<html><head></head><body>Just to make sure, did you do<br>
apt-get update<br>
Any time recently?<br><br><div class="gmail_quote">On September 17, 2017 5:34:06 PM EDT, Anna Manelis <anna.manelis@gmail.com> wrote:<blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
<div dir="ltr">My computer is already configured to use NeuroDebian repository, so I hoped to be able to install <span style="font-size:12.8px">singularity-container. This is not the case</span><div><span style="font-size:12.8px"><br /></span></div><div><span style="font-size:12.8px">E: Unable to locate package singularity-container</span><span style="font-size:12.8px"><br /></span></div><div><span style="font-size:12.8px"><br /></span></div><div><span style="font-size:12.8px">I did not have problem installing other packages from NeuroDebian though.</span></div></div><div class="gmail_extra"><br /><div class="gmail_quote">On Sun, Sep 17, 2017 at 5:23 PM, Yaroslav Halchenko <span dir="ltr"><<a href="mailto:yoh@onerussian.com" target="_blank">yoh@onerussian.com</a>></span> wrote:<br /><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div>In NeuroDebian yes<br />
<a href="http://neuro.debian.net/pkgs/singularity-container.html?highlight=singularity" target="_blank">http://neuro.debian.net/pkgs/<wbr />singularity-container.html?<wbr />highlight=singularity</a><div><div class="h5"><br /><br /><div class="gmail_quote">On September 17, 2017 4:10:59 PM EDT, Anna Manelis <<a href="mailto:anna.manelis@gmail.com" target="_blank">anna.manelis@gmail.com</a>> wrote:<blockquote class="gmail_quote" style="margin:0pt 0pt 0pt 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div dir="ltr"><div><div><br /></div>I tried to install singularity container<br /><br />sudo apt-get install singularity-container<br /><br /></div>But it failed to install with the error:<br /><div><div><div><br />E: Unable to locate package singularity-container<br /><br /></div><div>Is singularity-container actually available for good old wheezy?<br /><br /></div><div>Thank you,<br /></div><div>Anna.<br /></div><div><br /><br /></div></div></div></div><div class="gmail_extra"><br /><div class="gmail_quote">On Wed, Sep 13, 2017 at 2:01 PM, Yaroslav Halchenko <span dir="ltr"><<a href="mailto:debian@onerussian.com" target="_blank">debian@onerussian.com</a>></span> wrote:<br /><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><span><br />
On Wed, 13 Sep 2017, Anna Manelis wrote:<br />
<br />
</span><span>> Thank you very much! I think it works.<br />
<br />
> I ran in terminal:<br />
<br />
> sudo dpkg --purge python-scikits-learn<br />
> sudo dpkg --purge python-sklearn<br />
> export MVPA_EXTERNALS_HAVE_SKL=no<br />
> sudo apt-get install python-mvpa2<br />
> sudo apt-get autoremove python-sklearn-lib<br />
<br />
> python<br />
> Python 2.7.3 (default, Jun 21 2016, 18:38:19)<br />
> [GCC 4.7.2] on linux2<br />
> Type "help", "copyright", "credits" or "license" for more information.<br />
> >>> from mvpa2.tutorial_suite import *<br />
> /usr/lib/python2.7/dist-packag<wbr />es/nose/util.py:14: DeprecationWarning: The<br />
> compiler package is deprecated and removed in Python 3.x.<br />
</span>> Â from compiler.consts import CO_GENERATOR<br />
<span><br />
> Should I just disregard this DeprecationWarning?<br />
<br />
</span>yes<br />
<span><br />
> I am afraid to upgrade Debian from wheezy - who knows what's gonna happen<br />
<br />
</span>;)<br />
<br />
you could learn also to use singularity... we have it in neurodebian<br />
apt-get install singularity-container<br />
singularity pull shub://neurodebian/neurodebian<br />
./neurodebian-neurodebian-mast<wbr />er.img<br />
<br />
and you are in a fresh neurodebian ... let me know how it goes<br />
<div class="m_-3485661313009977386HOEnZb"><div class="m_-3485661313009977386h5"><br />
--<br />
Yaroslav O. Halchenko<br />
Center for Open Neuroscience <a href="http://centerforopenneuroscience.org" rel="noreferrer" target="_blank">http://centerforopenneuroscie<wbr />nce.org</a><br />
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755<br />
Phone: <a href="tel:%2B1%20%28603%29%20646-9834" value="+16036469834" target="_blank">+1 (603) 646-9834</a> Fax: <a href="tel:%2B1%20%28603%29%20646-1419" value="+16036461419" target="_blank">+1 (603) 646-1419</a><br />
WWW: <a href="http://www.linkedin.com/in/yarik" rel="noreferrer" target="_blank">http://www.linkedin.com/in/ya<wbr />rik</a><br />
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