[Debian-med-packaging] Bug#741288: seqan: FTBFS on many buildds due to RAM exhaustion

Cyril Brulebois kibi at debian.org
Mon Mar 10 20:06:51 UTC 2014


Source: seqan
Version: 1.4.1-3
Severity: serious
Justification: FTBFS

Hi,

it seems your package is eating too much RAM for breakfast:
| cd /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/core/apps/pair_align && /usr/bin/c++   -DSEQAN_ENABLE_TESTING=0 -DSEQAN_HAS_EXECINFO=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -W -Wall -Wno-long-long -fstrict-aliasing -Wstrict-aliasing -pedantic -Wno-variadic-macros -I/«PKGBUILDDIR»/core/include    -o CMakeFiles/pair_align.dir/pair_align.cpp.o -c /«PKGBUILDDIR»/core/apps/pair_align/pair_align.cpp
| virtual memory exhausted: Cannot allocate memory
| make[4]: *** [core/apps/pair_align/CMakeFiles/pair_align.dir/pair_align.cpp.o] Error 1

Only amd64, powerpc, and s390x builds are in the archive by now:
  https://buildd.debian.org/status/package.php?p=seqan&suite=sid

(FWIW, bowtie is missing builds accordingly:
  https://buildd.debian.org/status/package.php?p=bowtie&suite=sid
)

Mraw,
KiBi.



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