[netcdf] branch upstream updated (c449008 -> 2cfdf3d)
Bas Couwenberg
sebastic at debian.org
Tue Mar 20 06:53:09 UTC 2018
This is an automated email from the git hooks/post-receive script.
sebastic pushed a change to branch upstream
in repository netcdf.
from c449008 New upstream version 4.6.0
new 2cfdf3d New upstream version 4.6.1
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.github/CODEOWNERS | 9 +
.gitignore | 1 -
CMakeLists.txt | 246 +--
CODE_OF_CONDUCT.md | 46 +
Makefile.am | 42 +-
Makefile.in | 59 +-
RELEASE_NOTES.md | 8 +-
aclocal.m4 | 191 +--
cf | 7 +-
cf.cmake | 7 +-
compile | 8 +-
config.guess | 559 +++----
config.h.cmake.in | 159 +-
config.h.cmake.in.old-works | 50 -
config.h.in | 113 +-
config.sub | 249 ++-
configure | 1266 +++------------
configure.ac | 149 +-
dap4_test/Makefile.in | 74 +-
depcomp | 8 +-
docs/Doxyfile.developer | 2 +-
docs/Makefile.am | 2 +-
docs/Makefile.in | 20 +-
docs/filters.md | 34 +-
docs/images/Makefile.in | 16 +-
docs/indexing.dox | 218 +++
docs/windows-binaries.md | 26 +-
examples/C/Makefile.am | 14 +-
examples/C/Makefile.in | 139 +-
examples/C/filter_example.c | 2 +-
examples/C/hdf5plugins/.gitignore | 11 +
examples/C/hdf5plugins/CMakeLists.txt | 6 -
examples/C/hdf5plugins/H5Zbzip2.c | 181 ---
examples/C/hdf5plugins/Makefile.am | 2 +-
examples/C/hdf5plugins/Makefile.in | 71 +-
examples/C/hdf5plugins/blocksort.c | 1094 -------------
examples/C/hdf5plugins/bzlib.c | 1572 -------------------
examples/C/hdf5plugins/bzlib.h | 282 ----
examples/C/hdf5plugins/bzlib_private.h | 509 ------
examples/C/hdf5plugins/compress.c | 672 --------
examples/C/hdf5plugins/crctable.c | 104 --
examples/C/hdf5plugins/decompress.c | 646 --------
examples/C/hdf5plugins/h5bzip2.h | 30 -
examples/C/hdf5plugins/huffman.c | 205 ---
examples/C/hdf5plugins/randtable.c | 84 -
examples/C/run_nc4_valgrind_tests.sh | 24 -
examples/C/run_valgrind_tests.sh | 24 -
examples/CDL/Makefile.in | 18 +-
examples/Makefile.in | 18 +-
h5_test/Makefile.am | 13 +-
h5_test/Makefile.in | 191 ++-
h5_test/run_valgrind_tests.sh | 29 -
hdf4_test/CMakeLists.txt | 16 +
hdf4_test/Makefile.am | 37 +
{nctest => hdf4_test}/Makefile.in | 262 ++--
{nc_test4 => hdf4_test}/ref_chunked.hdf4 | Bin
{nc_test4 => hdf4_test}/ref_contiguous.hdf4 | Bin
hdf4_test/run_formatx_hdf4.sh | 51 +
{nc_test4 => hdf4_test}/run_get_hdf4_files.sh | 2 +-
{nc_test4 => hdf4_test}/tst_chunk_hdf4.c | 0
{nc_test4 => hdf4_test}/tst_h4_lendian.c | 1 -
{nc_test4 => hdf4_test}/tst_interops2.c | 2 +-
{nc_test4 => hdf4_test}/tst_interops3.c | 1 -
include/Makefile.am | 14 +-
include/Makefile.in | 23 +-
include/hdf4dispatch.h | 276 ++++
include/nc3dispatch.h | 5 +-
include/nc3internal.h | 32 +-
include/nc4internal.h | 1 +
include/nc_tests.h | 1 +
include/ncdispatch.h | 10 +-
include/nchashmap.h | 113 +-
include/nclist.h | 16 +-
include/nclistmap.h | 100 ++
include/netcdf.h | 7 +-
include/netcdf_meta.h.in | 2 +-
include/onstack.h | 2 +-
install-sh | 45 +-
libdap2/Makefile.in | 126 +-
libdap2/dapdump.c | 4 +-
libdap2/dapincludes.h | 1 -
libdap2/ncd2dispatch.c | 21 +-
libdap2/ncd2dispatch.h | 6 +-
libdap4/Makefile.in | 156 +-
libdap4/d4chunk.c | 2 +-
libdap4/d4curlfunctions.c | 6 +-
libdap4/d4varx.c | 2 +-
libdap4/ncd4dispatch.c | 2 +-
libdispatch/Makefile.in | 277 +++-
libdispatch/ddim.c | 3 +-
libdispatch/derror.c | 2 +
libdispatch/dfile.c | 148 +-
libdispatch/dfilter.c | 2 +-
libdispatch/drc.c | 55 +-
libdispatch/dvar.c | 209 +--
libdispatch/ncbytes.c | 6 +-
libdispatch/nchashmap.c | 2094 +++++++++++++++++++++++--
libdispatch/nclist.c | 41 +-
libdispatch/nclistmgr.c | 5 +
libhdf4/CMakeLists.txt | 17 +
libhdf4/Makefile.am | 25 +
{libsrcp => libhdf4}/Makefile.in | 130 +-
libhdf4/hdf4attr.c | 69 +
libhdf4/hdf4dim.c | 44 +
libhdf4/hdf4dispatch.c | 134 ++
libhdf4/hdf4file.c | 713 +++++++++
libsrc4/ncfunc.c => libhdf4/hdf4func.c | 63 +-
libhdf4/hdf4grp.c | 53 +
libhdf4/hdf4type.c | 309 ++++
libhdf4/hdf4var.c | 379 +++++
liblib/CMakeLists.txt | 4 +
liblib/Makefile.am | 8 +-
liblib/Makefile.in | 68 +-
liblib/nc_initialize.c | 8 +
libnetcdf.settings.in | 2 +-
libsrc/CMakeLists.txt | 1 +
libsrc/Makefile.in | 134 +-
libsrc/attr.c | 1396 +++++++++--------
libsrc/attr.m4 | 30 +-
libsrc/nc3dispatch.c | 12 +-
libsrc/nc3internal.c | 120 +-
libsrc/posixio.c | 4 -
libsrc/putget.c | 4 -
libsrc/putget.m4 | 4 -
libsrc/v1hpg.c | 28 +-
libsrc/var.c | 115 +-
libsrc4/Makefile.in | 111 +-
libsrc4/nc4attr.c | 1055 ++++++-------
libsrc4/nc4dim.c | 211 +--
libsrc4/nc4dispatch.c | 4 +-
libsrc4/nc4file.c | 558 +------
libsrc4/nc4grp.c | 4 +-
libsrc4/nc4hdf.c | 99 +-
libsrc4/nc4internal.c | 32 +-
libsrc4/nc4var.c | 121 +-
libsrc4/ncfunc.c | 14 +-
libsrcp/Makefile.in | 51 +-
libsrcp/ncpdispatch.c | 19 +-
missing | 14 +-
nc_test/CMakeLists.txt | 2 +-
nc_test/Makefile.am | 38 +-
nc_test/Makefile.in | 397 +++--
nc_test/bad_cdf5_begin.nc | Bin 0 -> 220 bytes
nc_test/run_cdf5.sh | 6 +
nc_test/run_valgrind_tests.sh | 29 -
nc_test/test_write.c | 17 +
nc_test/test_write.m4 | 17 +
nc_test/tst_cdf5_begin.c | 56 +
nc_test/tst_def_var_fill.c | 151 ++
nc_test/tst_meta.c | 7 +
nc_test/tst_names.c | 15 +-
nc_test/tst_open_cdf5.c | 25 +
nc_test/util.c | 4 -
nc_test4/CMakeLists.txt | 21 +-
nc_test4/Makefile.am | 72 +-
nc_test4/Makefile.in | 718 +++++----
nc_test4/hdf5plugins/CMakeLists.txt | 13 +-
nc_test4/hdf5plugins/H5Zmisc.c | 11 +-
nc_test4/hdf5plugins/Makefile.am | 4 +-
nc_test4/hdf5plugins/Makefile.in | 77 +-
nc_test4/run_chunk_hdf4.sh | 26 -
nc_test4/run_hdf4_valgrind_tests.sh | 25 -
nc_test4/run_valgrind_tests.sh | 32 -
nc_test4/run_valgrind_tests2.sh | 23 -
nc_test4/test_filter_misc.c | 7 +-
nc_test4/tst_atts.c | 357 ++++-
nc_test4/tst_atts2.c | 13 +-
nc_test4/tst_chunks.c | 120 +-
nc_test4/tst_dims.c | 430 +++--
nc_test4/tst_filter.sh | 83 +-
nc_test4/tst_filterparser.c | 9 +-
nc_test4/tst_formatx_hdf4.sh | 32 -
nc_test4/tst_grps.c | 6 +-
nc_test4/tst_h5_endians.c | 4 +-
nc_test4/tst_hdf4_read_var.sh | 27 -
nc_test4/tst_nc_test_file.c | 33 -
nc_test4/tst_put_vars_two_unlim_dim.c | 1 +
nc_test4/tst_rehash.c | 3 +-
nc_test4/tst_rename.c | 147 +-
nc_test4/tst_rename2.c | 140 ++
nc_test4/tst_strings.c | 219 ++-
nc_test4/tst_types.c | 2 +-
nc_test4/tst_vars.c | 73 +-
nc_test4/tst_vars2.c | 205 ++-
ncdap_test/Makefile.in | 100 +-
ncdap_test/expected3/Makefile.in | 16 +-
ncdap_test/expectremote3/Makefile.in | 16 +-
ncdap_test/testdata3/Makefile.in | 16 +-
ncdump/Makefile.am | 4 +
ncdump/Makefile.in | 228 ++-
ncdump/cdl/Makefile.in | 16 +-
ncdump/expected/Makefile.in | 16 +-
ncdump/nccopy.c | 167 +-
ncgen/Makefile.in | 144 +-
ncgen/genbin.c | 4 +-
ncgen/genlib.c | 2 +
ncgen/ncgen.y | 18 +-
ncgen/ncgeny.c | 618 ++++----
ncgen/ncgeny.h | 2 +-
ncgen3/Makefile.in | 87 +-
nctest/Makefile.am | 8 +-
nctest/Makefile.in | 146 +-
nctest/run_valgrind_tests.sh | 28 -
oc2/Makefile.in | 124 +-
test-driver | 8 +-
test_common.in | 4 +-
206 files changed, 12461 insertions(+), 12872 deletions(-)
create mode 100644 .github/CODEOWNERS
create mode 100644 CODE_OF_CONDUCT.md
create mode 100644 docs/indexing.dox
create mode 100644 examples/C/hdf5plugins/.gitignore
delete mode 100644 examples/C/hdf5plugins/H5Zbzip2.c
delete mode 100644 examples/C/hdf5plugins/blocksort.c
delete mode 100644 examples/C/hdf5plugins/bzlib.c
delete mode 100644 examples/C/hdf5plugins/bzlib.h
delete mode 100644 examples/C/hdf5plugins/bzlib_private.h
delete mode 100644 examples/C/hdf5plugins/compress.c
delete mode 100644 examples/C/hdf5plugins/crctable.c
delete mode 100644 examples/C/hdf5plugins/decompress.c
delete mode 100644 examples/C/hdf5plugins/h5bzip2.h
delete mode 100644 examples/C/hdf5plugins/huffman.c
delete mode 100644 examples/C/hdf5plugins/randtable.c
delete mode 100755 examples/C/run_nc4_valgrind_tests.sh
delete mode 100755 examples/C/run_valgrind_tests.sh
delete mode 100755 h5_test/run_valgrind_tests.sh
create mode 100644 hdf4_test/CMakeLists.txt
create mode 100644 hdf4_test/Makefile.am
copy {nctest => hdf4_test}/Makefile.in (82%)
rename {nc_test4 => hdf4_test}/ref_chunked.hdf4 (100%)
rename {nc_test4 => hdf4_test}/ref_contiguous.hdf4 (100%)
create mode 100755 hdf4_test/run_formatx_hdf4.sh
rename {nc_test4 => hdf4_test}/run_get_hdf4_files.sh (91%)
rename {nc_test4 => hdf4_test}/tst_chunk_hdf4.c (100%)
rename {nc_test4 => hdf4_test}/tst_h4_lendian.c (99%)
rename {nc_test4 => hdf4_test}/tst_interops2.c (98%)
rename {nc_test4 => hdf4_test}/tst_interops3.c (99%)
create mode 100644 include/hdf4dispatch.h
create mode 100644 include/nclistmap.h
create mode 100644 libhdf4/CMakeLists.txt
create mode 100644 libhdf4/Makefile.am
copy {libsrcp => libhdf4}/Makefile.in (83%)
create mode 100644 libhdf4/hdf4attr.c
create mode 100644 libhdf4/hdf4dim.c
create mode 100644 libhdf4/hdf4dispatch.c
create mode 100644 libhdf4/hdf4file.c
copy libsrc4/ncfunc.c => libhdf4/hdf4func.c (52%)
create mode 100644 libhdf4/hdf4grp.c
create mode 100644 libhdf4/hdf4type.c
create mode 100644 libhdf4/hdf4var.c
create mode 100644 nc_test/bad_cdf5_begin.nc
create mode 100755 nc_test/run_cdf5.sh
delete mode 100755 nc_test/run_valgrind_tests.sh
create mode 100644 nc_test/tst_cdf5_begin.c
create mode 100644 nc_test/tst_def_var_fill.c
create mode 100644 nc_test/tst_open_cdf5.c
delete mode 100755 nc_test4/run_chunk_hdf4.sh
delete mode 100755 nc_test4/run_hdf4_valgrind_tests.sh
delete mode 100755 nc_test4/run_valgrind_tests.sh
delete mode 100755 nc_test4/run_valgrind_tests2.sh
delete mode 100755 nc_test4/tst_formatx_hdf4.sh
delete mode 100755 nc_test4/tst_hdf4_read_var.sh
delete mode 100644 nc_test4/tst_nc_test_file.c
create mode 100644 nc_test4/tst_rename2.c
delete mode 100755 nctest/run_valgrind_tests.sh
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