<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div>Hi,</div><div>Thanks for your quick response. However, I'm still having problems involving mvpa.base issue. On two different machines (OS X) I've used " git clone" to get new updated versions of the repository, wiped out the old installation and installed the new one via setup.py...but I am finding problems related to references to mvpa.base. For example, below you will see the output when I run "from mvpa.clfs import smlr".</div><div><br></div><div>I'm surprised at these errors because it seems like these things are working for everyone else besides me. Based on my reading of the git archives, it seems that mvpa.base disappeared recently---maybe some people still have the old versions of mvpa.base.* in their site-packages so these commands are still working for some?</div><div><br></div><div>Josh</div><div><br></div><div><br></div><div><br></div><div><blockquote type="cite" class=""><div><font class="Apple-style-span" color="#000000">In [1]: from mvpa.clfs import smlr</font></div><div><font class="Apple-style-span" color="#000000">---------------------------------------------------------------------------</font></div><div><font class="Apple-style-span" color="#000000">ImportError Traceback (most recent call last)</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Volumes/hippo/gammaPredict2/<ipython console> in <module>()</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Library/Python/2.5/site-packages/mvpa/clfs/smlr.py in <module>()</font></div><div><font class="Apple-style-span" color="#000000"> 14 import numpy as N</font></div><div><font class="Apple-style-span" color="#000000"> 15 </font></div><div><font class="Apple-style-span" color="#000000">---> 16 from mvpa.clfs.base import Classifier</font></div><div><font class="Apple-style-span" color="#000000"> 17 from mvpa.measures.base import Sensitivity</font></div><div><font class="Apple-style-span" color="#000000"> 18 from mvpa.misc.exceptions import ConvergenceError</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Library/Python/2.5/site-packages/mvpa/clfs/base.py in <module>()</font></div><div><font class="Apple-style-span" color="#000000"> 37 from time import time</font></div><div><font class="Apple-style-span" color="#000000"> 38 </font></div><div><font class="Apple-style-span" color="#000000">---> 39 from mvpa.mappers import MaskMapper</font></div><div><font class="Apple-style-span" color="#000000"> 40 from mvpa.datasets.splitter import NFoldSplitter</font></div><div><font class="Apple-style-span" color="#000000"> 41 from mvpa.misc.state import StateVariable, Stateful, Harvestable</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Library/Python/2.5/site-packages/mvpa/mappers/__init__.py in <module>()</font></div><div><font class="Apple-style-span" color="#000000"> 15 debug('INIT', 'mvpa.mappers')</font></div><div><font class="Apple-style-span" color="#000000"> 16 </font></div><div><font class="Apple-style-span" color="#000000">---> 17 from mvpa.mappers.mask import MaskMapper</font></div><div><font class="Apple-style-span" color="#000000"> 18 from mvpa.mappers.pca import PCAMapper</font></div><div><font class="Apple-style-span" color="#000000"> 19 from mvpa.mappers.svd import SVDMapper</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Library/Python/2.5/site-packages/mvpa/mappers/mask.py in <module>()</font></div><div><font class="Apple-style-span" color="#000000"> 14 from operator import isSequenceType</font></div><div><font class="Apple-style-span" color="#000000"> 15 </font></div><div><font class="Apple-style-span" color="#000000">---> 16 from mvpa.mappers.metric import MetricMapper</font></div><div><font class="Apple-style-span" color="#000000"> 17 from mvpa.datasets.metric import DescreteMetric, cartesianDistance</font></div><div><font class="Apple-style-span" color="#000000"> 18 from mvpa.base.dochelpers import enhancedDocString</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Library/Python/2.5/site-packages/mvpa/mappers/metric.py in <module>()</font></div><div><font class="Apple-style-span" color="#000000"> 12 </font></div><div><font class="Apple-style-span" color="#000000"> 13 </font></div><div><font class="Apple-style-span" color="#000000">---> 14 from mvpa.mappers.base import Mapper</font></div><div><font class="Apple-style-span" color="#000000"> 15 from mvpa.datasets.metric import Metric</font></div><div><font class="Apple-style-span" color="#000000"> 16 from mvpa.base.dochelpers import enhancedDocString</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Library/Python/2.5/site-packages/mvpa/mappers/base.py in <module>()</font></div><div><font class="Apple-style-span" color="#000000"> 12 </font></div><div><font class="Apple-style-span" color="#000000"> 13 from mvpa.misc.vproperty import VProperty</font></div><div><font class="Apple-style-span" color="#000000">---> 14 from mvpa.base.dochelpers import enhancedDocString</font></div><div><font class="Apple-style-span" color="#000000"> 15 </font></div><div><font class="Apple-style-span" color="#000000"> 16 </font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">ImportError: No module named base.dochelpers</font></div><div><br></div></blockquote></div><div><br></div><div><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><blockquote type="cite" class=""><span class="Apple-style-span" style="color: rgb(0, 0, 0); font-family: Times; font-size: 16px; "><pre style="font-size: 10px; ">Hi Joshua,
Welcome!! Everybody is new to PyMVPA (besides Michael) since it is quite
a new/fresh project ;-)
Before we dive into debugging, we need to make sure that it is indeed
the 'most recent' ;-) Released version 0.1.0 is far from being recent
now, and master branch was advanced ahead only today. What is shasum of
the checkout you are using (if you got it from git)?
Thus I would recommend first to fetch new pymvpa from git and try
current 'master'. Please report back if error disappears, ok?
</pre></span></blockquote></div></div><div><div>On May 20, 2008, at 5:50 PM, Joshua Jacobs wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div>Hi everyone,</div><div><br></div><div>I'm new to the MVPA and I think you guys have done a great job with it. However, I'm having a funny problem right now. </div><div><br></div><div>I start iPython, try to import NFold Splitter, and I get the below error. Am I doing something wrong?</div><div><br></div><div><blockquote type="cite" class=""><div><font class="Apple-style-span" color="#000000">In [2]: from mvpa.datasets.splitter import NFoldSplitter</font></div><div><font class="Apple-style-span" color="#000000">---------------------------------------------------------------------------</font></div><div><font class="Apple-style-span" color="#000000">ImportError Traceback (most recent call last)</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Users/josh/<ipython console> in <module>()</font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">/Library/Python/2.5/site-packages/mvpa/datasets/splitter.py in <module>()</font></div><div><font class="Apple-style-span" color="#000000"> 16 </font></div><div><font class="Apple-style-span" color="#000000"> 17 import mvpa.misc.support as support</font></div><div><font class="Apple-style-span" color="#000000">---> 18 from mvpa.base.dochelpers import enhancedDocString</font></div><div><font class="Apple-style-span" color="#000000"> 19 </font></div><div><font class="Apple-style-span" color="#000000"> 20 </font></div><div><font class="Apple-style-span" color="#000000"><br></font></div><div><font class="Apple-style-span" color="#000000">ImportError: No module named base.dochelpers</font></div><div><br></div></blockquote><br></div><div>I'm pretty sure that I'm using the most recent version of the code from the git repository... </div><div><br></div><div>Thanks for your help,</div><div>Josh</div></div></blockquote></div><br></body></html>