Bug#1066759: xarray-datatree: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13
Lucas Nussbaum
lucas at debian.org
Wed Mar 13 15:01:14 GMT 2024
Source: xarray-datatree
Version: 0.0.14-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20240313 ftbfs-trixie
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> debian/rules binary
> dh binary --buildsystem=pybuild
> dh_update_autotools_config -O--buildsystem=pybuild
> dh_autoreconf -O--buildsystem=pybuild
> dh_auto_configure -O--buildsystem=pybuild
> dh_auto_build -O--buildsystem=pybuild
> I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module
> I: pybuild base:305: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree
> * Building wheel...
> running bdist_wheel
> running build
> running build_py
> creating build
> creating build/lib
> creating build/lib/datatree
> copying datatree/__init__.py -> build/lib/datatree
> copying datatree/datatree.py -> build/lib/datatree
> copying datatree/common.py -> build/lib/datatree
> copying datatree/_version.py -> build/lib/datatree
> copying datatree/testing.py -> build/lib/datatree
> copying datatree/render.py -> build/lib/datatree
> copying datatree/io.py -> build/lib/datatree
> copying datatree/formatting_html.py -> build/lib/datatree
> copying datatree/treenode.py -> build/lib/datatree
> copying datatree/mapping.py -> build/lib/datatree
> copying datatree/ops.py -> build/lib/datatree
> copying datatree/iterators.py -> build/lib/datatree
> copying datatree/formatting.py -> build/lib/datatree
> copying datatree/extensions.py -> build/lib/datatree
> creating build/lib/datatree/tests
> copying datatree/tests/test_mapping.py -> build/lib/datatree/tests
> copying datatree/tests/__init__.py -> build/lib/datatree/tests
> copying datatree/tests/test_formatting.py -> build/lib/datatree/tests
> copying datatree/tests/test_formatting_html.py -> build/lib/datatree/tests
> copying datatree/tests/test_io.py -> build/lib/datatree/tests
> copying datatree/tests/test_datatree.py -> build/lib/datatree/tests
> copying datatree/tests/test_extensions.py -> build/lib/datatree/tests
> copying datatree/tests/test_dataset_api.py -> build/lib/datatree/tests
> copying datatree/tests/conftest.py -> build/lib/datatree/tests
> copying datatree/tests/test_version.py -> build/lib/datatree/tests
> copying datatree/tests/test_treenode.py -> build/lib/datatree/tests
> running egg_info
> creating xarray_datatree.egg-info
> writing xarray_datatree.egg-info/PKG-INFO
> writing dependency_links to xarray_datatree.egg-info/dependency_links.txt
> writing requirements to xarray_datatree.egg-info/requires.txt
> writing top-level names to xarray_datatree.egg-info/top_level.txt
> writing manifest file 'xarray_datatree.egg-info/SOURCES.txt'
> reading manifest file 'xarray_datatree.egg-info/SOURCES.txt'
> adding license file 'LICENSE'
> writing manifest file 'xarray_datatree.egg-info/SOURCES.txt'
> copying datatree/py.typed -> build/lib/datatree
> installing to build/bdist.linux-x86_64/wheel
> running install
> running install_lib
> creating build/bdist.linux-x86_64
> creating build/bdist.linux-x86_64/wheel
> creating build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/__init__.py -> build/bdist.linux-x86_64/wheel/datatree
> creating build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_mapping.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/__init__.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_formatting.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_io.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_datatree.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_extensions.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_dataset_api.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/conftest.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_version.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_treenode.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/datatree.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/common.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/_version.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/testing.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/render.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/io.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/treenode.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/py.typed -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/mapping.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/ops.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/iterators.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/formatting.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/extensions.py -> build/bdist.linux-x86_64/wheel/datatree
> running install_egg_info
> Copying xarray_datatree.egg-info to build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.egg-info
> running install_scripts
> creating build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.dist-info/WHEEL
> creating '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/.tmp-rqs6ezsl/xarray_datatree-0.0.14-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
> adding 'datatree/__init__.py'
> adding 'datatree/_version.py'
> adding 'datatree/common.py'
> adding 'datatree/datatree.py'
> adding 'datatree/extensions.py'
> adding 'datatree/formatting.py'
> adding 'datatree/formatting_html.py'
> adding 'datatree/io.py'
> adding 'datatree/iterators.py'
> adding 'datatree/mapping.py'
> adding 'datatree/ops.py'
> adding 'datatree/py.typed'
> adding 'datatree/render.py'
> adding 'datatree/testing.py'
> adding 'datatree/treenode.py'
> adding 'datatree/tests/__init__.py'
> adding 'datatree/tests/conftest.py'
> adding 'datatree/tests/test_dataset_api.py'
> adding 'datatree/tests/test_datatree.py'
> adding 'datatree/tests/test_extensions.py'
> adding 'datatree/tests/test_formatting.py'
> adding 'datatree/tests/test_formatting_html.py'
> adding 'datatree/tests/test_io.py'
> adding 'datatree/tests/test_mapping.py'
> adding 'datatree/tests/test_treenode.py'
> adding 'datatree/tests/test_version.py'
> adding 'xarray_datatree-0.0.14.dist-info/LICENSE'
> adding 'xarray_datatree-0.0.14.dist-info/METADATA'
> adding 'xarray_datatree-0.0.14.dist-info/WHEEL'
> adding 'xarray_datatree-0.0.14.dist-info/top_level.txt'
> adding 'xarray_datatree-0.0.14.dist-info/RECORD'
> removing build/bdist.linux-x86_64/wheel
> Successfully built xarray_datatree-0.0.14-py3-none-any.whl
> I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module
> I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" module
> I: pybuild base:305: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree
> * Building wheel...
> running bdist_wheel
> running build
> running build_py
> copying datatree/_version.py -> build/lib/datatree
> creating build/lib/build
> creating build/lib/build/lib
> creating build/lib/build/lib/datatree
> copying build/lib/datatree/__init__.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/datatree.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/common.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/_version.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/testing.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/render.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/io.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/formatting_html.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/treenode.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/mapping.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/ops.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/iterators.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/formatting.py -> build/lib/build/lib/datatree
> copying build/lib/datatree/extensions.py -> build/lib/build/lib/datatree
> creating build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_mapping.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/__init__.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_formatting.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_formatting_html.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_io.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_datatree.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_extensions.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_dataset_api.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/conftest.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_version.py -> build/lib/build/lib/datatree/tests
> copying build/lib/datatree/tests/test_treenode.py -> build/lib/build/lib/datatree/tests
> running egg_info
> writing xarray_datatree.egg-info/PKG-INFO
> writing dependency_links to xarray_datatree.egg-info/dependency_links.txt
> writing requirements to xarray_datatree.egg-info/requires.txt
> writing top-level names to xarray_datatree.egg-info/top_level.txt
> reading manifest file 'xarray_datatree.egg-info/SOURCES.txt'
> adding license file 'LICENSE'
> writing manifest file 'xarray_datatree.egg-info/SOURCES.txt'
> installing to build/bdist.linux-x86_64/wheel
> running install
> running install_lib
> creating build/bdist.linux-x86_64/wheel
> creating build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/__init__.py -> build/bdist.linux-x86_64/wheel/datatree
> creating build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_mapping.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/__init__.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_formatting.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_io.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_datatree.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_extensions.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_dataset_api.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/conftest.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_version.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/tests/test_treenode.py -> build/bdist.linux-x86_64/wheel/datatree/tests
> copying build/lib/datatree/datatree.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/common.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/_version.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/testing.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/render.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/io.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/treenode.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/py.typed -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/mapping.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/ops.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/iterators.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/formatting.py -> build/bdist.linux-x86_64/wheel/datatree
> copying build/lib/datatree/extensions.py -> build/bdist.linux-x86_64/wheel/datatree
> creating build/bdist.linux-x86_64/wheel/build
> creating build/bdist.linux-x86_64/wheel/build/lib
> creating build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/__init__.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> creating build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_mapping.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/__init__.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_formatting.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_formatting_html.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_io.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_datatree.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_extensions.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_dataset_api.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/conftest.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_version.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/tests/test_treenode.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
> copying build/lib/build/lib/datatree/datatree.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/common.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/_version.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/testing.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/render.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/io.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/formatting_html.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/treenode.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/mapping.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/ops.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/iterators.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/formatting.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> copying build/lib/build/lib/datatree/extensions.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
> running install_egg_info
> Copying xarray_datatree.egg-info to build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.egg-info
> running install_scripts
> creating build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.dist-info/WHEEL
> creating '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/.tmp-ubzfgbht/xarray_datatree-0.0.14-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
> adding 'build/lib/datatree/__init__.py'
> adding 'build/lib/datatree/_version.py'
> adding 'build/lib/datatree/common.py'
> adding 'build/lib/datatree/datatree.py'
> adding 'build/lib/datatree/extensions.py'
> adding 'build/lib/datatree/formatting.py'
> adding 'build/lib/datatree/formatting_html.py'
> adding 'build/lib/datatree/io.py'
> adding 'build/lib/datatree/iterators.py'
> adding 'build/lib/datatree/mapping.py'
> adding 'build/lib/datatree/ops.py'
> adding 'build/lib/datatree/render.py'
> adding 'build/lib/datatree/testing.py'
> adding 'build/lib/datatree/treenode.py'
> adding 'build/lib/datatree/tests/__init__.py'
> adding 'build/lib/datatree/tests/conftest.py'
> adding 'build/lib/datatree/tests/test_dataset_api.py'
> adding 'build/lib/datatree/tests/test_datatree.py'
> adding 'build/lib/datatree/tests/test_extensions.py'
> adding 'build/lib/datatree/tests/test_formatting.py'
> adding 'build/lib/datatree/tests/test_formatting_html.py'
> adding 'build/lib/datatree/tests/test_io.py'
> adding 'build/lib/datatree/tests/test_mapping.py'
> adding 'build/lib/datatree/tests/test_treenode.py'
> adding 'build/lib/datatree/tests/test_version.py'
> adding 'datatree/__init__.py'
> adding 'datatree/_version.py'
> adding 'datatree/common.py'
> adding 'datatree/datatree.py'
> adding 'datatree/extensions.py'
> adding 'datatree/formatting.py'
> adding 'datatree/formatting_html.py'
> adding 'datatree/io.py'
> adding 'datatree/iterators.py'
> adding 'datatree/mapping.py'
> adding 'datatree/ops.py'
> adding 'datatree/py.typed'
> adding 'datatree/render.py'
> adding 'datatree/testing.py'
> adding 'datatree/treenode.py'
> adding 'datatree/tests/__init__.py'
> adding 'datatree/tests/conftest.py'
> adding 'datatree/tests/test_dataset_api.py'
> adding 'datatree/tests/test_datatree.py'
> adding 'datatree/tests/test_extensions.py'
> adding 'datatree/tests/test_formatting.py'
> adding 'datatree/tests/test_formatting_html.py'
> adding 'datatree/tests/test_io.py'
> adding 'datatree/tests/test_mapping.py'
> adding 'datatree/tests/test_treenode.py'
> adding 'datatree/tests/test_version.py'
> adding 'xarray_datatree-0.0.14.dist-info/LICENSE'
> adding 'xarray_datatree-0.0.14.dist-info/METADATA'
> adding 'xarray_datatree-0.0.14.dist-info/WHEEL'
> adding 'xarray_datatree-0.0.14.dist-info/top_level.txt'
> adding 'xarray_datatree-0.0.14.dist-info/RECORD'
> removing build/bdist.linux-x86_64/wheel
> Successfully built xarray_datatree-0.0.14-py3-none-any.whl
> I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with "installer" module
> dh_auto_test -O--buildsystem=pybuild
> I: pybuild base:305: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build; python3.12 -m pytest --pyargs datatree
> ============================= test session starts ==============================
> platform linux -- Python 3.12.2, pytest-8.0.2, pluggy-1.4.0
> rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build
> collected 165 items
>
> datatree/tests/test_dataset_api.py ........ [ 4%]
> datatree/tests/test_datatree.py .......................xx.......x......x [ 29%]
> xx.............x............... [ 47%]
> datatree/tests/test_extensions.py . [ 48%]
> datatree/tests/test_formatting.py ........F [ 53%]
> datatree/tests/test_formatting_html.py ....... [ 58%]
> datatree/tests/test_io.py ........ [ 63%]
> datatree/tests/test_mapping.py ...................x..x....x..x [ 81%]
> datatree/tests/test_treenode.py ............................. [ 99%]
> datatree/tests/test_version.py . [100%]
>
> =================================== FAILURES ===================================
> ____________________ TestDiffFormatting.test_diff_node_data ____________________
>
> self = <datatree.tests.test_formatting.TestDiffFormatting object at 0x7f737fd1ca70>
>
> def test_diff_node_data(self):
> import numpy as np
>
> # casting to int64 explicitly ensures that int64s are created on all architectures
> ds1 = Dataset({"u": np.int64(0), "v": np.int64(1)})
> ds3 = Dataset({"w": np.int64(5)})
> dt_1 = DataTree.from_dict({"a": ds1, "a/b": ds3})
> ds2 = Dataset({"u": np.int64(0)})
> ds4 = Dataset({"w": np.int64(6)})
> dt_2 = DataTree.from_dict({"a": ds2, "a/b": ds4})
>
> expected = dedent(
> """\
> Left and right DataTree objects are not equal
>
>
> Data in nodes at position '/a' do not match:
>
> Data variables only on the left object:
> v int64 1
>
> Data in nodes at position '/a/b' do not match:
>
> Differing data variables:
> L w int64 5
> R w int64 6"""
> )
> actual = diff_tree_repr(dt_1, dt_2, "equals")
> > assert actual == expected
> E AssertionError: assert 'Left and rig... int64 8B 6' == 'Left and rig... int64 6'
> E
> E Skipping 143 identical leading characters in diff, use -v to show
> E - int64 1
> E + int64 8B 1
> E ? +++
> E
> E Data in nodes at position '/a/b' do not match:...
> E
> E ...Full output truncated (8 lines hidden), use '-vv' to show
>
> datatree/tests/test_formatting.py:120: AssertionError
> =============================== warnings summary ===============================
> ../../../../../../usr/lib/python3/dist-packages/dateutil/tz/tz.py:37
> /usr/lib/python3/dist-packages/dateutil/tz/tz.py:37: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC).
> EPOCH = datetime.datetime.utcfromtimestamp(0)
>
> ../../../../../../usr/lib/python3/dist-packages/xarray/tests/__init__.py:170
> /usr/lib/python3/dist-packages/xarray/tests/__init__.py:170: PytestUnknownMarkWarning: Unknown pytest.mark.flaky - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
> flaky = pytest.mark.flaky
>
> ../../../../../../usr/lib/python3/dist-packages/xarray/tests/__init__.py:171
> /usr/lib/python3/dist-packages/xarray/tests/__init__.py:171: PytestUnknownMarkWarning: Unknown pytest.mark.network - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
> network = pytest.mark.network
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='eeb05666-93c5-4680-8001-3a7ba0bfc6ad'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='aa9ef8d5-dc55-40cb-ae4c-04d03c95ecf7'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='2878e401-17f8-4d04-9ded-5229e3f07885'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='83a72803-b95b-4448-bf73-69dfa2ed92c7'), but file is not already closed. This may indicate a bug.
> return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='7fd85b49-1fd8-4688-afa7-d9da3fca9eb1'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='280c5d52-2ea3-4ce7-a880-05bf3295ac42'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='bf06cd1c-e1bd-47ec-b663-be4c0884189d'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='041a1e8a-2c7b-40bb-bcb3-2b3a1f768abc'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='8fcddbc6-0ddf-4bf0-99d8-0bce25306caf'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='47be72c3-8abb-41fc-b185-8a32852e1b9e'), but file is not already closed. This may indicate a bug.
> return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='943012f4-e1da-47a3-82f7-4ab0b1cb86b5'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='bce29f3f-2212-469a-9a4c-d018ace670b2'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='ef7dbd13-5dc8-47ba-939a-e92c75422eb3'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='eae7e33d-762e-4bfd-9d00-c19f5cb7d589'), but file is not already closed. This may indicate a bug.
> return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='15fd3ff6-125b-4430-a0ee-0c01df635ac5'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='91176f41-8245-4b79-b1d8-fb2560fd84e7'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/zarr/hierarchy.py:674: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='0f847e30-f2a0-46c7-af18-746506cd41af'), but file is not already closed. This may indicate a bug.
> elif recurse and contains_group(self._store, path):
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/zarr/hierarchy.py:674: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='cb67ba10-764b-4e5d-ace5-935966421e46'), but file is not already closed. This may indicate a bug.
> elif recurse and contains_group(self._store, path):
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/zarr/hierarchy.py:674: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='ae999663-03eb-4b55-b34c-b9c30821a9ff'), but file is not already closed. This may indicate a bug.
> elif recurse and contains_group(self._store, path):
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/zarr/hierarchy.py:674: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='c8205b8b-b74c-4dfd-8da1-1a4431df9208'), but file is not already closed. This may indicate a bug.
> elif recurse and contains_group(self._store, path):
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/zarr/hierarchy.py:674: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='7ee26ebf-84c7-4bf9-9f0e-5cf3e576f6e4'), but file is not already closed. This may indicate a bug.
> elif recurse and contains_group(self._store, path):
>
> datatree/tests/test_treenode.py::TestFamilyTree::test_ancestors
> datatree/tests/test_treenode.py::TestAncestry::test_ancestors
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/treenode.py:279: DeprecationWarning: `ancestors` has been deprecated, and in the future will raise an error.Please use `parents`. Example: `tuple(reversed(node.parents))`
> warn(
>
> datatree/tests/test_treenode.py::TestAncestry::test_lineage
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/treenode.py:261: DeprecationWarning: `lineage` has been deprecated, and in the future will raise an error.Please use `parents` from now on.
> warn(
>
> datatree/tests/test_treenode.py::TestAncestry::test_lineage
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/treenode.py:249: DeprecationWarning: `iter_lineage` has been deprecated, and in the future will raise an error.Please use `parents` from now on.
> warn(
>
> -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
> =========================== short test summary info ============================
> FAILED datatree/tests/test_formatting.py::TestDiffFormatting::test_diff_node_data
> ============ 1 failed, 153 passed, 11 xfailed, 28 warnings in 2.01s ============
> E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build; python3.12 -m pytest --pyargs datatree
> I: pybuild base:305: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build; python3.11 -m pytest --pyargs datatree
> ============================= test session starts ==============================
> platform linux -- Python 3.11.8, pytest-8.0.2, pluggy-1.4.0
> rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build
> collected 165 items
>
> datatree/tests/test_dataset_api.py ........ [ 4%]
> datatree/tests/test_datatree.py .......................xx.......x......x [ 29%]
> xx.............x............... [ 47%]
> datatree/tests/test_extensions.py . [ 48%]
> datatree/tests/test_formatting.py ........F [ 53%]
> datatree/tests/test_formatting_html.py ....... [ 58%]
> datatree/tests/test_io.py ........ [ 63%]
> datatree/tests/test_mapping.py ...................x..x....x..x [ 81%]
> datatree/tests/test_treenode.py ............................. [ 99%]
> datatree/tests/test_version.py . [100%]
>
> =================================== FAILURES ===================================
> ____________________ TestDiffFormatting.test_diff_node_data ____________________
>
> self = <datatree.tests.test_formatting.TestDiffFormatting object at 0x7fefe52e3750>
>
> def test_diff_node_data(self):
> import numpy as np
>
> # casting to int64 explicitly ensures that int64s are created on all architectures
> ds1 = Dataset({"u": np.int64(0), "v": np.int64(1)})
> ds3 = Dataset({"w": np.int64(5)})
> dt_1 = DataTree.from_dict({"a": ds1, "a/b": ds3})
> ds2 = Dataset({"u": np.int64(0)})
> ds4 = Dataset({"w": np.int64(6)})
> dt_2 = DataTree.from_dict({"a": ds2, "a/b": ds4})
>
> expected = dedent(
> """\
> Left and right DataTree objects are not equal
>
>
> Data in nodes at position '/a' do not match:
>
> Data variables only on the left object:
> v int64 1
>
> Data in nodes at position '/a/b' do not match:
>
> Differing data variables:
> L w int64 5
> R w int64 6"""
> )
> actual = diff_tree_repr(dt_1, dt_2, "equals")
> > assert actual == expected
> E AssertionError: assert 'Left and rig... int64 8B 6' == 'Left and rig... int64 6'
> E
> E Skipping 143 identical leading characters in diff, use -v to show
> E - int64 1
> E + int64 8B 1
> E ? +++
> E
> E Data in nodes at position '/a/b' do not match:...
> E
> E ...Full output truncated (8 lines hidden), use '-vv' to show
>
> datatree/tests/test_formatting.py:120: AssertionError
> =============================== warnings summary ===============================
> ../../../../../../usr/lib/python3/dist-packages/xarray/tests/__init__.py:170
> /usr/lib/python3/dist-packages/xarray/tests/__init__.py:170: PytestUnknownMarkWarning: Unknown pytest.mark.flaky - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
> flaky = pytest.mark.flaky
>
> ../../../../../../usr/lib/python3/dist-packages/xarray/tests/__init__.py:171
> /usr/lib/python3/dist-packages/xarray/tests/__init__.py:171: PytestUnknownMarkWarning: Unknown pytest.mark.network - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
> network = pytest.mark.network
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='c3f75c89-f459-4ed2-bd48-af5c24b39dcc'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='0f37ec45-cb90-4ce7-89e6-6eeb32d73646'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='6f2bf8e7-8ab9-4cfe-b450-204bb71ef383'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='63a2cde0-6c6e-4b55-9041-c40d751e7b15'), but file is not already closed. This may indicate a bug.
> return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='1b210e0c-5ce5-4ba3-93a0-172a7c4c4d82'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_to_netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='1754e3bd-08cd-47e5-b08c-0776bb3aaeb7'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='2123d030-10dc-43f8-a055-956cb6126b8f'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='115eb06f-41d7-4808-bb89-ed0d0035055b'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='dbe7164e-a1af-4f7d-8483-8fbbb4e11f49'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_netcdf_encoding
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='5fcb44bf-1a64-4497-b45b-8028cb50de96'), but file is not already closed. This may indicate a bug.
> return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='211a0d3c-e0c5-46d6-8347-4725735c518e'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='72ebacc1-74d5-4d38-bcb3-461052d03962'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='b086a569-383a-4610-9778-ff1352573433'), but file is not already closed. This may indicate a bug.
> new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='c3edebae-300c-4be7-9f82-4b02da0ad038'), but file is not already closed. This may indicate a bug.
> return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='a8f0239e-a450-44d1-b5e6-274f334b95d3'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_to_h5netcdf
> /usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='7e0eff14-e9bc-4916-9ccc-70ad835f0a00'), but file is not already closed. This may indicate a bug.
> self.array = as_indexable(self.array.get_duck_array())
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/xarray/core/indexes.py:1447: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='b3f0e691-00d0-4a54-af3b-5acbf09de914'), but file is not already closed. This may indicate a bug.
> unmatched_keys = set(indexes) ^ set(variables)
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/xarray/core/indexes.py:1447: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='12fae363-489c-45e1-8b8a-ab48eb001542'), but file is not already closed. This may indicate a bug.
> unmatched_keys = set(indexes) ^ set(variables)
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/xarray/core/indexes.py:1447: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='8fc2ebed-842c-434e-b29a-51f982719d80'), but file is not already closed. This may indicate a bug.
> unmatched_keys = set(indexes) ^ set(variables)
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/xarray/core/indexes.py:1447: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='10c251d6-eb3e-4c88-8b80-ca6d834ebfd6'), but file is not already closed. This may indicate a bug.
> unmatched_keys = set(indexes) ^ set(variables)
>
> datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
> /usr/lib/python3/dist-packages/xarray/core/indexes.py:1447: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-13/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='f8f704dc-464f-43e5-8774-2db6f800ae8e'), but file is not already closed. This may indicate a bug.
> unmatched_keys = set(indexes) ^ set(variables)
>
> datatree/tests/test_treenode.py::TestFamilyTree::test_ancestors
> datatree/tests/test_treenode.py::TestAncestry::test_ancestors
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/treenode.py:279: DeprecationWarning: `ancestors` has been deprecated, and in the future will raise an error.Please use `parents`. Example: `tuple(reversed(node.parents))`
> warn(
>
> datatree/tests/test_treenode.py::TestAncestry::test_lineage
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/treenode.py:261: DeprecationWarning: `lineage` has been deprecated, and in the future will raise an error.Please use `parents` from now on.
> warn(
>
> datatree/tests/test_treenode.py::TestAncestry::test_lineage
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build/datatree/treenode.py:249: DeprecationWarning: `iter_lineage` has been deprecated, and in the future will raise an error.Please use `parents` from now on.
> warn(
>
> -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
> =========================== short test summary info ============================
> FAILED datatree/tests/test_formatting.py::TestDiffFormatting::test_diff_node_data
> ============ 1 failed, 153 passed, 11 xfailed, 27 warnings in 2.29s ============
> E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/build; python3.11 -m pytest --pyargs datatree
> dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2024/03/13/xarray-datatree_0.0.14-1_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240313;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240313&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
More information about the Pkg-grass-devel
mailing list