Bug#627523: libcdk-java should depend on libstdc++5, so that the InChI part works

Egon Willighagen egon.willighagen at gmail.com
Sat May 21 14:12:58 UTC 2011


Package: libcdk-java
Version: 1:1.2.8-1
Severity: normal

The jni-inchi functionality used in the cdk-inchi.jar requires the libstdc++5 package
to be installed, to provide libstdc++.so.5, because you otherwise run into this
exception:

Caused by: java.lang.UnsatisfiedLinkError: /home/egonw/.jnati/repo/jniinchi/1.6/LINUX-X86/libJniInchi-1.6-LINUX-X86.so: libstdc++.so.5: canno
t open shared object file: No such file or directory
        at java.lang.ClassLoader$NativeLibrary.load(Native Method)
        at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1750)
        at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1646)
        at java.lang.Runtime.load0(Runtime.java:787)
        at java.lang.System.load(System.java:1022)
        at net.sf.jnati.deploy.NativeLibraryLoader.loadLibrary(NativeLibraryLoader.java:48)

(This is new in 1.2)

Egon


-- System Information:
Debian Release: wheezy/sid
  APT prefers testing
  APT policy: (500, 'testing'), (300, 'unstable')
Architecture: i386 (i686)

Kernel: Linux 2.6.38-2-686-bigmem (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages libcdk-java depends on:
ii  default-jre-headless [java5 1:1.6-40     Standard Java or Java compatible R
ii  gcj-4.4-jre-headless [java5 4.4.6-2      Java runtime environment using GIJ
ii  gcj-jre-headless [java5-run 4:4.4.5-4    Java runtime environment using GIJ
ii  openjdk-6-jre-headless [jav 6b18-1.8.7-2 OpenJDK Java runtime, using Hotspo
ii  sun-java6-jre [java5-runtim 6.24-2       Sun Java(TM) Runtime Environment (

libcdk-java recommends no packages.

Versions of packages libcdk-java suggests:
pn  jchempaint                    <none>     (no description available)
ii  jmol                          12.0.40-1  Molecular Viewer

-- no debconf information





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