[pymvpa] problem with shogun import

[brice rebsamen]

I'm using debian wheezy (testing)
pymvpa (0.4) packages installed with all required dependencies, as
well as shogun packages.



from mvpa.suite import *
---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)

/media/data/Documents/CognitiveLoad/code/pycode/eeg/<ipython console>
in <module>()

/usr/lib/pymodules/python2.6/mvpa/suite.py in <module>()
     56 from mvpa.clfs.stats import *
     57 if externals.exists('libsvm') or externals.exists('shogun'):
---> 58     from mvpa.clfs.svm import *
     59 from mvpa.clfs.transerror import *
     60 from mvpa.clfs.warehouse import *

/usr/lib/pymodules/python2.6/mvpa/clfs/svm.py in <module>()
     52
     53 if externals.exists('shogun'):
---> 54     from mvpa.clfs import sg
     55     SVM = sg.SVM
     56     #if not 'LinearCSVMC' in locals():


/usr/lib/pymodules/python2.6/mvpa/clfs/sg/__init__.py in <module>()
     15     debug('INIT', 'mvpa.clfs.sg')
     16
---> 17 from mvpa.clfs.sg.svm import SVM
     18
     19 if __debug__:

/usr/lib/pymodules/python2.6/mvpa/clfs/sg/svm.py in <module>()
     29 from mvpa.base import externals, warning
     30 if externals.exists('shogun', raiseException=True):
---> 31     import shogun.Features
     32     import shogun.Classifier
     33     import shogun.Regression

/usr/lib/pymodules/python2.6/shogun/Features.py in <module>()
   1194
   1195 try: import Library as shogunLibrary
-> 1196 except exceptions.ImportError: import shogun.Library as shogunLibrary
   1197
   1198 def __SGgetstate__(self):

/usr/lib/pymodules/python2.6/shogun/Library.py in <module>()
     27                 fp.close()
     28             return _mod
---> 29     _Library = swig_import_helper()
     30     del swig_import_helper
     31 else:

/usr/lib/pymodules/python2.6/shogun/Library.py in swig_import_helper()
     23         if fp is not None:
     24             try:
---> 25                 _mod = imp.load_module('_Library', fp,
pathname, description)
     26             finally:
     27                 fp.close()

ImportError: /usr/lib/pymodules/python2.6/shogun/_Library.so:
undefined symbol: _ZN6shogun21CSerializableHdf5FileC1EPKcc