[Qa-jenkins-scm] Build failed in Jenkins: reproducible_builder_amd64_17 #11350
jenkins at jenkins.debian.net
jenkins at jenkins.debian.net
Thu Dec 10 00:56:53 UTC 2015
See <https://jenkins.debian.net/job/reproducible_builder_amd64_17/11350/>
------------------------------------------
[...truncated 7357 lines...]
+Elapsed time: 26.843053 seconds
--------------------------------------------------------------------------------
-Total elapsed time: 103.790531 seconds
+Total elapsed time: 127.102705 seconds
Test results have been logged
--------------------------------------------------------------------------------
Running tests for point-pmf section
@@ -1386,33 +1399,33 @@
Testing computed result 1.830820799027E+01 against expected result 1.830821E+01
*** PASSED ***
-Elapsed time: 3.957470 seconds
+Elapsed time: 6.683630 seconds
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Testing input file complex-0_2.in
Testing computed result 8.906694086750E+00 against expected result 8.906694E+00
*** PASSED ***
-Elapsed time: 3.418291 seconds
+Elapsed time: 8.367012 seconds
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Testing input file complex-0_3.in
Testing computed result 5.909599816984E+00 against expected result 5.909600E+00
*** PASSED ***
-Elapsed time: 4.571177 seconds
+Elapsed time: 7.593140 seconds
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Testing input file complex-0_4.in
Testing computed result 4.430144947418E+00 against expected result 4.430145E+00
*** PASSED ***
-Elapsed time: 1.874128 seconds
+Elapsed time: 9.228937 seconds
--------------------------------------------------------------------------------
-Total elapsed time: 13.821066 seconds
+Total elapsed time: 31.872719 seconds
Test results have been logged
--------------------------------------------------------------------------------
-Running tests for solvasc_getToken: Error occurred (bailing out).
+Running tests forasc_getToken: Error occurred (bailing out).
Vio_scanf: Format problem with input.
asc_getToken: Error occurred (bailing out).
Vio_scanf: Format problem with input.
@@ -1420,7 +1433,7 @@
Vio_scanf: Format problem with input.
asc_getToken: Error occurred (bailing out).
Vio_scanf: Format problem with input.
- section
+ solv section
--------------------------------------------------------------------------------
Testing input file apbs-mol.in
@@ -1432,7 +1445,7 @@
Expected result is -3.904121000000e+02 (0.005% error)
Testing computed result -3.541635359318E+02 against expected result -3.541635E+02
*** PASSED ***
-Elapsed time: 5.271610 seconds
+Elapsed time: 12.134509 seconds
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Testing input file apbs-smol.in
@@ -1445,9 +1458,9 @@
Expected result is -3.912388000000e+02 (0.005% error)
Testing computed result -3.536629226599E+02 against expected result -3.536629E+02
*** PASSED ***
-Elapsed time: 4.956520 seconds
+Elapsed time: 11.640549 seconds
--------------------------------------------------------------------------------
-Total elapsed time: 10.228130 seconds
+Total elapsed time: 23.775058 seconds
Test results have been logged
--------------------------------------------------------------------------------
make[1]: Leaving directory '/build/apbs-1.4'
@@ -1456,7 +1469,7 @@
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/apbs-1.4'
dh_auto_install --destdir=/build/apbs-1.4/debian/tmp/
- make -j18 install DESTDIR=/build/apbs-1.4/debian/tmp AM_UPDATE_INFO_DIR=no
+ make -j17 install DESTDIR=/build/apbs-1.4/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
/usr/bin/cmake -H/build/apbs-1.4 -B/build/apbs-1.4/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/apbs-1.4/obj-x86_64-linux-gnu/CMakeFiles /build/apbs-1.4/obj-x86_64-linux-gnu/CMakeFiles/progress.marks
@@ -1470,11 +1483,11 @@
cd /build/apbs-1.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-1.4 /build/apbs-1.4/src/pmgc /build/apbs-1.4/obj-x86_64-linux-gnu /build/apbs-1.4/obj-x86_64-linux-gnu/src/pmgc /build/apbs-1.4/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
make -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/build
-make[4]: Leaving directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
-make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build
make[4]: Entering directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'src/generic/CMakeFiles/apbs_generic.dir/build'.
make[4]: Leaving directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
+make[4]: Leaving directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
+make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build
make[4]: Entering directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'src/pmgc/CMakeFiles/apbs_pmgc.dir/build'.
make[4]: Leaving directory '/build/apbs-1.4/obj-x86_64-linux-gnu'
@@ -2812,29 +2825,78 @@
dh_strip -O--parallel
dh_makeshlibs -O--parallel
dh_shlibdeps -O--parallel
-dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/bin/apbs was not linked against libpthread.so.0 (it uses none of the library's symbols)
+dpkg-shlibdeps: avertissement: la dépendance pourrait être évitée si « debian/apbs/usr/bin/apbs » n'y était pas lié avec libpthread.so.0 sans nécessité (il n'utilise aucun des symboles de la bibliothèque)
dh_installdeb -O--parallel
dh_gencontrol -O--parallel
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
-dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
+dpkg-gencontrol: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
dh_md5sums -O--parallel
dh_builddeb -O--parallel
-dpkg-deb: building package 'apbs-dbgsym' in '../apbs-dbgsym_1.4-1_amd64.deb'.
-dpkg-deb: building package 'apbs' in '../apbs_1.4-1_amd64.deb'.
+dpkg-deb : construction du paquet « apbs-dbgsym » dans « ../apbs-dbgsym_1.4-1_amd64.deb ».
+dpkg-deb : construction du paquet « apbs » dans « ../apbs_1.4-1_amd64.deb ».
dpkg-genbuildinfo >../apbs_1.4-1_amd64.buildinfo
dpkg-distaddfile apbs_1.4-1_amd64.buildinfo science optional
-dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe
+dpkg-distaddfile: avertissement: Fichier::FcntlLock non disponible; utilisation de « flock » qui n'est pas sécurisé pour NFS
dpkg-genchanges -b >../apbs_1.4-1_amd64.changes
-dpkg-genchanges: warning: package apbs-dbgsym listed in files list but not in control info
-dpkg-genchanges: binary-only upload (no source code included)
+dpkg-genchanges: avertissement: paquet apbs-dbgsym listé dans le fichier de liste des fichiers mais pas dans le fichier info
+dpkg-genchanges: envoi des binaires seulement (le code source n'est pas inclus)
dpkg-source --after-build apbs-1.4
-dpkg-buildpackage: binary-only upload (no source included)
+dpkg-buildpackage: envoi d'un binaire seulement (aucune inclusion de code source)
+I: user script /srv/workspace/pbuilder/29615/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/29615/tmp/hooks/B01_cleanup finished
+perl: warning: Setting locale failed.
+perl: warning: Please check that your locale settings:
+ LANGUAGE = (unset),
+ LC_ALL = "fr_CH.UTF-8",
+ LANG = "fr_CH.UTF-8"
+ are supported and installed on your system.
+perl: warning: Falling back to the standard locale ("C").
+perl: warning: Setting locale failed.
+perl: warning: Please check that your locale settings:
+ LANGUAGE = (unset),
+ LC_ALL = "fr_CH.UTF-8",
+ LANG = "fr_CH.UTF-8"
+ are supported and installed on your system.
+perl: warning: Falling back to the standard locale ("C").
I: unmounting /sys filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 164: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
+perl: warning: Setting locale failed.
+perl: warning: Please check that your locale settings:
+ LANGUAGE = (unset),
+ LC_ALL = "fr_CH.UTF-8",
+ LANG = "fr_CH.UTF-8"
+ are supported and installed on your system.
+perl: warning: Falling back to the standard locale ("C").
I: unmounting /dev/shm filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 164: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
+perl: warning: Setting locale failed.
+perl: warning: Please check that your locale settings:
+ LANGUAGE = (unset),
+ LC_ALL = "fr_CH.UTF-8",
+ LANG = "fr_CH.UTF-8"
+ are supported and installed on your system.
+perl: warning: Falling back to the standard locale ("C").
I: unmounting dev/pts filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 164: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
+perl: warning: Setting locale failed.
+perl: warning: Please check that your locale settings:
+ LANGUAGE = (unset),
+ LC_ALL = "fr_CH.UTF-8",
+ LANG = "fr_CH.UTF-8"
+ are supported and installed on your system.
+perl: warning: Falling back to the standard locale ("C").
I: unmounting run/shm filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 164: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
+perl: warning: Setting locale failed.
+perl: warning: Please check that your locale settings:
+ LANGUAGE = (unset),
+ LC_ALL = "fr_CH.UTF-8",
+ LANG = "fr_CH.UTF-8"
+ are supported and installed on your system.
+perl: warning: Falling back to the standard locale ("C").
I: unmounting proc filesystem
+/usr/lib/pbuilder/pbuilder-modules: line 164: warning: setlocale: LC_ALL: cannot change locale (fr_CH.UTF-8)
I: cleaning the build env
-I: removing directory /srv/workspace/pbuilder/59007 and its subdirectories
-I: Current time: Wed Dec 9 12:42:50 GMT+12 2015
-I: pbuilder-time-stamp: 1449708170
+I: removing directory /srv/workspace/pbuilder/29615 and its subdirectories
+I: Current time: Wed Jan 11 21:19:30 GMT-14 2017
+I: pbuilder-time-stamp: 1484119170
Compressing the 2nd log...
/var/lib/jenkins/userContent/reproducible/logdiffs/testing/amd64/apbs_1.4-1.diff: 86.8% -- replaced with /var/lib/jenkins/userContent/reproducible/logdiffs/testing/amd64/apbs_1.4-1.diff.gz
b2/build.log: 91.5%
+ echo 'Compressing the 1st log...'
Compressing the 1st log...
+ gzip -9cvn b1/build.log
b1/build.log: 91.7%
+ chmod 644 /var/lib/jenkins/userContent/reproducible/logs/testing/amd64/apbs_1.4-1.build1.log.gz
+ update_rbuildlog
+ chmod 644 /srv/reproducible-results/tmp.YItNzdnPXf/tmp.Un8gxZLusR
+ mv /srv/reproducible-results/tmp.YItNzdnPXf/tmp.Un8gxZLusR /var/lib/jenkins/userContent/reproducible/rbuild/testing/amd64/apbs_1.4-1.rbuild.log
+ RBUILDLOG=/var/lib/jenkins/userContent/reproducible/rbuild/testing/amd64/apbs_1.4-1.rbuild.log
+ '[' 0 -eq 1 ']'
+ '[' 0 -eq 0 ']'
+ call_diffoscope_on_changes_files
++ mktemp --tmpdir=/srv/reproducible-results/tmp.YItNzdnPXf
+ local TMPLOG=/srv/reproducible-results/tmp.YItNzdnPXf/tmp.bgRhIUDTSf
+ echo
+ tee -a /var/lib/jenkins/userContent/reproducible/rbuild/testing/amd64/apbs_1.4-1.rbuild.log
+ local TIMEOUT=30m
+ DBDSUITE=testing
+ '[' testing = experimental ']'
+ set -x
++ mktemp --tmpdir=/srv/reproducible-results/tmp.YItNzdnPXf -d dbd-tmp-XXXXXXX
+ local TEMP=/srv/reproducible-results/tmp.YItNzdnPXf/dbd-tmp-KxwcKZ2
++ schroot --directory /srv/reproducible-results/tmp.YItNzdnPXf -c source:jenkins-reproducible-testing-diffoscope diffoscope -- --version
+ DIFFOSCOPE='diffoscope 42'
++ echo diffoscope 42
++ grep '^E: 15binfmt: update-binfmts: unable to open'
++ true
+ LOG_RESULT=
+ '[' '!' -z '' ']'
+ tee -a /var/lib/jenkins/userContent/reproducible/rbuild/testing/amd64/apbs_1.4-1.rbuild.log
++ date -u
+ echo 'Thu Dec 10 00:56:34 UTC 2015 - diffoscope 42 will be used to compare the two builds:'
Thu Dec 10 00:56:34 UTC 2015 - diffoscope 42 will be used to compare the two builds:
+ set +e
+ set -x
+ timeout 30m schroot --directory /srv/reproducible-results/tmp.YItNzdnPXf -c source:jenkins-reproducible-testing-diffoscope -- sh -c 'export TMPDIR=/srv/reproducible-results/tmp.YItNzdnPXf/dbd-tmp-KxwcKZ2 ; diffoscope --html /srv/reproducible-results/tmp.YItNzdnPXf/apbs_1.4-1.diffoscope.html --text /srv/reproducible-results/tmp.YItNzdnPXf/apbs_1.4-1.diffoscope.txt /srv/reproducible-results/tmp.YItNzdnPXf/b1/apbs_1.4-1_amd64.changes /srv/reproducible-results/tmp.YItNzdnPXf/b2/apbs_1.4-1_amd64.changes'
+ RESULT=1
++ grep '^E: 15binfmt: update-binfmts: unable to open' /srv/reproducible-results/tmp.YItNzdnPXf/tmp.bgRhIUDTSf
++ true
+ LOG_RESULT=
+ '[' '!' -z '' ']'
+ false
+ set +x
Thu Dec 10 00:56:52 UTC 2015 - apbs failed to build reproducibly in testing on amd64.
Error: near "unreproducible": syntax error
Error: near "unreproducible": syntax error
/var/lib/jenkins/userContent/reproducible/rbuild/testing/amd64/apbs_1.4-1.rbuild.log: 91.0% -- replaced with /var/lib/jenkins/userContent/reproducible/rbuild/testing/amd64/apbs_1.4-1.rbuild.log.gz
INFO: Starting at 2015-12-10 00:56:53.035181
INFO: Finished at 2015-12-10 00:56:53.040727, took: 0:00:00.005552
Thu 10 Dec 00:56:53 UTC 2015 - /srv/jenkins/bin/reproducible_build.sh stopped running as /tmp/jenkins-script-M2QcTvtx, which will now be removed.
Build step 'Execute shell' marked build as failure
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