I: using fakeroot in build. I: pbuilder: network access will be disabled during build I: Current time: Thu Sep 10 15:18:40 GMT+12 2015 I: pbuilder-time-stamp: 1441941520 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: creating local configuration I: copying local configuration I: mounting /proc filesystem I: mounting /run/shm filesystem I: mounting /dev/pts filesystem I: Mounting /dev/shm I: Mounting /sys I: policy-rc.d already exists I: Installing the build-deps -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9), cython, libnetcdf-dev, python-all-dev, python-numpy, python-netcdf, python-scientific, python-sphinx (>= 1.0.7+dfsg) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20260 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cython; however: Package cython is not installed. pbuilder-satisfydepends-dummy depends on libnetcdf-dev; however: Package libnetcdf-dev is not installed. pbuilder-satisfydepends-dummy depends on python-all-dev; however: Package python-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python-numpy; however: Package python-numpy is not installed. pbuilder-satisfydepends-dummy depends on python-netcdf; however: Package python-netcdf is not installed. pbuilder-satisfydepends-dummy depends on python-scientific; however: Package python-scientific is not installed. pbuilder-satisfydepends-dummy depends on python-sphinx (>= 1.0.7+dfsg); however: Package python-sphinx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: cython{a} docutils-common{a} fonts-font-awesome{a} fonts-lato{a} hdf5-helpers{a} libblas-common{a} libblas3{a} libcurl3-gnutls{a} libcurl4-gnutls-dev{a} libexpat1{a} libexpat1-dev{a} libgfortran3{a} libgnutls-deb0-28{a} libgssapi-krb5-2{a} libhdf5-8{a} libhdf5-cpp-8{a} libhdf5-dev{a} libhogweed4{a} libidn11{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-modernizr{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap-2.4-2{a} libnetcdf-dev{a} libnetcdf7{a} libnetcdfc7{a} libnettle6{a} libp11-kit0{a} libpython-all-dev{a} libpython-dev{a} libpython-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libssl1.0.0{a} libtasn1-6{a} mime-support{a} python{a} python-alabaster{a} python-all{a} python-all-dev{a} python-babel{a} python-babel-localedata{a} python-dev{a} python-docutils{a} python-jinja2{a} python-markupsafe{a} python-minimal{a} python-netcdf{a} python-numpy{a} python-pkg-resources{a} python-pygments{a} python-roman{a} python-scientific{a} python-six{a} python-sphinx{a} python-sphinx-rtd-theme{a} python-tz{a} python2.7{a} python2.7-dev{a} python2.7-minimal{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} xml-core{a} zlib1g-dev{a} 0 packages upgraded, 80 newly installed, 0 to remove and 0 not upgraded. Need to get 50.2 MB of archives. After unpacking 167 MB will be used. Writing extended state information... Get: 1 http://ftp.de.debian.org/debian/ unstable/main libnettle6 amd64 3.1.1-4 [189 kB] Get: 2 http://ftp.de.debian.org/debian/ unstable/main libhogweed4 amd64 3.1.1-4 [136 kB] Get: 3 http://ftp.de.debian.org/debian/ unstable/main libp11-kit0 amd64 0.23.1-3 [112 kB] Get: 4 http://ftp.de.debian.org/debian/ unstable/main libtasn1-6 amd64 4.5-2 [49.6 kB] Get: 5 http://ftp.de.debian.org/debian/ unstable/main libgnutls-deb0-28 amd64 3.3.17-1 [716 kB] Get: 6 http://ftp.de.debian.org/debian/ unstable/main libsasl2-modules-db amd64 2.1.26.dfsg1-13 [67.0 kB] Get: 7 http://ftp.de.debian.org/debian/ unstable/main libsasl2-2 amd64 2.1.26.dfsg1-13 [104 kB] Get: 8 http://ftp.de.debian.org/debian/ unstable/main libldap-2.4-2 amd64 2.4.42+dfsg-1 [223 kB] Get: 9 http://ftp.de.debian.org/debian/ unstable/main libpython2.7-minimal amd64 2.7.10-3 [382 kB] Get: 10 http://ftp.de.debian.org/debian/ unstable/main python2.7-minimal amd64 2.7.10-3 [1418 kB] Get: 11 http://ftp.de.debian.org/debian/ unstable/main python-minimal amd64 2.7.9-1 [40.3 kB] Get: 12 http://ftp.de.debian.org/debian/ unstable/main mime-support all 3.59 [36.4 kB] Get: 13 http://ftp.de.debian.org/debian/ unstable/main libexpat1 amd64 2.1.0-7 [80.0 kB] Get: 14 http://ftp.de.debian.org/debian/ unstable/main libssl1.0.0 amd64 1.0.2d-1 [1274 kB] Get: 15 http://ftp.de.debian.org/debian/ unstable/main libpython2.7-stdlib amd64 2.7.10-3 [1854 kB] Get: 16 http://ftp.de.debian.org/debian/ unstable/main python2.7 amd64 2.7.10-3 [258 kB] Get: 17 http://ftp.de.debian.org/debian/ unstable/main libpython-stdlib amd64 2.7.9-1 [19.5 kB] Get: 18 http://ftp.de.debian.org/debian/ unstable/main python amd64 2.7.9-1 [151 kB] Get: 19 http://ftp.de.debian.org/debian/ unstable/main fonts-lato all 2.0-1 [2684 kB] Get: 20 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 amd64 5.2.1-16 [253 kB] Get: 21 http://ftp.de.debian.org/debian/ unstable/main libpython2.7 amd64 2.7.10-3 [1083 kB] Get: 22 http://ftp.de.debian.org/debian/ unstable/main libexpat1-dev amd64 2.1.0-7 [126 kB] Get: 23 http://ftp.de.debian.org/debian/ unstable/main libpython2.7-dev amd64 2.7.10-3 [18.7 MB] Get: 24 http://ftp.de.debian.org/debian/ unstable/main libssh2-1 amd64 1.5.0-2+b1 [133 kB] Get: 25 http://ftp.de.debian.org/debian/ unstable/main sgml-base all 1.26+nmu4 [14.6 kB] Get: 26 http://ftp.de.debian.org/debian/ unstable/main libkeyutils1 amd64 1.5.9-7 [12.2 kB] Get: 27 http://ftp.de.debian.org/debian/ unstable/main libkrb5support0 amd64 1.13.2+dfsg-2 [59.8 kB] Get: 28 http://ftp.de.debian.org/debian/ unstable/main libk5crypto3 amd64 1.13.2+dfsg-2 [115 kB] Get: 29 http://ftp.de.debian.org/debian/ unstable/main libkrb5-3 amd64 1.13.2+dfsg-2 [308 kB] Get: 30 http://ftp.de.debian.org/debian/ unstable/main libgssapi-krb5-2 amd64 1.13.2+dfsg-2 [152 kB] Get: 31 http://ftp.de.debian.org/debian/ unstable/main libidn11 amd64 1.32-1 [171 kB] Get: 32 http://ftp.de.debian.org/debian/ unstable/main cython amd64 0.22.1-2 [1473 kB] Get: 33 http://ftp.de.debian.org/debian/ unstable/main xml-core all 0.13+nmu2 [24.2 kB] Get: 34 http://ftp.de.debian.org/debian/ unstable/main docutils-common all 0.12+dfsg-1 [185 kB] Get: 35 http://ftp.de.debian.org/debian/ unstable/main fonts-font-awesome all 4.3.0~dfsg-2 [437 kB] Get: 36 http://ftp.de.debian.org/debian/ unstable/main hdf5-helpers amd64 1.8.13+docs-15.1 [36.5 kB] Get: 37 http://ftp.de.debian.org/debian/ unstable/main libblas-common amd64 1.2.20110419-10 [8496 B] Get: 38 http://ftp.de.debian.org/debian/ unstable/main libblas3 amd64 1.2.20110419-10 [167 kB] Get: 39 http://ftp.de.debian.org/debian/ unstable/main librtmp1 amd64 2.4+20150115.gita107cef-1+b2 [60.1 kB] Get: 40 http://ftp.de.debian.org/debian/ unstable/main libcurl3-gnutls amd64 7.44.0-1 [264 kB] Get: 41 http://ftp.de.debian.org/debian/ unstable/main libcurl4-gnutls-dev amd64 7.44.0-1 [343 kB] Get: 42 http://ftp.de.debian.org/debian/ unstable/main libhdf5-8 amd64 1.8.13+docs-15.1 [1060 kB] Get: 43 http://ftp.de.debian.org/debian/ unstable/main libhdf5-cpp-8 amd64 1.8.13+docs-15.1 [118 kB] Get: 44 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev amd64 1:1.2.8.dfsg-2+b1 [206 kB] Get: 45 http://ftp.de.debian.org/debian/ unstable/main libjpeg62-turbo amd64 1:1.4.1-2 [126 kB] Get: 46 http://ftp.de.debian.org/debian/ unstable/main libjpeg62-turbo-dev amd64 1:1.4.1-2 [481 kB] Get: 47 http://ftp.de.debian.org/debian/ unstable/main libjpeg-dev all 1:1.4.1-2 [51.9 kB] Get: 48 http://ftp.de.debian.org/debian/ unstable/main libhdf5-dev amd64 1.8.13+docs-15.1 [5281 kB] Get: 49 http://ftp.de.debian.org/debian/ unstable/main libjs-jquery all 1.11.3+dfsg-3 [163 kB] Get: 50 http://ftp.de.debian.org/debian/ unstable/main libjs-underscore all 1.7.0~dfsg-1 [49.9 kB] Get: 51 http://ftp.de.debian.org/debian/ unstable/main libjs-sphinxdoc all 1.3.1-6 [53.0 kB] Get: 52 http://ftp.de.debian.org/debian/ unstable/main liblapack3 amd64 3.5.0-4 [1852 kB] Get: 53 http://ftp.de.debian.org/debian/ unstable/main libnetcdf7 amd64 1:4.4.0~rc2-1 [313 kB] Get: 54 http://ftp.de.debian.org/debian/ unstable/main libnetcdf-dev amd64 1:4.4.0~rc2-1 [71.7 kB] Get: 55 http://ftp.de.debian.org/debian/ unstable/main libnetcdfc7 amd64 1:4.1.3-7.2 [276 kB] Get: 56 http://ftp.de.debian.org/debian/ unstable/main libpython-dev amd64 2.7.9-1 [19.6 kB] Get: 57 http://ftp.de.debian.org/debian/ unstable/main libpython-all-dev amd64 2.7.9-1 [1008 B] Get: 58 http://ftp.de.debian.org/debian/ unstable/main python-all amd64 2.7.9-1 [996 B] Get: 59 http://ftp.de.debian.org/debian/ unstable/main python2.7-dev amd64 2.7.10-3 [279 kB] Get: 60 http://ftp.de.debian.org/debian/ unstable/main python-dev amd64 2.7.9-1 [1182 B] Get: 61 http://ftp.de.debian.org/debian/ unstable/main python-all-dev amd64 2.7.9-1 [1024 B] Get: 62 http://ftp.de.debian.org/debian/ unstable/main python-babel-localedata all 1.3+dfsg.1-5 [1933 kB] Get: 63 http://ftp.de.debian.org/debian/ unstable/main python-pkg-resources all 18.3.1-1 [99.4 kB] Get: 64 http://ftp.de.debian.org/debian/ unstable/main python-six all 1.9.0-5 [13.7 kB] Get: 65 http://ftp.de.debian.org/debian/ unstable/main python-tz all 2012c+dfsg-0.1 [31.9 kB] Get: 66 http://ftp.de.debian.org/debian/ unstable/main python-babel all 1.3+dfsg.1-5 [77.8 kB] Get: 67 http://ftp.de.debian.org/debian/ unstable/main python-roman all 2.0.0-1 [7898 B] Get: 68 http://ftp.de.debian.org/debian/ unstable/main python-docutils all 0.12+dfsg-1 [361 kB] Get: 69 http://ftp.de.debian.org/debian/ unstable/main python-markupsafe amd64 0.23-2 [15.6 kB] Get: 70 http://ftp.de.debian.org/debian/ unstable/main python-jinja2 all 2.8-1 [111 kB] Get: 71 http://ftp.de.debian.org/debian/ unstable/main python-numpy amd64 1:1.9.2-2 [1671 kB] Get: 72 http://ftp.de.debian.org/debian/ unstable/main python-scientific amd64 2.9.4-3 [156 kB] Get: 73 http://ftp.de.debian.org/debian/ unstable/main python-netcdf amd64 2.9.4-3 [29.7 kB] Get: 74 http://ftp.de.debian.org/debian/ unstable/main python-pygments all 2.0.1+dfsg-1.1 [481 kB] Get: 75 http://ftp.de.debian.org/debian/ unstable/main python-alabaster all 0.7.6-1 [15.9 kB] Get: 76 http://ftp.de.debian.org/debian/ unstable/main libjs-modernizr all 2.6.2+ds1-1 [71.3 kB] Get: 77 http://ftp.de.debian.org/debian/ unstable/main sphinx-rtd-theme-common all 0.1.8-2 [109 kB] Get: 78 http://ftp.de.debian.org/debian/ unstable/main python-sphinx-rtd-theme all 0.1.8-2 [14.0 kB] Get: 79 http://ftp.de.debian.org/debian/ unstable/main sphinx-common all 1.3.1-6 [320 kB] Get: 80 http://ftp.de.debian.org/debian/ unstable/main python-sphinx all 1.3.1-6 [352 kB] Fetched 50.2 MB in 2min 2s (409 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libnettle6:amd64. 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Setting up libpython-dev:amd64 (2.7.9-1) ... Setting up libpython-all-dev:amd64 (2.7.9-1) ... Setting up python-all (2.7.9-1) ... Setting up python2.7-dev (2.7.10-3) ... Setting up python-dev (2.7.9-1) ... Setting up python-all-dev (2.7.9-1) ... Setting up python-babel-localedata (1.3+dfsg.1-5) ... Setting up python-pkg-resources (18.3.1-1) ... Setting up python-six (1.9.0-5) ... Setting up python-tz (2012c+dfsg-0.1) ... Setting up python-babel (1.3+dfsg.1-5) ... update-alternatives: using /usr/bin/pybabel-python2 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python-roman (2.0.0-1) ... Setting up python-markupsafe (0.23-2) ... Setting up python-jinja2 (2.8-1) ... Setting up python-numpy (1:1.9.2-2) ... Setting up python-scientific (2.9.4-3) ... Setting up python-netcdf (2.9.4-3) ... Setting up python-pygments (2.0.1+dfsg-1.1) ... Setting up libjs-modernizr (2.6.2+ds1-1) ... Setting up sphinx-rtd-theme-common (0.1.8-2) ... Setting up python-sphinx-rtd-theme (0.1.8-2) ... Setting up sphinx-common (1.3.1-6) ... Processing triggers for sgml-base (1.26+nmu4) ... Setting up docutils-common (0.12+dfsg-1) ... Processing triggers for sgml-base (1.26+nmu4) ... Setting up python-docutils (0.12+dfsg-1) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python-alabaster (0.7.6-1) ... Setting up python-sphinx (1.3.1-6) ... Processing triggers for libc-bin (2.19-19) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... disorderfs is already the newest version. fakeroot is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Copying source file I: copying [mmtk_2.7.9-1.dsc] I: copying [./mmtk_2.7.9.orig.tar.gz] I: copying [./mmtk_2.7.9-1.debian.tar.gz] I: Extracting source gpgv: keyblock resource `/tmp/buildd/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sun Jun 16 00:36:17 2013 GMT+12 using DSA key ID A59B1171 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mmtk_2.7.9-1.dsc dpkg-source: info: extracting mmtk in mmtk-2.7.9 dpkg-source: info: unpacking mmtk_2.7.9.orig.tar.gz dpkg-source: info: unpacking mmtk_2.7.9-1.debian.tar.gz I: Building the package I: Running cd tmp/buildd/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" dpkg-buildpackage -us -uc -b -rfakeroot dpkg-buildpackage: source package mmtk dpkg-buildpackage: source version 2.7.9-1 dpkg-buildpackage: source distribution unstable dpkg-buildpackage: source changed by Picca Frédéric-Emmanuel dpkg-source --before-build mmtk-2.7.9 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean dh clean --with python2,sphinxdoc dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory '/tmp/buildd/mmtk-2.7.9' # remove the cpython generated files distributed by upstream rm -f Src/MMTK_trajectory_action.c Src/MMTK_energy_term.c Src/MMTK_trajectory_generator.c Src/MMTK_state_accessor.c Src/MMTK_restraints.c # remove .pyc files rm -f # remove the doc rm -rf build make[1]: Leaving directory '/tmp/buildd/mmtk-2.7.9' dh_clean rm -f debian/python-mmtk.substvars rm -f debian/python-mmtk.*.debhelper rm -rf debian/python-mmtk/ rm -rf debian/.debhelper/ rm -f debian/*.debhelper.log rm -f debian/files find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -f *-stamp debian/rules build dh build --with python2,sphinxdoc dh_testdir dh_auto_configure dh_auto_build python setup.py build --force Traceback (most recent call last): File "setup.py", line 66, in from Scientific import N File "/usr/lib/python2.7/dist-packages/Scientific/N.py", line 6, in from numpy.oldnumeric import * ImportError: No module named oldnumeric dh_auto_build: python setup.py build --force returned exit code 1 debian/rules:34: recipe for target 'build' failed make: *** [build] Error 1 dpkg-buildpackage: error: debian/rules build gave error exit status 2 E: Failed autobuilding of package I: unmounting /sys filesystem I: unmounting /dev/shm filesystem I: unmounting dev/pts filesystem I: unmounting run/shm filesystem I: unmounting proc filesystem I: cleaning the build env I: removing directory /var/cache/pbuilder/build//6283 and its subdirectories