Bug#573943: mcrl2 and groovy: error when trying to install together

Mon Mar 15 08:29:45 UTC 2010

Package: groovy,mcrl2
Version: groovy/1.7.0-3
Version: mcrl2/201001-1
Severity: serious
User: treinen at debian.org
Usertags: edos-file-overwrite

Date: 2010-03-15
Architecture: amd64
Distribution: sid

Hi,

automatic installation tests of packages that share a file and at the
same time do not conflict by their package dependency relationships has
detected the following problem:

WARNING: The following packages cannot be authenticated!
  openjdk-6-jre-lib java-common default-jre-headless ca-certificates-java
  tzdata-java libavahi-common-data libavahi-common3 libdbus-1-3
  libavahi-client3 libcups2 liblcms1 libjpeg62 libnspr4-0d libnss3-1d
  libfreetype6 openjdk-6-jre-headless libasound2 libgif4 libpng12-0
  libasyncns0 libcap2 x11-common libice6 libsm6 libogg0 libflac8 libvorbis0a
  libvorbisenc2 libsndfile1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6
  libxext6 libxi6 libxtst6 libpulse0 libxrender1 libpcre3 libglib2.0-0
  libatk1.0-0 libsysfs2 tsconf libts-0.0-0 libdirectfb-1.2-0 ucf
  ttf-dejavu-core fontconfig-config libfontconfig1 libpixman-1-0
  libxcb-render0 libxcb-render-util0 libcairo2 libgtk2.0-common libjasper1
  defoma fontconfig libpango1.0-common libdatrie1 libthai-data libthai0
  libxft2 libpango1.0-0 libtiff4 libxfixes3 libxcomposite1 libxcursor1
  libxdamage1 libxinerama1 libxrandr2 libxml2 shared-mime-info libgtk2.0-0
  default-jre libaccess-bridge-java libaccess-bridge-java-jni openjdk-6-jre
  libantlr-java antlr libasm3-java libbsf-java libclassworlds-java
  libcommons-lang-java libcommons-cli-java libcommons-logging-java
  libhamcrest-java junit4 libmockobjects-java libregexp-java
  libservlet2.4-java libjline-java libxpp3-java libxstream-java ivy groovy
  libboost-system1.41.0 libboost-filesystem1.41.0 libboost-signals1.41.0
  libboost-thread1.41.0 libdrm2 libxxf86vm1 libgl1-mesa-glx libglu1-mesa
  libwxbase2.8-0 libwxgtk2.8-0 mcrl2
W: cowdancer: unsupported operation flock, read-only open and fchown/fchmod/flock are not supported: tried openning dev:inode of 2055:5408506
W: cowdancer: unsupported operation flock, read-only open and fchown/fchmod/flock are not supported: tried openning dev:inode of 2055:5407760
W: cowdancer: unsupported operation flock, read-only open and fchown/fchmod/flock are not supported: tried openning dev:inode of 2055:5406756

Extracting templates from packages: 28%
Extracting templates from packages: 56%
Extracting templates from packages: 84%
Extracting templates from packages: 100%
Preconfiguring packages ...
Authentication warning overridden.
Can not write log, openpty() failed (/dev/pts not mounted?)
Selecting previously deselected package openjdk-6-jre-lib.
(Reading database ... 12194 files and directories currently installed.)
Unpacking openjdk-6-jre-lib (from .../openjdk-6-jre-lib_6b18~pre2-1_all.deb) ...
Selecting previously deselected package java-common.
Unpacking java-common (from .../java-common_0.34_all.deb) ...
Selecting previously deselected package default-jre-headless.
Unpacking default-jre-headless (from .../default-jre-headless_1.6-34_amd64.deb) ...
Selecting previously deselected package ca-certificates-java.
Unpacking ca-certificates-java (from .../ca-certificates-java_20091021_all.deb) ...
Selecting previously deselected package tzdata-java.
Unpacking tzdata-java (from .../tzdata-java_2010e-1_all.deb) ...
Selecting previously deselected package libavahi-common-data.
Unpacking libavahi-common-data (from .../libavahi-common-data_0.6.25-3_amd64.deb) ...
Selecting previously deselected package libavahi-common3.
Unpacking libavahi-common3 (from .../libavahi-common3_0.6.25-3_amd64.deb) ...
Selecting previously deselected package libdbus-1-3.
Unpacking libdbus-1-3 (from .../libdbus-1-3_1.2.20-2_amd64.deb) ...
Selecting previously deselected package libavahi-client3.
Unpacking libavahi-client3 (from .../libavahi-client3_0.6.25-3_amd64.deb) ...
Selecting previously deselected package libcups2.
Unpacking libcups2 (from .../libcups2_1.4.2-9.1_amd64.deb) ...
Selecting previously deselected package liblcms1.
Unpacking liblcms1 (from .../liblcms1_1.18.dfsg-1.2+b1_amd64.deb) ...
Selecting previously deselected package libjpeg62.
Unpacking libjpeg62 (from .../libjpeg62_6b-16.1_amd64.deb) ...
Selecting previously deselected package libnspr4-0d.
Unpacking libnspr4-0d (from .../libnspr4-0d_4.8.4-1_amd64.deb) ...
Selecting previously deselected package libnss3-1d.
Unpacking libnss3-1d (from .../libnss3-1d_3.12.5-2_amd64.deb) ...
Selecting previously deselected package libfreetype6.
Unpacking libfreetype6 (from .../libfreetype6_2.3.11-1_amd64.deb) ...
Selecting previously deselected package openjdk-6-jre-headless.
Unpacking openjdk-6-jre-headless (from .../openjdk-6-jre-headless_6b18~pre2-1_amd64.deb) ...
Selecting previously deselected package libasound2.
Unpacking libasound2 (from .../libasound2_1.0.22-2_amd64.deb) ...
Selecting previously deselected package libgif4.
Unpacking libgif4 (from .../libgif4_4.1.6-9_amd64.deb) ...
Selecting previously deselected package libpng12-0.
Unpacking libpng12-0 (from .../libpng12-0_1.2.43-1_amd64.deb) ...
Selecting previously deselected package libasyncns0.
Unpacking libasyncns0 (from .../libasyncns0_0.3-1_amd64.deb) ...
Selecting previously deselected package libcap2.
Unpacking libcap2 (from .../libcap2_1%3a2.17-2_amd64.deb) ...
Selecting previously deselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.5+5_all.deb) ...
W: cowdancer: unsupported operation flock, read-only open and fchown/fchmod/flock are not supported: tried openning dev:inode of 2055:5407760
Selecting previously deselected package libice6.
Unpacking libice6 (from .../libice6_2%3a1.0.6-1_amd64.deb) ...
Selecting previously deselected package libsm6.
Unpacking libsm6 (from .../libsm6_2%3a1.1.1-1_amd64.deb) ...
Selecting previously deselected package libogg0.
Unpacking libogg0 (from .../libogg0_1.1.4~dfsg-2_amd64.deb) ...
Selecting previously deselected package libflac8.
Unpacking libflac8 (from .../libflac8_1.2.1-2+b1_amd64.deb) ...
Selecting previously deselected package libvorbis0a.
Unpacking libvorbis0a (from .../libvorbis0a_1.2.3-3_amd64.deb) ...
Selecting previously deselected package libvorbisenc2.
Unpacking libvorbisenc2 (from .../libvorbisenc2_1.2.3-3_amd64.deb) ...
Selecting previously deselected package libsndfile1.
Unpacking libsndfile1 (from .../libsndfile1_1.0.21-2_amd64.deb) ...
Selecting previously deselected package libxau6.
Unpacking libxau6 (from .../libxau6_1%3a1.0.5-2_amd64.deb) ...
Selecting previously deselected package libxdmcp6.
Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.3-2_amd64.deb) ...
Selecting previously deselected package libxcb1.
Unpacking libxcb1 (from .../libxcb1_1.5-3_amd64.deb) ...
Selecting previously deselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.3.3-2_all.deb) ...
Selecting previously deselected package libx11-6.
Unpacking libx11-6 (from .../libx11-6_2%3a1.3.3-2_amd64.deb) ...
Selecting previously deselected package libxext6.
Unpacking libxext6 (from .../libxext6_2%3a1.1.1-3_amd64.deb) ...
Selecting previously deselected package libxi6.
Unpacking libxi6 (from .../libxi6_2%3a1.3-3_amd64.deb) ...
Selecting previously deselected package libxtst6.
Unpacking libxtst6 (from .../libxtst6_2%3a1.1.0-2_amd64.deb) ...
Selecting previously deselected package libpulse0.
Unpacking libpulse0 (from .../libpulse0_0.9.21-1_amd64.deb) ...
Selecting previously deselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.5-2_amd64.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_7.8-3_amd64.deb) ...
Selecting previously deselected package libglib2.0-0.
Unpacking libglib2.0-0 (from .../libglib2.0-0_2.22.4-1_amd64.deb) ...
Selecting previously deselected package libatk1.0-0.
Unpacking libatk1.0-0 (from .../libatk1.0-0_1.28.0-1_amd64.deb) ...
Selecting previously deselected package libsysfs2.
Unpacking libsysfs2 (from .../libsysfs2_2.1.0-6_amd64.deb) ...
Selecting previously deselected package tsconf.
Unpacking tsconf (from .../archives/tsconf_1.0-7_all.deb) ...
Selecting previously deselected package libts-0.0-0.
Unpacking libts-0.0-0 (from .../libts-0.0-0_1.0-7_amd64.deb) ...
Selecting previously deselected package libdirectfb-1.2-0.
Unpacking libdirectfb-1.2-0 (from .../libdirectfb-1.2-0_1.2.10really1.2.8-1+b1_amd64.deb) ...
Selecting previously deselected package ucf.
Unpacking ucf (from .../archives/ucf_3.0025_all.deb) ...
Moving old data out of the way
Selecting previously deselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.30-2_all.deb) ...
Selecting previously deselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-2_all.deb) ...
Selecting previously deselected package libfontconfig1.
Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-2_amd64.deb) ...
Selecting previously deselected package libpixman-1-0.
Unpacking libpixman-1-0 (from .../libpixman-1-0_0.16.4-1_amd64.deb) ...
Selecting previously deselected package libxcb-render0.
Unpacking libxcb-render0 (from .../libxcb-render0_1.5-3_amd64.deb) ...
Selecting previously deselected package libxcb-render-util0.
Unpacking libxcb-render-util0 (from .../libxcb-render-util0_0.3.6-1_amd64.deb) ...
Selecting previously deselected package libcairo2.
Unpacking libcairo2 (from .../libcairo2_1.8.10-2_amd64.deb) ...
Selecting previously deselected package libgtk2.0-common.
Unpacking libgtk2.0-common (from .../libgtk2.0-common_2.18.7-1_all.deb) ...
Selecting previously deselected package libjasper1.
Unpacking libjasper1 (from .../libjasper1_1.900.1-7_amd64.deb) ...
Selecting previously deselected package defoma.
Unpacking defoma (from .../defoma_0.11.10-4_all.deb) ...
Selecting previously deselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-2_amd64.deb) ...
Selecting previously deselected package libpango1.0-common.
Unpacking libpango1.0-common (from .../libpango1.0-common_1.26.2-1_all.deb) ...
Selecting previously deselected package libdatrie1.
Unpacking libdatrie1 (from .../libdatrie1_0.2.3-1_amd64.deb) ...
Selecting previously deselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.14-2_all.deb) ...
Selecting previously deselected package libthai0.
Unpacking libthai0 (from .../libthai0_0.1.14-2_amd64.deb) ...
Selecting previously deselected package libxft2.
Unpacking libxft2 (from .../libxft2_2.1.14-2_amd64.deb) ...
Selecting previously deselected package libpango1.0-0.
Unpacking libpango1.0-0 (from .../libpango1.0-0_1.26.2-1_amd64.deb) ...
Selecting previously deselected package libtiff4.
Unpacking libtiff4 (from .../libtiff4_3.9.2-3+b1_amd64.deb) ...
Selecting previously deselected package libxfixes3.
Unpacking libxfixes3 (from .../libxfixes3_1%3a4.0.4-2_amd64.deb) ...
Selecting previously deselected package libxcomposite1.
Unpacking libxcomposite1 (from .../libxcomposite1_1%3a0.4.1-1_amd64.deb) ...
Selecting previously deselected package libxcursor1.
Unpacking libxcursor1 (from .../libxcursor1_1%3a1.1.10-2_amd64.deb) ...
Selecting previously deselected package libxdamage1.
Unpacking libxdamage1 (from .../libxdamage1_1%3a1.1.2-1_amd64.deb) ...
Selecting previously deselected package libxinerama1.
Unpacking libxinerama1 (from .../libxinerama1_2%3a1.1-3_amd64.deb) ...
Selecting previously deselected package libxrandr2.
Unpacking libxrandr2 (from .../libxrandr2_2%3a1.3.0-3_amd64.deb) ...
Selecting previously deselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.6.dfsg-2+b1_amd64.deb) ...
Selecting previously deselected package shared-mime-info.
Unpacking shared-mime-info (from .../shared-mime-info_0.71-1_amd64.deb) ...
Selecting previously deselected package libgtk2.0-0.
Unpacking libgtk2.0-0 (from .../libgtk2.0-0_2.18.7-1_amd64.deb) ...
Selecting previously deselected package default-jre.
Unpacking default-jre (from .../default-jre_1.6-34_amd64.deb) ...
Selecting previously deselected package libaccess-bridge-java.
Unpacking libaccess-bridge-java (from .../libaccess-bridge-java_1.26.2-4_all.deb) ...
Selecting previously deselected package libaccess-bridge-java-jni.
Unpacking libaccess-bridge-java-jni (from .../libaccess-bridge-java-jni_1.26.2-4_amd64.deb) ...
Selecting previously deselected package openjdk-6-jre.
Unpacking openjdk-6-jre (from .../openjdk-6-jre_6b18~pre2-1_amd64.deb) ...
Selecting previously deselected package libantlr-java.
Unpacking libantlr-java (from .../libantlr-java_2.7.7-15_all.deb) ...
Selecting previously deselected package antlr.
Unpacking antlr (from .../antlr_2.7.7-15_all.deb) ...
Selecting previously deselected package libasm3-java.
Unpacking libasm3-java (from .../libasm3-java_3.2-3_all.deb) ...
Selecting previously deselected package libbsf-java.
Unpacking libbsf-java (from .../libbsf-java_1%3a2.4.0-3_all.deb) ...
Selecting previously deselected package libclassworlds-java.
Unpacking libclassworlds-java (from .../libclassworlds-java_1.1-final-4_all.deb) ...
Selecting previously deselected package libcommons-lang-java.
Unpacking libcommons-lang-java (from .../libcommons-lang-java_2.4-4_all.deb) ...
Selecting previously deselected package libcommons-cli-java.
Unpacking libcommons-cli-java (from .../libcommons-cli-java_1.2-2_all.deb) ...
Selecting previously deselected package libcommons-logging-java.
Unpacking libcommons-logging-java (from .../libcommons-logging-java_1.1.1-6_all.deb) ...
Selecting previously deselected package libhamcrest-java.
Unpacking libhamcrest-java (from .../libhamcrest-java_1.1-5_all.deb) ...
Selecting previously deselected package junit4.
Unpacking junit4 (from .../junit4_4.8.1-3_all.deb) ...
Selecting previously deselected package libmockobjects-java.
Unpacking libmockobjects-java (from .../libmockobjects-java_0.09-3_all.deb) ...
Selecting previously deselected package libregexp-java.
Unpacking libregexp-java (from .../libregexp-java_1.5-2_all.deb) ...
Selecting previously deselected package libservlet2.4-java.
Unpacking libservlet2.4-java (from .../libservlet2.4-java_5.0.30-12_all.deb) ...
Selecting previously deselected package libjline-java.
Unpacking libjline-java (from .../libjline-java_0.9.94-5_all.deb) ...
Selecting previously deselected package libxpp3-java.
Unpacking libxpp3-java (from .../libxpp3-java_1.1.4c-1_all.deb) ...
Selecting previously deselected package libxstream-java.
Unpacking libxstream-java (from .../libxstream-java_1.3.1-6_all.deb) ...
Selecting previously deselected package ivy.
Unpacking ivy (from .../archives/ivy_2.1.0-1_all.deb) ...
Selecting previously deselected package groovy.
Unpacking groovy (from .../groovy_1.7.0-3_all.deb) ...
Selecting previously deselected package libboost-system1.41.0.
Unpacking libboost-system1.41.0 (from .../libboost-system1.41.0_1.41.0-3+b1_amd64.deb) ...
Selecting previously deselected package libboost-filesystem1.41.0.
Unpacking libboost-filesystem1.41.0 (from .../libboost-filesystem1.41.0_1.41.0-3+b1_amd64.deb) ...
Selecting previously deselected package libboost-signals1.41.0.
Unpacking libboost-signals1.41.0 (from .../libboost-signals1.41.0_1.41.0-3+b1_amd64.deb) ...
Selecting previously deselected package libboost-thread1.41.0.
Unpacking libboost-thread1.41.0 (from .../libboost-thread1.41.0_1.41.0-3+b1_amd64.deb) ...
Selecting previously deselected package libdrm2.
Unpacking libdrm2 (from .../libdrm2_2.4.18-2_amd64.deb) ...
Selecting previously deselected package libxxf86vm1.
Unpacking libxxf86vm1 (from .../libxxf86vm1_1%3a1.1.0-2_amd64.deb) ...
Selecting previously deselected package libgl1-mesa-glx.
Unpacking libgl1-mesa-glx (from .../libgl1-mesa-glx_7.7-4_amd64.deb) ...
Selecting previously deselected package libglu1-mesa.
Unpacking libglu1-mesa (from .../libglu1-mesa_7.7-4_amd64.deb) ...
Selecting previously deselected package libwxbase2.8-0.
Unpacking libwxbase2.8-0 (from .../libwxbase2.8-0_2.8.10.1-3_amd64.deb) ...
Selecting previously deselected package libwxgtk2.8-0.
Unpacking libwxgtk2.8-0 (from .../libwxgtk2.8-0_2.8.10.1-3_amd64.deb) ...
Selecting previously deselected package mcrl2.
Unpacking mcrl2 (from .../mcrl2_201001-1_amd64.deb) ...
dpkg: error processing /var/cache/apt/archives/mcrl2_201001-1_amd64.deb (--unpack):
 trying to overwrite '/usr/bin/grape', which is also in package groovy 0:1.7.0-3
dpkg-deb: subprocess paste killed by signal (Broken pipe)
Processing triggers for man-db ...
W: cowdancer: unsupported operation flock, read-only open and fchown/fchmod/flock are not supported: tried openning dev:inode of 2055:5407760
Errors were encountered while processing:
 /var/cache/apt/archives/mcrl2_201001-1_amd64.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)

This is a serious bug as it makes installation fail, and violates
sections 7.6.1 and 10.1 of the policy. An optimal solution would
consist in only one of the packages installing that file, and renaming
or removing the file in the other package. Depending on the
circumstances you might also consider Replace relations or file
diversions. If the conflicting situation cannot be resolved then, as a
last resort, the two packages have to declare a mutual
Conflict. Please take into account that Replaces, Conflicts and
diversions should only be used when packages provide different
implementations for the same functionality.

Here is a list of files that are known to be shared by both packages
(according to the Contents file for sid/amd64, which may be
slightly out of sync):

  /usr/bin/grape

This bug is assigned to both packages. If you, the maintainers of
the two packages in question, have agreed on which of the packages will
resolve the problem please reassign the bug to that package.

-Ralf.

PS: for more information about the detection of file overwrite errors
of this kind see http://edos.debian.net/file-overwrites/.