C3=BCe?=)
Date: Wed, 18 May 2016 15:19:05 +0200
Subject: [Debichem-devel] Bug#824653: elkcode: please make the build
	reproducible (environment)
Message-ID: <573C6BC9.8040107@passoire.fr>

Source: elkcode
Version: 2.3.22-1
Severity: wishlist
Tags: patch upstream
User: reproducible-builds at lists.alioth.debian.org
Usertags: environment
X-Debbugs-Cc: reproducible-builds at lists.alioth.debian.org

Dear Maintainer,

While working on the ?reproducible builds? effort [1], we have noticed
that 'elkcode' could not be built reproducibly.

The attached patch fixes the locale used by ls to sort files.
Once applied, elkcode can be built reproducibly in our current
experimental framework.

Regards,
Alexis Bienven?e.

 [1]: https://wiki.debian.org/ReproducibleBuilds







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From noreply at release.debian.org  Mon May 23 16:39:08 2016
From: noreply at release.debian.org (Debian testing watch)
Date: Mon, 23 May 2016 16:39:08 +0000
Subject: [Debichem-devel] gpaw-setups 0.9.20000-1 MIGRATED to testing
Message-ID: <E1b4ssm-0000Es-1h@franck.debian.org>

FYI: The status of the gpaw-setups source package
in Debian's testing distribution has changed.

  Previous version: 0.9.11271-2
  Current version:  0.9.20000-1

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.


From olebole at debian.org  Tue May 24 11:46:58 2016
From: olebole at debian.org (Ole Streicher)
Date: Tue, 24 May 2016 13:46:58 +0200
Subject: [Debichem-devel] Bug#825181: Please which tasks should be installed
	at a default installation of the blend
Message-ID: <57443F32.4070702@debian.org>

Package: src:debichem
Severity: wishlist
X-Debbugs-Cc: debichem-devel at lists.alioth.debian.org

Dear Debichem maintainers,

in the alpha-6 release of the Debian installer, a preliminary way was
introduced to install a default package selection for each Debian Pure
Blend:

https://lists.debian.org/debian-devel-announce/2016/05/msg00004.html

To get this alive, it is needed to define which tasks shall be included
into the package selection. The easiest way here is to put a keyword

Install: true

into the headers of all tasks which should be installed by default if
the debichem blend is selected. If this is unsuitable for your blend,
you may also directly edit the Debichem section
"debian-blends-tasks.desc" of the "blends" package source (or send me a
patch so that I can do it).

https://anonscm.debian.org/cgit/blends/blends.git

Note that in the current implementation only one checkbox per Blend is
foreseen. Personally, I believe this is the best compromise we can get
here. Please join the discussion in the Debian-Blends mailing list if
you have other opinions here.

https://lists.debian.org/debian-blends/2016/05/msg00047.html

The bug containing the discussion about the implementation:

https://bugs.debian.org/758116

If you think that you don't want to be listed by the default Debian
installer, you can just ignore (and close) this bug.

Best regards

Ole


From sebastianwouters at gmail.com  Wed May 25 08:00:46 2016
From: sebastianwouters at gmail.com (Sebastian Wouters)
Date: Wed, 25 May 2016 10:00:46 +0200
Subject: [Debichem-devel] chemps2 v1.7
In-Reply-To: <CAMj5sjz2zTUqC7x=rKEHJxMFKvy9_JfBnv_jZyvr_4wyPgKAFw@mail.gmail.com>
References: <CAMj5sjzGUX2w8Tf6Y9CawC8_qQXtzbK07kOPiXaBmN=aBEucFw@mail.gmail.com>
 <CAMj5sjy-8ijOqBJxBDdXWJFPD320qp_D1OQ4Ont4SB0wL2OF8A@mail.gmail.com>
 <57447004.8000601@debian.org>
 <CAMj5sjz2zTUqC7x=rKEHJxMFKvy9_JfBnv_jZyvr_4wyPgKAFw@mail.gmail.com>
Message-ID: <CAMj5sjxLU9XVEvq9v=OVym9vic+Z7Gft-kFfGKSZDrePp-uBoA@mail.gmail.com>

>
>
> I've downloaded lintian 2.5.44 from
> https://launchpad.net/ubuntu/yakkety/amd64/lintian/2.5.44ubuntu1
> and updated your remarks, except for "no further changes", with which I'm
> not that comfortable:
>
> https://anonscm.debian.org/git/debichem/packages/chemps2.git
>
>
I've also thrown out the OMP_NUM_THREADS=1 option for the tests.
Yesterday the tests ran orders of magnitude slower on my machine with the
g++ compiler than with the icpc compiler for multiple threads. But a reboot
seems to have fixed this problem. I still don't know what caused the long
run times though...
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From ftpmaster at ftp-master.debian.org  Wed May 25 09:22:53 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Wed, 25 May 2016 09:22:53 +0000
Subject: [Debichem-devel] Processing of chemps2_1.7-1_amd64.changes
Message-ID: <E1b5V1h-00075K-Ej@franck.debian.org>

chemps2_1.7-1_amd64.changes uploaded successfully to localhost
along with the files:
  chemps2_1.7-1.dsc
  chemps2_1.7.orig.tar.gz
  chemps2_1.7-1.debian.tar.xz
  chemps2-dbgsym_1.7-1_amd64.deb
  chemps2-doc_1.7-1_all.deb
  chemps2_1.7-1_amd64.deb
  libchemps2-2-dbgsym_1.7-1_amd64.deb
  libchemps2-2_1.7-1_amd64.deb
  libchemps2-dev_1.7-1_amd64.deb
  python-chemps2-dbgsym_1.7-1_amd64.deb
  python-chemps2_1.7-1_amd64.deb

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Wed May 25 10:19:35 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Wed, 25 May 2016 10:19:35 +0000
Subject: [Debichem-devel] chemps2_1.7-1_amd64.changes is NEW
Message-ID: <E1b5VuZ-0002wp-AS@franck.debian.org>

binary:libchemps2-2 is NEW.

Your package has been put into the NEW queue, which requires manual action
from the ftpteam to process. The upload was otherwise valid (it had a good
OpenPGP signature and file hashes are valid), so please be patient.

Packages are routinely processed through to the archive, and do feel
free to browse the NEW queue[1].

If there is an issue with the upload, you will receive an email from a
member of the ftpteam.

If you have any questions, you may reply to this email.

[1]: https://ftp-master.debian.org/new.html


From ftpmaster at ftp-master.debian.org  Thu May 26 10:00:29 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Thu, 26 May 2016 10:00:29 +0000
Subject: [Debichem-devel] chemps2_1.7-1_amd64.changes ACCEPTED into unstable,
	unstable
Message-ID: <E1b5s5d-0000oa-Sr@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Wed, 25 May 2016 10:03:11 +0200
Source: chemps2
Binary: libchemps2-2 libchemps2-dev chemps2-doc chemps2 python-chemps2
Architecture: source amd64 all
Version: 1.7-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Sebastian Wouters <sebastianwouters at gmail.com>
Description:
 chemps2    - Executable to call libchemps2-2 from the command line
 chemps2-doc - Documentation of the libchemps2-2 package
 libchemps2-2 - Spin-adapted DMRG for ab initio quantum chemistry
 libchemps2-dev - C++ headers, static library, and symlink for libchemps2-2
 python-chemps2 - Python 2 interface for libchemps2-2
Changes:
 chemps2 (1.7-1) unstable; urgency=medium
 .
    * Upstream release v1.7
    * Bump SO version to libchemps2.so.2
    * Package no longer depends on GSL
    * Update symbols file
    * New package description for added features
    * Bump Standards-Version to 3.9.8
    * Fix unsafe Vcs-* URI
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 c8143fb4d33f432b5cf38cf4b2fba152 103516 doc optional chemps2-doc_1.7-1_all.deb
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Fri May 27 11:47:41 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Fri, 27 May 2016 11:47:41 +0000
Subject: [Debichem-devel] Bug#825409: Removed package(s) from unstable
Message-ID: <E1b6GEv-0001Fx-R9@franck.debian.org>

We believe that the bug you reported is now fixed; the following
package(s) have been removed from unstable:

quantum-espresso | 5.1+dfsg-3 | armel

------------------- Reason -------------------
RoQA; FTBFS, blocks cruft removal
----------------------------------------------

Note that the package(s) have simply been removed from the tag
database and may (or may not) still be in the pool; this is not a bug.
The package(s) will be physically removed automatically when no suite
references them (and in the case of source, when no binary references
it).  Please also remember that the changes have been done on the
master archive and will not propagate to any mirrors until the next
dinstall run at the earliest.

Packages are usually not removed from testing by hand. Testing tracks
unstable and will automatically remove packages which were removed
from unstable when removing them from testing causes no dependency
problems. The release team can force a removal from testing if it is
really needed, please contact them if this should be the case.

Bugs which have been reported against this package are not automatically
removed from the Bug Tracking System.  Please check all open bugs and
close them or re-assign them to another package if the removed package
was superseded by another one.

The version of this package that was in Debian prior to this removal
can still be found using http://snapshot.debian.org/.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 825409 at bugs.debian.org.

The full log for this bug can be viewed at https://bugs.debian.org/825409

This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmaster at ftp-master.debian.org.

Debian distribution maintenance software
pp.
Scott Kitterman (the ftpmaster behind the curtain)


From anbe at debian.org  Fri May 27 11:59:49 2016
From: anbe at debian.org (Andreas Beckmann)
Date: Fri, 27 May 2016 13:59:49 +0200
Subject: [Debichem-devel] Bug#818432: espresso: FTBFS on armel: hangs during
	the build
Message-ID: <20160527115949.20939.42087.reportbug@zam581.zam.kfa-juelich.de>

Followup-For: Bug #818432
Control: severity -1 normal

I just had espresso decrufted to remove the outdated armel build, thus
downgrading the severity.


Andreas


From owner at bugs.debian.org  Fri May 27 12:03:04 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Fri, 27 May 2016 12:03:04 +0000
Subject: [Debichem-devel] Processed: Re: espresso: FTBFS on armel: hangs
	during the build
References: <20160527115949.20939.42087.reportbug@zam581.zam.kfa-juelich.de>
 <145817216404.14055.777951503693030971.reportbug@tatooine>
Message-ID: <handler.s.B818432.146435039525099.transcript@bugs.debian.org>

Processing control commands:

> severity -1 normal
Bug #818432 [src:espresso] espresso: FTBFS on armel: hangs during the build
Severity set to 'normal' from 'serious'

-- 
818432: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=818432
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems


From noreply at release.debian.org  Sat May 28 16:39:10 2016
From: noreply at release.debian.org (Debian testing watch)
Date: Sat, 28 May 2016 16:39:10 +0000
Subject: [Debichem-devel] espresso 5.1+dfsg-4 MIGRATED to testing
Message-ID: <E1b6hGY-0007KQ-QW@franck.debian.org>

FYI: The status of the espresso source package
in Debian's testing distribution has changed.

  Previous version: (not in testing)
  Current version:  5.1+dfsg-4

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.


From ftpmaster at ftp-master.debian.org  Sat May 28 17:55:35 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 28 May 2016 17:55:35 +0000
Subject: [Debichem-devel] Processing of elpa_2016.05.001-1_source.changes
Message-ID: <E1b6iSV-0006gV-HZ@franck.debian.org>

elpa_2016.05.001-1_source.changes uploaded successfully to localhost
along with the files:
  elpa_2016.05.001-1.dsc
  elpa_2016.05.001.orig.tar.gz
  elpa_2016.05.001-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sat May 28 18:31:14 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 28 May 2016 18:31:14 +0000
Subject: [Debichem-devel] elpa_2016.05.001-1_source.changes REJECTED
Message-ID: <E1b6j10-0003BL-Rp@franck.debian.org>



Source-only uploads to NEW are not allowed.

===

Please feel free to respond to this email if you don't understand why
your files were rejected, or if you upload new files which address our
concerns.



From ftpmaster at ftp-master.debian.org  Sat May 28 19:58:43 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 28 May 2016 19:58:43 +0000
Subject: [Debichem-devel] Processing of elpa_2016.05.001-1_amd64.changes
Message-ID: <E1b6kNf-0007kV-Mk@franck.debian.org>

elpa_2016.05.001-1_amd64.changes uploaded successfully to localhost
along with the files:
  elpa_2016.05.001-1.dsc
  elpa_2016.05.001.orig.tar.gz
  elpa_2016.05.001-1.debian.tar.xz
  libelpa-dev_2016.05.001-1_amd64.deb
  libelpa4-dbgsym_2016.05.001-1_amd64.deb
  libelpa4_2016.05.001-1_amd64.deb

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sat May 28 20:03:54 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 28 May 2016 20:03:54 +0000
Subject: [Debichem-devel] Processing of psi4_1.0~rc-1_source.changes
Message-ID: <E1b6kSg-0008O7-3f@franck.debian.org>

psi4_1.0~rc-1_source.changes uploaded successfully to localhost
along with the files:
  psi4_1.0~rc-1.dsc
  psi4_1.0~rc.orig.tar.gz
  psi4_1.0~rc-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sat May 28 22:24:37 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 28 May 2016 22:24:37 +0000
Subject: [Debichem-devel] elpa_2016.05.001-1_amd64.changes is NEW
Message-ID: <E1b6mer-0004cQ-V4@franck.debian.org>

binary:libelpa4 is NEW.

Your package has been put into the NEW queue, which requires manual action
from the ftpteam to process. The upload was otherwise valid (it had a good
OpenPGP signature and file hashes are valid), so please be patient.

Packages are routinely processed through to the archive, and do feel
free to browse the NEW queue[1].

If there is an issue with the upload, you will receive an email from a
member of the ftpteam.

If you have any questions, you may reply to this email.

[1]: https://ftp-master.debian.org/new.html


From ftpmaster at ftp-master.debian.org  Sat May 28 22:47:22 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sat, 28 May 2016 22:47:22 +0000
Subject: [Debichem-devel] psi4_1.0~rc-1_source.changes ACCEPTED into unstable
Message-ID: <E1b6n0s-0007rj-RK@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sat, 28 May 2016 21:53:24 +0200
Source: psi4
Binary: psi4 psi4-data
Architecture: source
Version: 1:1.0~rc-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 psi4       - Quantum Chemical Program Suite
 psi4-data  - Quantum Chemical Program Suite (data files)
Changes:
 psi4 (1:1.0~rc-1) unstable; urgency=medium
 .
   * New upstream release candidate.
   * debian/patches/git_version_fix.patch: Removed, no longer needed.
   * debian/patches/gcc5_compile_error.patch: Likeweise.
   * debian/patches/fix-deprecated-perl-defined.patch: Likewise.
   * debian/control (Description): Update capabilities.
   * debian/patches/chemps_1_7_support.patch: New patch, adds support for
     version 1.7 of chemps2.
   * debian/patches/system_libint.patch: Refreshed and updated.
   * debian/rules (override_dh_auto_install): Update list of samples.
   * debian/control (Build-Depends): Removed libgsl-dev.
   * debian/patches/default_data_directory.patch: New patch, reverts the data
     directory to `/usr/share/psi', from `/usr/share/psi4'.
   * debian/patches/relax_dmrg_caspt2_test.patch: New patch, makes the
     dmrg-caspt2-n2 testcase take less time.
Checksums-Sha1:
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Sun May 29 14:23:03 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 14:23:03 +0000
Subject: [Debichem-devel] Processing of cp2k_3.0.0-1_source.changes
Message-ID: <E1b71cN-00036M-G8@franck.debian.org>

cp2k_3.0.0-1_source.changes uploaded successfully to localhost
along with the files:
  cp2k_3.0.0-1.dsc
  cp2k_3.0.0.orig.tar.bz2
  cp2k_3.0.0-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May 29 14:23:02 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 14:23:02 +0000
Subject: [Debichem-devel] Processing of libxc_3.0.0-1_source.changes
Message-ID: <E1b71cN-00036F-0H@franck.debian.org>

libxc_3.0.0-1_source.changes uploaded successfully to localhost
along with the files:
  libxc_3.0.0-1.dsc
  libxc_3.0.0.orig.tar.gz
  libxc_3.0.0-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May 29 16:36:20 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 16:36:20 +0000
Subject: [Debichem-devel] cp2k_3.0.0-1_source.changes ACCEPTED into unstable
Message-ID: <E1b73hM-0006UN-Gz@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 29 May 2016 16:21:00 +0200
Source: cp2k
Binary: cp2k cp2k-data
Architecture: source
Version: 3.0.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 cp2k       - Ab Initio Molecular Dynamics
 cp2k-data  - Ab Initio Molecular Dynamics (data files)
Changes:
 cp2k (3.0.0-1) unstable; urgency=medium
 .
   * New upstream release, new features include:
     + K-points for GGA DFT
     + Unrestricted MP2 gradients
     + Implicit Poisson solver, with dielectric, and different boundary
       conditions
     + Improvements in the path integral code, including the PIGLET thermostat
     + G0W0 and eigenvalue self-consistent GW
     + Filtered basis method
     + Polarized atomic orbitals
   * debian/patches/testsuite_output.patch: Refreshed.
   * debian/patches/elpa2_support.patch: Removed, no longer needed.
   * debian/patches/data_files_standard_location.patch: Likewise.
   * debian/control (Build-Depends): Bump libelpa-dev dependency to
     2016.05.001-1.
   * debian/patches/makeflags.patch: Update ELPA define to __ELPA3.
   * debian/patches/makeflags.patch: Add /usr/include to include path for
     LibXC's Fortran90 modules.
   * debian/patches/makeflags.patch: Add LibXC's Fortran90 to LIBS.
   * debian/patches/libxc3_support.patch: New patch, conditionalize XC
     functional names according to major version.
   * debian/control (Build-Depends): Bump libxc-dev dependency to
     3.0.0-1.
   * debian/cp2k.examples: Replaced no longer present He-ri.inp example with
     H2O-hfx-1.inp.
   * debian/rules (override_dh_auto_test): Update list of regression test
     directories.
   * debian/regtest.config: Add numprocs=1 to regression tester config.
Checksums-Sha1:
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 3ced79f3f00d369934fba272370d1af9f90f60a5 13184 cp2k_3.0.0-1.debian.tar.xz
Checksums-Sha256:
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Sun May 29 16:44:13 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 16:44:13 +0000
Subject: [Debichem-devel] libxc_3.0.0-1_source.changes REJECTED
Message-ID: <E1b73oz-0007y7-Sx@franck.debian.org>



Source-only uploads to NEW are not allowed.

===

Please feel free to respond to this email if you don't understand why
your files were rejected, or if you upload new files which address our
concerns.



From ftpmaster at ftp-master.debian.org  Sun May 29 17:54:16 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 17:54:16 +0000
Subject: [Debichem-devel] Processing of libxc_3.0.0-1_amd64.changes
Message-ID: <E1b74um-0007MB-L9@franck.debian.org>

libxc_3.0.0-1_amd64.changes uploaded successfully to localhost
along with the files:
  libxc_3.0.0-1.dsc
  libxc_3.0.0.orig.tar.gz
  libxc_3.0.0-1.debian.tar.xz
  libxc-dev_3.0.0-1_amd64.deb
  libxc4-dbgsym_3.0.0-1_amd64.deb
  libxc4_3.0.0-1_amd64.deb

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May 29 18:20:48 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 18:20:48 +0000
Subject: [Debichem-devel] libxc_3.0.0-1_amd64.changes is NEW
Message-ID: <E1b75KS-0002Kn-2C@franck.debian.org>

binary:libxc4 is NEW.

Your package has been put into the NEW queue, which requires manual action
from the ftpteam to process. The upload was otherwise valid (it had a good
OpenPGP signature and file hashes are valid), so please be patient.

Packages are routinely processed through to the archive, and do feel
free to browse the NEW queue[1].

If there is an issue with the upload, you will receive an email from a
member of the ftpteam.

If you have any questions, you may reply to this email.

[1]: https://ftp-master.debian.org/new.html


From ftpmaster at ftp-master.debian.org  Sun May 29 19:31:37 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 19:31:37 +0000
Subject: [Debichem-devel] Processing of psi4_1.0~rc-2_source.changes
Message-ID: <E1b76Qz-0004Gp-FU@franck.debian.org>

psi4_1.0~rc-2_source.changes uploaded successfully to localhost
along with the files:
  psi4_1.0~rc-2.dsc
  psi4_1.0~rc-2.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May 29 19:41:41 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 19:41:41 +0000
Subject: [Debichem-devel] Processing of espresso_5.4.0+dfsg-1_source.changes
Message-ID: <E1b76aj-0005zg-77@franck.debian.org>

espresso_5.4.0+dfsg-1_source.changes uploaded successfully to localhost
along with the files:
  espresso_5.4.0+dfsg-1.dsc
  espresso_5.4.0+dfsg.orig-EPW.tar.gz
  espresso_5.4.0+dfsg.orig-GWW.tar.gz
  espresso_5.4.0+dfsg.orig-NEB.tar.gz
  espresso_5.4.0+dfsg.orig-PHonon.tar.gz
  espresso_5.4.0+dfsg.orig-PWCOND.tar.gz
  espresso_5.4.0+dfsg.orig-PlotPhon.tar.gz
  espresso_5.4.0+dfsg.orig-QHA.tar.gz
  espresso_5.4.0+dfsg.orig-TDDFPT.tar.gz
  espresso_5.4.0+dfsg.orig-XSpectra.tar.gz
  espresso_5.4.0+dfsg.orig-atomic.tar.gz
  espresso_5.4.0+dfsg.orig-test-suite.tar.gz
  espresso_5.4.0+dfsg.orig.tar.gz
  espresso_5.4.0+dfsg-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Sun May 29 19:52:01 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 19:52:01 +0000
Subject: [Debichem-devel] espresso_5.4.0+dfsg-1_source.changes ACCEPTED into
	unstable
Message-ID: <E1b76kj-0006y6-Gp@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 29 May 2016 19:47:06 +0200
Source: espresso
Binary: quantum-espresso quantum-espresso-data
Architecture: source
Version: 5.4.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 quantum-espresso - Electronic-Structure and Ab-Initio Molecular Dynamics Suite
 quantum-espresso-data - Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Docu
Changes:
 espresso (5.4.0+dfsg-1) unstable; urgency=medium
 .
   * New upstream release. New features since 5.1 include:
    + Goedecker-Hutter-Teter pseudopotentials directy supported in analytical
      form
    + Hybrid functionals with reduced cutoff for Vx\psi now work also with
      k-points and for stress calculation
    + Real-space treatment of augmentation charges in USPP and PAW can
      be used in (fixed-cell) structural relaxation as well
    + Hybrid functionals for USPP now working
    + Improved ESM, works also for NEB and with postprocessing codes;
      constant-bias potential (constant-mu) calculations implemented
    + Calculation of Electron Energy Loss and Inelastic X-ray Scattering Spectra
    + X3LYP and B3LYP hybrid functionals
    + Calculation of the Magnetic anisotropy energy is implemented (in the limit
      of small spin-orbit coupling) using the Force theorem
    + Bethe-Salpeter equation added to GWL
    + Phonons with vdw-DF and with DFT-D2
   * debian/patches/testsuite_pseudopotentials.patch: Updated.
   * debian/patches/testsuite_ignore_errors.patch: Removed, no longer needed.
   * debian/patches/testsuite_skip_vdw_tests.patch: Likewise.
   * debian/patches/testsuite_echo_cp_subtests.patch: Likewise.
   * debian/patches/makefile_clean.patch: Updated.
   * debian/patches/pseudopotential_dir.patch: Refreshed.
   * debian/patches/elpa3_support.patch: New patch, adds support for
     ELPA-2015.11 interface.
   * debian/patches/configure_elpa_lib.patch: New patch, overrides ELPA library
     link line.
   * debian/rules (override_dh_auto_test): Updated for new test suite.
   * debian/rules (override_dh_auto_clean): Make failures of dh_auto_clean
     non-fatal.
   * debian/rules (override_dh_auto_configure): New target add support for ELPA
     to configure.
   * debian/control (Build-Depends): Added libelpa-dev.
   * debian/rules (override_dh_auto_clean): Remove python bytecode from new test
     suite.
   * debian/rules (override_dh_auto_clean): Remove configure.h as well.
   * debian/patches/series: Disabled fftw_i386_unaligned.patch for now.
   * debian/patches/install_bindir.patch: New patch, sets /usr/bin as
     installation directory.
   * debian/quantum-espresso.install: Install all binaries to /usr/bin.
   * debian/rules (override_dh_auto_clean): Remove libcg.a as well.
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Sun May 29 19:55:19 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Sun, 29 May 2016 19:55:19 +0000
Subject: [Debichem-devel] psi4_1.0~rc-2_source.changes ACCEPTED into unstable
Message-ID: <E1b76nv-0007VA-Uy@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 29 May 2016 21:28:48 +0200
Source: psi4
Binary: psi4 psi4-data
Architecture: source
Version: 1:1.0~rc-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 psi4       - Quantum Chemical Program Suite
 psi4-data  - Quantum Chemical Program Suite (data files)
Changes:
 psi4 (1:1.0~rc-2) unstable; urgency=medium
 .
   * debian/rules (dh_override_auto_test): Set CTEST_OUTPUT_ON_FAILURE=TRUE.
Checksums-Sha1:
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Checksums-Sha256:
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Files:
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Mon May 30 07:00:24 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Mon, 30 May 2016 07:00:24 +0000
Subject: [Debichem-devel] elpa_2016.05.001-1_amd64.changes ACCEPTED into
	unstable, unstable
Message-ID: <E1b7HBY-0006IX-Q3@franck.debian.org>



Accepted:

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sat, 28 May 2016 19:55:02 +0200
Source: elpa
Binary: libelpa4 libelpa-dev
Architecture: source amd64
Version: 2016.05.001-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 libelpa-dev - Eigenvalue SoLvers for Petaflop-Applications (Development version
 libelpa4   - Eigenvalue SoLvers for Petaflop-Applications
Changes:
 elpa (2016.05.001-1) unstable; urgency=medium
 .
   * New upstream release.
   * debian/patches/testsuite_parameters_from_env.patch: Removed, no longer
     needed.
   * debian/patches/fix_module_dir.patch: Refreshed.
   * debian/patches/testsuite_force_default_parameters.patch: Adjusted for new
     test cases.
   * debian/rules: Replace ELPA_TEST_SCALE with TEST_FLAGS.
   * debian/control (libelpa3): Renamed package to libelpa4, adjust references.
   * debian/libelpa3.install: Renamed to ...
   * debian/libelpa4.install: ... this.
   * debian/libelpa3.symbols: Renamed to ...
   * debian/libelpa4.symbols: ... this.
   * debian/rules (override_dh_autoreconf): Removed, no longer needed.
   * debian/patches/testsuite_custom_mpiexec.patch: Updated.
   * debian/patches/configure_fix_am_conditional.patch: New patch, makes
     HAVE_MPI actually be defined in the Makefile if MPI is used.
   * debian/libelpa4.symbols: Updated.
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Thank you for your contribution to Debian.


From ftpmaster at ftp-master.debian.org  Mon May 30 07:00:30 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Mon, 30 May 2016 07:00:30 +0000
Subject: [Debichem-devel] libxc_3.0.0-1_amd64.changes ACCEPTED into unstable,
	unstable
Message-ID: <E1b7HBe-0006K1-Mk@franck.debian.org>



Accepted:

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Hash: SHA1

Format: 1.8
Date: Sun, 29 May 2016 13:21:17 +0200
Source: libxc
Binary: libxc4 libxc-dev
Architecture: source amd64
Version: 3.0.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Michael Banck <mbanck at debian.org>
Description:
 libxc-dev  - Library of Exchange-Correlation Functionals (development files)
 libxc4     - Library of Exchange-Correlation Functionals
Changes:
 libxc (3.0.0-1) unstable; urgency=medium
 .
   * New upstream release.
   * debian/patches/fix_underlinkage.patch: Removed, no longer needed.
   * debian/patches/fix_static_initialisation.patch: Refreshed.
   * debian/control (libxc1): Renamed package to libxc4, adjust references.
   * debian/libxc1.install: Renamed to ...
   * debian/libxc4.install: ... this.
   * debian/libxc4.symbols: New file.
Checksums-Sha1:
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Thank you for your contribution to Debian.


From mbanck at debian.org  Mon May 30 20:27:56 2016
From: mbanck at debian.org (Michael Banck)
Date: Mon, 30 May 2016 22:27:56 +0200
Subject: [Debichem-devel] Report from 2015 conferences
Message-ID: <20160530202755.GA9804@nighthawk.caipicrew.dd-dns.de>

Hi,

this is a long-delayed report about the conferences I went to last
summer (besides DebConf, organizing which in retrospective burnt me out
quite a bit so I did not get around finishing this report sooner).

0. Debichem Poster

I created a Debichem poster for presentation at EUCO-CC and STC.  That
involved creating a logo, and some research on how to present the
computational chemistry capabilities of Debichem packages (as that was
the main target audience). I plan to commit it to subversion/git at some
point in case somebody is interested in it.

1. CP2K Developer Meeting (Zurich, August 31st)

As a prelude, I was invited to the CP2K developer meeting in Zurich. As
a CP2K workshop was happening at ETH Zurich at the same time, quite a
few CP2K developers were in town so they decided to have a face-to-face
meeting.  Acknowledging the packaging work, they invited Dominik
Mierzejewski from Fedora and me.  I gave a short talk about Debichem and
CP2K[1], and Dominik did the same for Fedora. Several integration issue
were discussed, especially with ELPA. There was also some discussion
about moving the CP2K wiki to a hosted machine and using Letsencrypt
(which has happened since), and about a sting paper against FLOSS ("What
Is the Price of Open-Source Software?") in which CP2K was mentioned and
which was issued by some competing groups[2]. No concrete action has
happened on that so far, though.

2. EUCO-CC (Fulda, August 31st-September 3rd)

Due to the CP2K developer meeting I missed the first day of the 10th
European Conference on Computational Chemistry[3].  I presented a poster
about Debichem[4, 5] on the second day.  I was very pleased with the
amount of feedback, a lot of the passer-bys knew about Debian when I
asked them, and quite a few thanked me for our work.  Most however had
not heard of Debichem before and believed it to be a new product or
something, not a pure blend, so I had a bit of trouble explaining what
exactly it is.  I usually told them that it is collaborate effort to get
high-quality chemistry software into Debian and that all the packages I
mentioned on the poster are available to Debian (and by extension)
Ubuntu users. I also had a chat with a few developers of Free Software
packages about getting their work into Debichem, but nothing has come up
about that so far. Over lunch, I had a conversation with J?rg-R?diger
Hill (upstream of the viewmol package) from Scienomics. They are doing
something similar to Debichem on a commercial basis and are using
largely overlapping packages as plugins for their GUI[6].  I still have
to follow-up with him whether any collaboration would be possible.

3. STC (Potsdam, September 20th-September 24th)

The Symposium on Theoretical Chemistry[7] is more targetted at method
development and fundamental research than EUCO-CC (which is more
application-related).  I presented a slightly updated version of the
Debichem poster[8].  Again, a lot of people who passed by knew about
Debian and said they were using (some of) our packages in their
research, but were mostly unaware of Debichem itself.  I had a longer
discussion with a participant who wrote some code for reaction kinetics
a long time ago and is facing retirement (and thus his code facing
obscurity) now, so was thinking about open sourcing it. It has to be
said that the majority of the talks presenting methods, codes or
algorithms were based on proprietary codebases.

4. Acknowledgements

Travel to Zurich has been paid for by the University of Zurich. Debian
has agreed to cover parts of the registration fee for EUCO-CC. The
University of Kiel has kindly printed the STC2015 version of the
Debichem poster.

[1] http://people.debian.org/~mbanck/debichem_cp2k.pdf

[2] http://pubs.acs.org/doi/abs/10.1021/acs.jpclett.5b01258

[3] http://www.euco-cc-2015.org/

[4] https://people.debian.org/~mbanck/debichem_eucocc2015.pdf

[5] https://twitter.com/mbanck/status/638700342612520960

[6] http://scienomics.com/products/quantum

[7] http://tcb16.chem.uni-potsdam.de/cms/wordpress/

[8] https://people.debian.org/~mbanck/debichem_stc2015.pdf


From owner at bugs.debian.org  Tue May 31 08:06:09 2016
From: owner at bugs.debian.org (Debian Bug Tracking System)
Date: Tue, 31 May 2016 08:06:09 +0000
Subject: [Debichem-devel] Bug#806612: marked as done (cp2k: FTBFS with new
	elpa)
References: <574D456A.5060803@debian.org>
 <E1a34ju-00057Y-Uh@moszumanska.debian.org>
Message-ID: <handler.806612.D806612.146468184331251.ackdone@bugs.debian.org>

Your message dated Tue, 31 May 2016 10:03:54 +0200
with message-id <574D456A.5060803 at debian.org>
and subject line Re: always fails to build with new elpa in unstable
has caused the Debian Bug report #806612,
regarding cp2k: FTBFS with new elpa
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner at bugs.debian.org
immediately.)


-- 
806612: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=806612
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems
-------------- next part --------------
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From: Santiago Vila <sanvila at debian.org>
Subject: cp2k: FTBFS when built with dpkg-buildpackage -A (different version of GNU Fortran)
Date: Sun, 29 Nov 2015 16:22:14 +0000
Size: 6363
URL: <http://lists.alioth.debian.org/pipermail/debichem-devel/attachments/20160531/cf190f1d/attachment.mht>
-------------- next part --------------
An embedded message was scrubbed...
From: Emilio Pozuelo Monfort <pochu at debian.org>
Subject: Re: always fails to build with new elpa in unstable
Date: Tue, 31 May 2016 10:03:54 +0200
Size: 3615
URL: <http://lists.alioth.debian.org/pipermail/debichem-devel/attachments/20160531/cf190f1d/attachment-0001.mht>

From ftpmaster at ftp-master.debian.org  Tue May 31 13:12:09 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Tue, 31 May 2016 13:12:09 +0000
Subject: [Debichem-devel] Processing of python-ase_3.11.0-1_source.changes
Message-ID: <E1b7jSr-0006lY-55@franck.debian.org>

python-ase_3.11.0-1_source.changes uploaded successfully to localhost
along with the files:
  python-ase_3.11.0-1.dsc
  python-ase_3.11.0.orig.tar.gz
  python-ase_3.11.0-1.debian.tar.xz

Greetings,

	Your Debian queue daemon (running on host franck.debian.org)


From ftpmaster at ftp-master.debian.org  Tue May 31 13:21:53 2016
From: ftpmaster at ftp-master.debian.org (Debian FTP Masters)
Date: Tue, 31 May 2016 13:21:53 +0000
Subject: [Debichem-devel] python-ase_3.11.0-1_source.changes ACCEPTED into
	unstable
Message-ID: <E1b7jcH-0007yx-Sg@franck.debian.org>



Accepted:

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Hash: SHA512

Format: 1.8
Date: Tue, 31 May 2016 14:57:32 +0200
Source: python-ase
Binary: python-ase python3-ase python-ase-doc
Architecture: source
Version: 3.11.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Graham Inggs <ginggs at debian.org>
Description:
 python-ase - Atomic Simulation Environment (Python 2)
 python-ase-doc - Atomic Simulation Environment (common documentation)
 python3-ase - Atomic Simulation Environment (Python 3)
Changes:
 python-ase (3.11.0-1) unstable; urgency=medium
 .
   * New upstream release.
   * Update debian/watch for move to GitLab.
   * Drop numpy-1.10-compatibility.patch, included upstream.
   * Use secure URI for Vcs-Git field.
   * Update debian/docs.
   * Documentation is no longer installed by setup.py,
     so use debian/python-ase-doc.install instead.
   * Install PNG instead of XPM icon.
   * Regenerate manpages.
   * Add build dependencies on {python,python3}-scipy,
     bump from Recommends to Depends.
   * Update PYBUILD_TEST_ARGS for new test runner.
   * Bump Standards-Version to 3.9.8, no further changes.
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Thank you for your contribution to Debian.


From pochu at debian.org  Tue May 31 14:33:10 2016
From: pochu at debian.org (Emilio Pozuelo Monfort)
Date: Tue, 31 May 2016 16:33:10 +0200
Subject: [Debichem-devel] Bug#825934: elkcode: FTBFS: undefined reference to
	xc_f90_version_
Message-ID: <146470519010.14830.3909155699141245383.reportbug@tatooine>

Source: elkcode
Version: 2.3.22-1
Severity: serious

Hi,

On a rebuild against libxc4, your package failed to build:

libxcifc.o: In function `__libxcifc_MOD_xcdata_libxc':
/?PKGBUILDDIR?/src/libxcifc.f90:333: undefined reference to `xc_f90_version_'
/?PKGBUILDDIR?/src/libxcifc.f90:350: undefined reference to `xc_f90_func_init_'
/?PKGBUILDDIR?/src/libxcifc.f90:351: undefined reference to `xc_f90_info_name_'
/?PKGBUILDDIR?/src/libxcifc.f90:352: undefined reference to `xc_f90_family_from_id_'
/?PKGBUILDDIR?/src/libxcifc.f90:357: undefined reference to `xc_f90_func_end_'
/?PKGBUILDDIR?/src/libxcifc.f90:379: undefined reference to `xc_f90_info_flags_'
/?PKGBUILDDIR?/src/libxcifc.f90:354: undefined reference to `xc_f90_hyb_exx_coef_'
libxcifc.o: In function `__libxcifc_MOD_fxcifc_libxc':
/?PKGBUILDDIR?/src/libxcifc.f90:285: undefined reference to `xc_f90_family_from_id_'
/?PKGBUILDDIR?/src/libxcifc.f90:287: undefined reference to `xc_f90_func_init_'
/?PKGBUILDDIR?/src/libxcifc.f90:295: undefined reference to `xc_f90_lda_fxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:301: undefined reference to `xc_f90_lda_fxc_'
libxcifc.o: In function `__libxcifc_MOD_xcifc_libxc':
/?PKGBUILDDIR?/src/libxcifc.f90:106: undefined reference to `xc_f90_family_from_id_'
/?PKGBUILDDIR?/src/libxcifc.f90:108: undefined reference to `xc_f90_func_init_'
/?PKGBUILDDIR?/src/libxcifc.f90:176: undefined reference to `xc_f90_mgga_x_tb09_set_par_'
/?PKGBUILDDIR?/src/libxcifc.f90:203: undefined reference to `xc_f90_mgga_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:227: undefined reference to `xc_f90_func_end_'
/?PKGBUILDDIR?/src/libxcifc.f90:128: undefined reference to `xc_f90_lda_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:158: undefined reference to `xc_f90_gga_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:183: undefined reference to `xc_f90_mgga_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:144: undefined reference to `xc_f90_gga_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:117: undefined reference to `xc_f90_lda_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:227: undefined reference to `xc_f90_func_end_'
/?PKGBUILDDIR?/src/libxcifc.f90:132: undefined reference to `xc_f90_lda_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:164: undefined reference to `xc_f90_gga_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:121: undefined reference to `xc_f90_lda_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:150: undefined reference to `xc_f90_gga_exc_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:213: undefined reference to `xc_f90_mgga_vxc_'
/?PKGBUILDDIR?/src/libxcifc.f90:193: undefined reference to `xc_f90_mgga_vxc_'
collect2: error: ld returned 1 exit status

Full logs at:

https://buildd.debian.org/status/package.php?p=elkcode

Emilio