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Date: Sun, 21 Jun 2009 16:10:22 +0200
From: Lucas Nussbaum &lt;lucas@lucas-nussbaum.net&gt;
To: submit@bugs.debian.org
Subject: avogadro: FTBFS: sip.cpp:132: error: 'const struct sipAPIDef' has
	no member named 'api_convert_from_instance'
Message-ID: &lt;20090621141022.GA12419@xanadu.blop.info&gt;
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User-Agent: Mutt/1.5.20 (2009-06-14)
Delivered-To: submit@bugs.debian.org

Package: avogadro
Version: 0.9.4-3
Severity: serious
User: debian-qa@lists.debian.org
Usertags: qa-ftbfs-20090620 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
&gt; /usr/bin/g++  -fPIC -g -O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long=
 -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wforma=
t-security -fno-check-new -fno-common -pedantic -fvisibility=3Dhidden -fvis=
ibility-inlines-hidden -fpermissive -O2 -DNDEBUG -DQT_NO_DEBUG -Wl,--enable=
-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -=
lc  -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,residuecolor.so -o ../.=
=2E/../lib/residuecolor.so CMakeFiles/residuecolor.dir/residuecolor.cpp.o -=
L/usr/lib/libGLEW.so -L/build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0=
=2E9.4/obj-x86_64-linux-gnu/libavogadro/src/colors/.. ../../../lib/libavoga=
dro.so.0.9.4 -lopenbabel -lQtOpenGL -lGLU -lGL -lQtGui -lX11 -lm -lQtNetwor=
k -lQtCore -lpthread -ldl -lGLU -lGL -lX11 -lm -lQtNetwork -lQtCore -lpthre=
ad -ldl -lGLU -lGL -lGLEW -lpython2.5 -lboost_python-mt=20
&gt; make[3]: Leaving directory `/build/user-avogadro_0.9.4-3-amd64-lKRCsE/avo=
gadro-0.9.4/obj-x86_64-linux-gnu'
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles  71
&gt; [ 71%] Built target residuecolor
&gt; /usr/bin/make -f libavogadro/src/python/CMakeFiles/python-module.dir/buil=
d.make libavogadro/src/python/CMakeFiles/python-module.dir/depend
&gt; make[3]: Entering directory `/build/user-avogadro_0.9.4-3-amd64-lKRCsE/av=
ogadro-0.9.4/obj-x86_64-linux-gnu'
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 71%] Generating moleculelist.moc
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/moc-qt4 -I/build/user-avogadro_0=
=2E9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/inclu=
de -I/usr/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui =
-I/usr/include/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogad=
ro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src=
 -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.=
5 -I/usr/include -I/build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4=
/libavogadro/include -I/build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0=
=2E9.4 -I/build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_6=
4-linux-gnu/libavogadro/src/python -I/usr/lib/python2.5/site-packages/numpy=
/core/include -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_=
GLSL -DQT_DLL -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -=
o /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux=
-gnu/libavogadro/src/python/moleculelist.moc /build/user-avogadro_0.9.4-3-a=
md64-lKRCsE/avogadro-0.9.4/libavogadro/src/python/moleculelist.h
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu &amp;&amp; /usr/bin/cmake -E cmake_depends &quot;Unix Makefiles&quot; /build/user-avo=
gadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/libavogadro/src/python /build/user-avogadro_0.9.4-3=
-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu /build/user-avogadro_0.9.=
4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src/python=
 /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-=
gnu/libavogadro/src/python/CMakeFiles/python-module.dir/DependInfo.cmake --=
color=3D
&gt; Scanning dependencies of target python-module
&gt; make[3]: Leaving directory `/build/user-avogadro_0.9.4-3-amd64-lKRCsE/avo=
gadro-0.9.4/obj-x86_64-linux-gnu'
&gt; /usr/bin/make -f libavogadro/src/python/CMakeFiles/python-module.dir/buil=
d.make libavogadro/src/python/CMakeFiles/python-module.dir/build
&gt; make[3]: Entering directory `/build/user-avogadro_0.9.4-3-amd64-lKRCsE/av=
ogadro-0.9.4/obj-x86_64-linux-gnu'
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 71%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/extension.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/extension.cpp.o -c /build/user-avogadro_0.9.4-3-amd64=
-lKRCsE/avogadro-0.9.4/libavogadro/src/python/extension.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 71%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/eigen.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/eigen.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lKR=
CsE/avogadro-0.9.4/libavogadro/src/python/eigen.cpp
&gt; In file included from /usr/include/python2.5/numpy/ndarrayobject.h:1852,
&gt;                  from /usr/include/python2.5/numpy/arrayobject.h:14,
&gt;                  from /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-=
0.9.4/libavogadro/src/python/eigen.cpp:3:
&gt; /usr/include/python2.5/numpy/__multiarray_api.h: In function 'int _import=
_array()':
&gt; /usr/include/python2.5/numpy/__multiarray_api.h:972: warning: ISO C++ for=
bids casting between pointer-to-function and pointer-to-object
&gt; /usr/include/python2.5/numpy/__multiarray_api.h:975: warning: ISO C++ for=
bids casting between pointer-to-function and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Transform3d_t=
o_python_array::innerclass::convert(const Eigen::Transform3d&amp;)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:311: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Transform3d_t=
o_python_array::innerclass::convert(Eigen::Transform3d*)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:327: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Transform3d_t=
o_python_array::innerclass::convert(const Eigen::Transform3d*)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:343: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void* Vector3x_from_pyt=
hon_array&lt;Vector3x&gt;::convertible(PyObject*) [with Vector3x =3D Eigen::Matri=
x&lt;double, 3, 1, 2, 3, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:145:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;double,=
 3, 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:522:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:226: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:237: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:237: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:241: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:241: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void Vector3x_from_pyth=
on_array&lt;Vector3x&gt;::construct(PyObject*, boost::python::converter::rvalue_f=
rom_python_stage1_data*) [with Vector3x =3D Eigen::Matrix&lt;double, 3, 1, 2, =
3, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:145:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;double,=
 3, 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:522:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:262: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void* Vector3x_from_pyt=
hon_array&lt;Vector3x&gt;::convert(PyObject*) [with Vector3x =3D Eigen::Matrix&lt;do=
uble, 3, 1, 2, 3, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:155:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;double,=
 3, 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:522:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:164: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:175: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:175: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:179: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:179: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:192: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void* Vector3x_from_pyt=
hon_array&lt;Vector3x&gt;::convertible(PyObject*) [with Vector3x =3D Eigen::Matri=
x&lt;float, 3, 1, 2, 3, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:145:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;float, =
3, 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:525:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:226: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:237: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:237: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:241: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:241: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void Vector3x_from_pyth=
on_array&lt;Vector3x&gt;::construct(PyObject*, boost::python::converter::rvalue_f=
rom_python_stage1_data*) [with Vector3x =3D Eigen::Matrix&lt;float, 3, 1, 2, 3=
, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:145:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;float, =
3, 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:525:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:262: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void* Vector3x_from_pyt=
hon_array&lt;Vector3x&gt;::convert(PyObject*) [with Vector3x =3D Eigen::Matrix&lt;fl=
oat, 3, 1, 2, 3, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:155:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;float, =
3, 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:525:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:164: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:175: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:175: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:179: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:179: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:192: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void* Vector3x_from_pyt=
hon_array&lt;Vector3x&gt;::convertible(PyObject*) [with Vector3x =3D Eigen::Matri=
x&lt;int, 3, 1, 2, 3, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:145:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;int, 3,=
 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:528:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:226: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:237: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:237: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:241: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:241: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void Vector3x_from_pyth=
on_array&lt;Vector3x&gt;::construct(PyObject*, boost::python::converter::rvalue_f=
rom_python_stage1_data*) [with Vector3x =3D Eigen::Matrix&lt;int, 3, 1, 2, 3, =
1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:145:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;int, 3,=
 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:528:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:262: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static void* Vector3x_from_pyt=
hon_array&lt;Vector3x&gt;::convert(PyObject*) [with Vector3x =3D Eigen::Matrix&lt;in=
t, 3, 1, 2, 3, 1&gt;]':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:155:   instantiated from 'Vector3x_from_python_array&lt;Vecto=
r3x&gt;::Vector3x_from_python_array() [with Vector3x =3D Eigen::Matrix&lt;int, 3,=
 1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:528:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:164: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:175: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:175: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:179: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:179: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:192: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(const Vector3x&amp;) [with Vector3x =
=3D Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D Eigen::Matrix&lt;double, 3,=
 1, 2, 3, 1&gt;, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;double, 3=
, 1, 2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt;, Conversio=
n =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt; &gt;::inne=
rclass, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:120:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;double, 3, =
1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:521:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:50: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:52: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:54: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(Vector3x*) [with Vector3x =3D Ei=
gen::Matrix&lt;double, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D Eigen::Matrix&lt;double, 3,=
 1, 2, 3, 1&gt;*, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;double, =
3, 1, 2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt;*, Conversi=
on =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt; &gt;::inn=
erclass, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:121:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;double, 3, =
1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:521:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:76: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:78: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:80: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(const Vector3x*) [with Vector3x =
=3D Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D const Eigen::Matrix&lt;doub=
le, 3, 1, 2, 3, 1&gt;*, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;do=
uble, 3, 1, 2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D const Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt;*, Co=
nversion =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;double, 3, 1, 2, 3, 1&gt; =
&gt;::innerclass, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:122:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;double, 3, =
1, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:521:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:102: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:104: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:106: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(const Vector3x&amp;) [with Vector3x =
=3D Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D Eigen::Matrix&lt;float, 3, =
1, 2, 3, 1&gt;, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;float, 3, =
1, 2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt;, Conversion=
 =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt; &gt;::innerc=
lass, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:120:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;float, 3, 1=
, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:524:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:50: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:52: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:54: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(Vector3x*) [with Vector3x =3D Ei=
gen::Matrix&lt;float, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D Eigen::Matrix&lt;float, 3, =
1, 2, 3, 1&gt;*, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;float, 3,=
 1, 2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt;*, Conversio=
n =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt; &gt;::inner=
class, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:121:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;float, 3, 1=
, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:524:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:76: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:78: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:80: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(const Vector3x*) [with Vector3x =
=3D Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D const Eigen::Matrix&lt;floa=
t, 3, 1, 2, 3, 1&gt;*, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;flo=
at, 3, 1, 2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D const Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt;*, Con=
version =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;float, 3, 1, 2, 3, 1&gt; &gt;:=
:innerclass, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:122:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;float, 3, 1=
, 2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:524:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:102: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:104: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:106: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(const Vector3x&amp;) [with Vector3x =
=3D Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D Eigen::Matrix&lt;int, 3, 1,=
 2, 3, 1&gt;, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;int, 3, 1, 2=
, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt;, Conversion =
=3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt; &gt;::innerclas=
s, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:120:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;int, 3, 1, =
2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:527:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:50: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:52: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:54: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(Vector3x*) [with Vector3x =3D Ei=
gen::Matrix&lt;int, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D Eigen::Matrix&lt;int, 3, 1,=
 2, 3, 1&gt;*, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;int, 3, 1, =
2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt;*, Conversion =
=3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt; &gt;::innerclas=
s, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:121:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;int, 3, 1, =
2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:527:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:76: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:78: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:80: warning: ISO C++ forbids casting between pointer-to-fu=
nction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp: In static member function 'static PyObject* Vector3x_to_p=
ython_array&lt;Vector3x&gt;::innerclass::convert(const Vector3x*) [with Vector3x =
=3D Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt;]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D const Eigen::Matrix&lt;int,=
 3, 1, 2, 3, 1&gt;*, ToPython =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;int, =
3, 1, 2, 3, 1&gt; &gt;::innerclass]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D const Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt;*, Conve=
rsion =3D Vector3x_to_python_array&lt;Eigen::Matrix&lt;int, 3, 1, 2, 3, 1&gt; &gt;::inn=
erclass, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:122:   instantiated from 'Vector3x_to_python_array&lt;Vector3=
x&gt;::Vector3x_to_python_array() [with Vector3x =3D Eigen::Matrix&lt;int, 3, 1, =
2, 3, 1&gt;]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:527:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:102: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:104: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/eigen.cpp:106: warning: ISO C++ forbids casting between pointer-to-f=
unction and pointer-to-object
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles 72
&gt; [ 72%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/qlist.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/qlist.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lKR=
CsE/avogadro-0.9.4/libavogadro/src/python/qlist.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 72%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/glwidget.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/glwidget.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-=
lKRCsE/avogadro-0.9.4/libavogadro/src/python/glwidget.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 72%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/primitivelist.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/primitivelist.cpp.o -c /build/user-avogadro_0.9.4-3-a=
md64-lKRCsE/avogadro-0.9.4/libavogadro/src/python/primitivelist.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 72%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/moleculelist.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/moleculelist.cpp.o -c /build/user-avogadro_0.9.4-3-am=
d64-lKRCsE/avogadro-0.9.4/libavogadro/src/python/moleculelist.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles 73
&gt; [ 73%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/fragment.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/fragment.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-=
lKRCsE/avogadro-0.9.4/libavogadro/src/python/fragment.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 73%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/camera.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/camera.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lK=
RCsE/avogadro-0.9.4/libavogadro/src/python/camera.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 73%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/atom.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/atom.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lKRC=
sE/avogadro-0.9.4/libavogadro/src/python/atom.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 73%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/mesh.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/mesh.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lKRC=
sE/avogadro-0.9.4/libavogadro/src/python/mesh.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles 74
&gt; [ 74%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/painterdevice.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/painterdevice.cpp.o -c /build/user-avogadro_0.9.4-3-a=
md64-lKRCsE/avogadro-0.9.4/libavogadro/src/python/painterdevice.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 74%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/main.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/main.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lKRC=
sE/avogadro-0.9.4/libavogadro/src/python/main.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 74%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/toolgroup.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/toolgroup.cpp.o -c /build/user-avogadro_0.9.4-3-amd64=
-lKRCsE/avogadro-0.9.4/libavogadro/src/python/toolgroup.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 74%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/tool.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/tool.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lKRC=
sE/avogadro-0.9.4/libavogadro/src/python/tool.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles 75
&gt; [ 75%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/pluginmanager.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/pluginmanager.cpp.o -c /build/user-avogadro_0.9.4-3-a=
md64-lKRCsE/avogadro-0.9.4/libavogadro/src/python/pluginmanager.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 75%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/molecule.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/molecule.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-=
lKRCsE/avogadro-0.9.4/libavogadro/src/python/molecule.cpp
&gt; /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_0.9.4-3-amd6=
4-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/CMakeFiles=20
&gt; [ 75%] Building CXX object libavogadro/src/python/CMakeFiles/python-modul=
e.dir/sip.cpp.o
&gt; cd /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-li=
nux-gnu/libavogadro/src/python &amp;&amp; /usr/bin/g++   -Dpython_module_EXPORTS -D=
_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -D=
QT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g =
-O2 -g -Wall -O2 -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wcha=
r-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new=
 -fno-common -pedantic -fvisibility=3Dhidden -fvisibility-inlines-hidden -f=
permissive -O2 -DNDEBUG -DQT_NO_DEBUG -fPIC -I/build/user-avogadro_0.9.4-3-=
amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/include -I/usr=
/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/in=
clude/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_0.9.4-=
3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/src -I/usr/i=
nclude/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/buil=
d/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/include -I/=
build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4 -I/build/user-avoga=
dro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/obj-x86_64-linux-gnu/libavogadro/sr=
c/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFi=
les/python-module.dir/sip.cpp.o -c /build/user-avogadro_0.9.4-3-amd64-lKRCs=
E/avogadro-0.9.4/libavogadro/src/python/sip.cpp
&gt; In file included from /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-=
0.9.4/libavogadro/src/python/sip.cpp:4:
&gt; /usr/include/python2.5/sip.h:515: warning: comma at end of enumerator list
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In static member function 'static PyObject* QClass_converte=
rs&lt;T&gt;::QClass_to_PyQt::convert(const T&amp;)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:132: error: 'const struct sipAPIDef' has no member named 'ap=
i_convert_from_instance'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In static member function 'static PyObject* QClass_converte=
rs&lt;T&gt;::QClass_to_PyQt::convert(T*)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:148: error: 'const struct sipAPIDef' has no member named 'ap=
i_convert_from_instance'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In static member function 'static void* QClass_converters&lt;T=
&gt;::QClass_from_PyQt(PyObject*)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:158: error: 'const struct sipAPIDef' has no member named 'ap=
i_wrapper_check'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:161: error: 'const struct sipAPIDef' has no member named 'ap=
i_transfer'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:165: error: 'struct sipWrapper' has no member named 'u'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In static member function 'static PyObject* QList_QAction_t=
o_python_list_PyQt::convert(const QList&lt;QAction*&gt;&amp;)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:196: error: 'const struct _sipAPIDef' has no member named 'a=
pi_convert_from_instance'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In function 'PyObject* toPyQt(T*)':
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:322: error: 'const struct sipAPIDef' has no member named 'ap=
i_convert_from_instance'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: At global scope:
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QObject]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QObject, ToPython =3D QC=
lass_converters&lt;QObject&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QObject, Conversion =3D QClass_converters&lt;QObje=
ct&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QObject]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:354:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QWidget]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QWidget, ToPython =3D QC=
lass_converters&lt;QWidget&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QWidget, Conversion =3D QClass_converters&lt;QWidg=
et&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QWidget]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:355:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QAction]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QAction, ToPython =3D QC=
lass_converters&lt;QAction&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QAction, Conversion =3D QClass_converters&lt;QActi=
on&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QAction]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:356:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QDockWidget]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QDockWidget, ToPython =
=3D QClass_converters&lt;QDockWidget&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QDockWidget, Conversion =3D QClass_converters&lt;Q=
DockWidget&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QDockWidget]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:357:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QUndoCommand]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QUndoCommand, ToPython =
=3D QClass_converters&lt;QUndoCommand&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QUndoCommand, Conversion =3D QClass_converters&lt;=
QUndoCommand&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QUndoCommand]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:358:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QUndoStack]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QUndoStack, ToPython =3D=
 QClass_converters&lt;QUndoStack&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QUndoStack, Conversion =3D QClass_converters&lt;QU=
ndoStack&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QUndoStack]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:359:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QPoint]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QPoint, ToPython =3D QCl=
ass_converters&lt;QPoint&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QPoint, Conversion =3D QClass_converters&lt;QPoint=
&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QPoint]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:360:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QColor]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QColor, ToPython =3D QCl=
ass_converters&lt;QColor&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QColor, Conversion =3D QClass_converters&lt;QColor=
&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QColor]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:361:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QMouseEvent]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QMouseEvent, ToPython =
=3D QClass_converters&lt;QMouseEvent&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QMouseEvent, Conversion =3D QClass_converters&lt;Q=
MouseEvent&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QMouseEvent]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:362:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QWheelEvent]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QWheelEvent, ToPython =
=3D QClass_converters&lt;QWheelEvent&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QWheelEvent, Conversion =3D QClass_converters&lt;Q=
WheelEvent&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QWheelEvent]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:363:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp: In instantiation of 'static PyObject* QClass_converters&lt;T&gt;:=
:QClass_to_PyQt::convert(const T&amp;) [with T =3D QSettings]':
&gt; /usr/include/boost/python/converter/as_to_python_function.hpp:27:   insta=
ntiated from 'static PyObject* boost::python::converter::as_to_python_funct=
ion&lt;T, ToPython&gt;::convert(const void*) [with T =3D QSettings, ToPython =3D =
QClass_converters&lt;QSettings&gt;::QClass_to_PyQt]'
&gt; /usr/include/boost/python/to_python_converter.hpp:87:   instantiated from=
 'boost::python::to_python_converter&lt;T, Conversion, has_get_pytype&gt;::to_pyt=
hon_converter() [with T =3D QSettings, Conversion =3D QClass_converters&lt;QSe=
ttings&gt;::QClass_to_PyQt, bool has_get_pytype =3D false]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:175:   instantiated from 'QClass_converters&lt;T&gt;::QClass_conve=
rters() [with T =3D QSettings]'
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:364:   instantiated from here
&gt; /build/user-avogadro_0.9.4-3-amd64-lKRCsE/avogadro-0.9.4/libavogadro/src/=
python/sip.cpp:126: warning: unused parameter 'object'
&gt; make[3]: *** [libavogadro/src/python/CMakeFiles/python-module.dir/sip.cpp=
=2Eo] Error 1

The full build log is available from:
   http://people.debian.org/~lucas/logs/2009/06/20/avogadro_0.9.4-3_lsid64.=
buildlog

A list of current common problems and possible solutions is available at=20
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot.  Internet was not
accessible from the build systems.

--=20
| Lucas Nussbaum
| lucas@lucas-nussbaum.net   http://www.lucas-nussbaum.net/ |
| jabber: lucas@nussbaum.fr             GPG: 1024D/023B3F4F |


]