[pkg-bioc] Fwd: [NETTAB] Preliminar Scientific Programme, Early registration deadline
Steffen Moeller
moeller at inb.uni-luebeck.de
Wed May 16 11:34:21 UTC 2007
Hello,
pkg-bioc (and CRAN, BioConductor and Debian with it) will be presented on the
NETTAB conference next month. It would be lovely to meet some of you
there ... be it to exchange keys or to talk more science than on the
Debian-Science mailing list :-)
Best regards
Steffen
---------- Forwarded Message ----------
Subject: [NETTAB] Preliminar Scientific Programme, Early registration deadline
Date: Wednesday 16 May 2007
From: Paolo Romano <paolo.romano at istge.it>
To: nettab-announce at nettab.org
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NETTAB-ANNOUNCE: News on NETTAB Workshops Series
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In this issue:
1. Preliminar Scientific Programme
2. Early registration deadline
3. Help us spread the word
4. Our sponsors
+++++
1. Preliminar Scientific Programme
I'm glad to be able to attach here below the Provisional Scientific Programme.
I take this occasion to thank all speakers for
their participation in the NETTAB 2007 Workshop.
TUESDAY JUNE 12, 2007
MORNING
Tutorials
+ RDF standard and related techn, Speaker to be announced
+ Modelling Biological Knowledge in OWL, G. Moulton and R. Stevens.
AFTERNOON
Tutorials
+ BioPAX: OWL based biological pathway exchange format, G. Bader,
+ Reasoning on ontologies - How to use Protégé
and RacerPro together, M. Iacovella,
+ The Unified Medical Language System (UMLS) and
the Semantic Web, O. Bodenreider.
EVENING
Welcome Party
WEDNESDAY JUNE 13, 2007
MORNING
Opening Session
+ Welcome + Introduction
+ Opening Lecture: Data integration issues in
biology in the current semantic poor information environment, Gary Bader
Focus Session 1. Goals of the Semantic Web in Bioinformatics
3 Oral Communications
+ On the integration of biomedical knowledge
bases: problems and solutions, M. Fato et al,
+ Intuitive and machine-understandable
organization of the bioinformatics domain and
related resources with Resourceomes, N. Cannata et al,
+ communication promoted from posters
Invited Lecture: The Semantic Web for Health Care
and Life Science Interest Group and its Goals, Eric Neumann
AFTERNOON
General Theme Session 1: From Components to Processes in Bioinformatics
4 Oral Communications
+ Bio-jETI: a Service Integration, Design, and
Provisioning Platform for Orchestrated
Bioinformatics Processes, C. Kubczaket al,
+ Variations of GeneFisher as Processes in Bio-jETI, A.-L. Lamprecht et al,
+ Webservices and Workflows on the Bielefeld
Bioinformatics Server: Practices and Problems, S. Hartmeier et al,
+ Requirements of a workflow system for systems biology, M. Haubrock et al.
Flash Poster Session
10 posters presentations
Adjunct Theme Session 1: Algorithms in Bioinformatics
Invited Lecture: Title to be defined, Fabrizio Luccio
2 oral communications
+ A Grammatical Inference approach to
Transmembrane domain prediction, P. Peris et al,
+ Reconstructing networks of pathways via
significance analysis of their intersections, M. Francesconi et al.
THURSDAY JUNE 14, 2007
MORNING
General Session 2: Network Tools and Applications in Biology
4 presentations (15'+5'+5')
+ Biohealth in EELA, V. Hernández et al,
+ Scientific Grid Computing via
Community-Controlled Autobuilding of Software
Packages Across Architectures, S. Möller et al,
+ Integrated system for prediction of the
biological activity, toxicity and physicochemical
properties, V.S. Skvortsovet al,
+ Network Alignment Tools for Novel Insight in
Cellular Machinery, A. Bhatkar et al
Focus Session 2: Semantic Web Technologies and Tools (105' - 130')
Invited Lecture: Publishing ontologies on the Web, Guus Schreiber
2 oral communications
+ An ontological modeling approach to
neurovascular disease study: the NEUROWEB case, G. Colombo et al,
+ Ontology-Based Mediation in the Amine System Project, I. Navas-Delgado et
al.
Invited Lecture: Bio-ontologies: The cream in the
Semantic Web layer cake, Olivier Bodenreider
AFTERNOON
Adjunct Theme Session 2: Formal Methods in Systems Biology
Invited Lecture: Title to be determined, Pierpaolo Degano
4 oral communications
+ A Toolkit Supporting Formal Reasoning about
Causality inMetabolic Networks, C. Bodei et al,
+ In silico stochastic simulation of Ca triggered
synaptic release, A. Bracciali et al,
+ Executable Symbolic Models of Neural Processes, S.M. Iyengar et al,
+ communication promoted from posters
Poster Session
1 Software Demonstration
+ Visualization of moving biomolecules: a new
approach based on professional 3D animation software, Y. Porozov et al
EVENING
Social Dinner
FRIDAY JUNE 15, 2007
MORNING
Focus Theme Session 3: Applications of Semantic Web in Bioinformatics
Invited Lecture: Sealife: A Semantic Grid Browser
for the Life Sciences Applied to the Study of
Infectious Diseases, M. Schroeder, A. Burger and R. Stevens
2 oral communications
+ FungalWeb: A semantic web for exploring
knowledge-based bioinformatics, G. Butler and C.J.O. Baker
+ communication promoted from posters
Closing Session
Panel discussion: Goals and perspectives of a Semantic Web for Bioinformatics
Presentation of NETTAB 2008
Farewell
The workshop will be closed on Friday June 15, 2007, around 1.00 PM.
For any further information or clarification,
please contact the organization by email at info at nettab.org .
+++++
2. Early registration deadline
Registration is open at the workshop's web site.
See http://www.nettab.org/2007/rform.html .
EARLY REGISTRATION FEES ONLY APPLY UNTIL NEXT FRIDAY, MAY 18, 2007.
Please register as soon as possible in order to
help the organization of the event.
Please remind as well that the organization won't
book hotel's rooms for participants. If you are
interested in a support for the booking,
consider asking to Michele Viaggi Sas travel
agency. They are supporting the organization of
the workshop and have granted their
logistic support to all participants.
Michele Viaggi SaS
Contact: Ms Lucia Dini
Tel: +39 050 24562, Fax: +39 050 503094
Email: info at micheleviaggi.it
Finally, please consider that the workshop will
be held immediately before the main events of the
'Giugno Pisano' (see the workshop's site for further information).
As a consequence, it would be wise to book
hotels' rooms well in advance, as soon as possible anyway.
+++++
3. Help us spread the word
The NETTAB 2007 workshop will be announced to
many mailing lists devoted both to the
bioinformatics and the semantic web researchers.
The announcement will also be posted to some directories of events.
We are always looking for new channels for announcing the workshop.
Help us by pointing out mailing lists and web
sites or by submitting a short note to your colleagues.
A presentation of the Workshop is available upon
request for free redistribution and hanging up in bulletin boards.
Please ask the Secretariat by email at info at nettab.org .
Thank you in advance.
+++++
4. Our sponsors
ERCIM, the European Research Consortium for
Informatics and Mathematics is supporting this workshop.
See http://www.ercim.org/ for more information on this consortium.
Please email info at nettab.org for information on
how to become a sponsor of this workshop and on related opportunities.
+++++
Looking forward to seeing you all very soon in Sunny Tuscany.
Best regards.
On behalf of the Organizing Committee
Paolo Romano
Paolo Romano (paolo.romano at istge.it)
Bioinformatics and Structural Proteomics
National Cancer Research Institute (IST)
Largo Rosanna Benzi, 10, I-16132, Genova, Italy
Tel: +39-010-5737-288 Fax: +39-010-5737-295
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-------------------------------------------------------
--
Dr. Steffen Möller
University of Lübeck
Institute for Neuro- and Bioinformatics
Ratzeburger Allee 160
23538 Lübeck
Germany
T: +49 451 500 5504
F: +49 451 500 5502
moeller at inb.uni-luebeck.de
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