[Debichem-devel] Bug#1016414: abinit: autopkgtest failure

Sebastiaan Couwenberg sebastic at xs4all.nl
Mon Aug 1 21:16:38 BST 2022


Installing the dbgsym packages makes the backtrace a little more 
informative:

  Backtrace for this error:
  #0  0x7f889dd4b93f in ???
          at ./signal/../sysdeps/unix/sysv/linux/x86_64/sigaction.c:0
  #1  0x7f889e3c5518 in __netcdf_nc_interfaces_MOD_addcnullchar
          at ./fortran/module_netcdf_nc_interfaces.F90:2587
  #2  0x7f889e3b33b0 in nf_def_var_
          at ./fortran/nf_genvar.F90:63
  #3  0x7f889e427b8e in __netcdf_MOD_nf90_def_var_onedim
          at ./fortran/netcdf4_variables.F90:61
  #4  0x559ee1f317bf in __m_nctk_MOD_write_var_netcdf
          at ./shared/common/src/27_toolbox_oop/m_nctk.F90:2941
  #5  0x559ee1c23cd0 in __m_parser_MOD_prttagm
          at ./src/42_parser/m_parser.F90:3538
  #6  0x559ee1c2588f in __m_parser_MOD_prttagm_images
          at ./src/42_parser/m_parser.F90:3668
  #7  0x559ee18ae96f in __m_outvar_a_h_MOD_outvar_a_h
          at ./src/57_iovars/m_outvar_a_h.F90:191
  #8  0x559ee18ad8fa in __m_outvars_MOD_outvars
          at ./src/57_iovars/m_outvars.F90:371
  #9  0x559ee0bbfffd in abinit
          at ./src/98_main/abinit.F90:323
  #10  0x559ee0bbd88e in main
          at ./src/98_main/abinit.F90:88

Rebuilding with netcdf-fortan (4.6.0+ds-1) resolves the issue.

Kind Regards,

Bas

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