[Pkg-scicomp-devel] Bug#529970:

Adam C Powell IV hazelsct at debian.org
Thu Jun 18 12:34:03 UTC 2009


Excellent!  When I get a chance I'll make a p5->p6 patch and try again.

Hmm, that may need to wait until after the openmpi transition though...

Thanks for the report/request!

-Adam

On Thu, 2009-06-18 at 12:18 +0100, Kramer, Stephan wrote:
> Ah yes, it has unfortunately been broken for some patchlevels (including p5 used by the current package) - see http://lists.mcs.anl.gov/pipermail/petsc-users/2009-June/004561.html.
> 
> I've just tried the following: download 3.0.0-p6, copying in the debian/ directory from the current source package, removing upstream-p5.patch, adding --with-fortran-interfaces=1 to the configure lines in debian/rules, and the package now builds fine. I'm using gfortran 4.3 on  Debian unstable.
> 
> Thanks, for looking into this. Let me know if I can do anything more
> 
> Cheers
> Stephan
> 
> Adam C Powell IV wrote:
> > Hello and thanks for your report.
> > 
> > On Fri, 2009-05-22 at 15:18 +0100, Stephan Kramer wrote:
> >> Package: libpetsc3.0.0-dev
> >> Version: 3.0.0.dfsg-4
> >> Severity: wishlist
> >>
> >> One of the great things of PETSc 3 is that it include explicit fortran
> >> interfaces for most routine. By default however only the routines that
> >> use f90 extenstions, like VecGetArrayF90, IsGetIndicesF90, etc., are
> >> included. To include fortran interfaces for most other routines, PETSc
> >> has to be configured with --with-fortran-interfaces=1.
> > 
> > I'm afraid I just tried this, but it threw a bunch of errors like:
> > 
> > libfast in: /home/hazelsct/petsc-3.0.0.dfsg/src/ksp/f90-mod
> > mpif90 -c  -Wall -Wno-unused-variable -g   -I/home/hazelsct/petsc-3.0.0.dfsg/linux-gnu-c-debug/include -I/home/hazelsct/petsc-3.0.0.dfsg/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/lib -I/usr/include/spooles -I/usr/include -I/usr/include/superlu -I/usr/include/suitesparse -I/usr/include/scotch       -o petsckspmod.o petsckspmod.F
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:120.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:125.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:265.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:322.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:367.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:385.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:391.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/ftn-auto/petscpc.h90:397.7:
> >     Included at /home/hazelsct/petsc-3.0.0.dfsg/include/finclude/petscpc.h90:10:
> >     Included at petsckspmod.F:12:
> > 
> >        KSP ksp ! KSP                                                    
> >        1
> > Error: Unclassifiable statement at (1)
> > petsckspmod.F:15.72:
> > 
> >         use petscpc                                                     
> >                                                                         1
> > Fatal Error: Can't open module file 'petscpc.mod' for reading at (1): No such file or directory
> > make[8]: [petsckspmod.o] Error 1 (ignored)
> > /usr/bin/ar cr /home/hazelsct/petsc-3.0.0.dfsg/linux-gnu-c-debug/lib/libpetscksp.a petsckspmod.o
> > /usr/bin/ar: petsckspmod.o: No such file or directory
> > make[8]: [libf] Error 1 (ignored)
> > 
> > Can you confirm that this option works, and if so, with what compiler
> > versions?  I don't know much about .mod files, so I'll need your help to
> > fulfill this request.
> > 
> > Thanks,
> > -Adam
-- 
GPG fingerprint: D54D 1AEE B11C CE9B A02B  C5DD 526F 01E8 564E E4B6

Engineering consulting with open source tools
http://www.opennovation.com/
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: application/pgp-signature
Size: 189 bytes
Desc: This is a digitally signed message part
URL: <http://lists.alioth.debian.org/pipermail/pkg-scicomp-devel/attachments/20090618/aaac11fa/attachment.pgp>


More information about the Pkg-scicomp-devel mailing list