[DebianGIS-dev] Bug#456862: hdf5: FTBFS: dpkg-shlibdeps: failure: couldn't find library libh5test-1.6.5.so.0 needed by debian/hdf5-tools/usr/bin/h5perf (its RPATH is '').

Tue Dec 18 07:56:20 UTC 2007

Package: hdf5
version: 1.6.5-5
Severity: serious
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20071217 qa-ftbfs
Justification: FTBFS on i386

Hi,

During a rebuild of all packages in sid, your package failed to build on i386.

Relevant part:

 > make[3]: Entering directory `/build/user/hdf5-1.6.5/debian/build-mpich/examples'
 > ../../../bin/mkdirs /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c
 > + /usr/bin/install -c -m 644 ../../../examples/h5_chunk_read.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_compound.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_extend_write.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_group.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_read.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_write.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_select.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_attribute.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_mount.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_reference.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/h5_drivers.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > + /usr/bin/install -c -m 644 ../../../examples/ph5example.c /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/doc/hdf5/examples/c/.
 > make[3]: Leaving directory `/build/user/hdf5-1.6.5/debian/build-mpich/examples'
 > make[2]: Leaving directory `/build/user/hdf5-1.6.5/debian/build-mpich'
 > PATH="$PATH:/sbin" ldconfig -n /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/lib
 > ----------------------------------------------------------------------
 > Libraries have been installed in:
 >    /build/user/hdf5-1.6.5/debian/build-mpich/tmpinst/usr/lib
 > 
 > If you ever happen to want to link against installed libraries
 > in a given directory, LIBDIR, you must either use libtool, and
 > specify the full pathname of the library, or use the `-LLIBDIR'
 > flag during linking and do at least one of the following:
 >    - add LIBDIR to the `LD_LIBRARY_PATH' environment variable
 >      during execution
 >    - add LIBDIR to the `LD_RUN_PATH' environment variable
 >      during linking
 >    - use the `-Wl,--rpath -Wl,LIBDIR' linker flag
 >    - have your system administrator add LIBDIR to `/etc/ld.so.conf'
 > 
 > See any operating system documentation about shared libraries for
 > more information, such as the ld(1) and ld.so(8) manual pages.
 > ----------------------------------------------------------------------
 > make[1]: Leaving directory `/build/user/hdf5-1.6.5/debian/build-mpich'
 > dh_install -plibhdf5-mpich-1.6.5-0 -plibhdf5-mpich-dev \
 > 		--sourcedir=debian/build-mpich/tmpinst
 > dh_testdir
 > dh_testroot 
 > dh_installdocs -a
 > dh_installman -a
 > dh_installchangelogs -a -k release_docs/RELEASE.txt
 > dh_link -a
 > dh_strip -a
 > dh_compress -a
 > dh_fixperms -a
 > dh_makeshlibs -plibhdf5-lam-1.6.5-0 -V libhdf5-lam-1.6.5-0
 > dh_makeshlibs -plibhdf5-mpich-1.6.5-0 -V libhdf5-mpich-1.6.5-0
 > dh_installdeb -a
 > dh_shlibdeps -phdf5-tools -Llibhdf5-serial-1.6.5-0 -ldebian/libhdf5-serial-1.6.5-0/usr/lib
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/gif2h5 shouldn't be linked with libpthread.so.0 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/gif2h5 shouldn't be linked with libz.so.1 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/gif2h5 shouldn't be linked with libm.so.6 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5dump shouldn't be linked with libpthread.so.0 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5dump shouldn't be linked with libz.so.1 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5dump shouldn't be linked with libm.so.6 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h52gif shouldn't be linked with libpthread.so.0 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h52gif shouldn't be linked with libz.so.1 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h52gif shouldn't be linked with libm.so.6 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5jam shouldn't be linked with libz.so.1 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5jam shouldn't be linked with libm.so.6 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5import shouldn't be linked with libpthread.so.0 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5import shouldn't be linked with libz.so.1 (it uses none of its symbols).
 > dpkg-shlibdeps: warning: debian/hdf5-tools/usr/bin/h5import shouldn't be linked with libm.so.6 (it uses none of its symbols).
 > dpkg-shlibdeps: failure: couldn't find library libh5test-1.6.5.so.0 needed by debian/hdf5-tools/usr/bin/h5perf (its RPATH is '').
 > Note: libraries are not searched in other binary packages that do not have any shlibs file.
 > To help dpkg-shlibdeps find private libraries, you might need to set LD_LIBRARY_PATH.
 > dh_shlibdeps: command returned error code 512
 > make: *** [binary-arch] Error 1
 > dpkg-buildpackage: failure: /usr/bin/fakeroot debian/rules binary gave error exit status 2

The full build log is available from:
	http://people.debian.org/~lucas/logs/2007/12/17

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot containing a sid i386
environment.  Internet was not accessible from the build systems.

-- 
| Lucas Nussbaum
| lucas at lucas-nussbaum.net   http://www.lucas-nussbaum.net/ |
| jabber: lucas at nussbaum.fr             GPG: 1024D/023B3F4F |